Dataset

RNA-seq of hepatocellular carcinoma xenografts established from needle biopsies

Dataset ID Technology Samples
EGAD00001004541 Illumina HiSeq 2500 61

Dataset Description

RNA-sequencing of human hepatocellular carcinoma biopsies (n=14), 44 HCC xenografts derived from 11 HCC biopsies and 3 lymphoma xenografts derived from 3 HCC biopsies. RNA-sequencing was performed using the TruSeq Stranded Total RNA Library Prep Kit with Ribo-Zero Gold (lllumina). SR126 sequencing was performed on an Illumina HiSeq 2500 using v4 SBS chemistry according to the manufacturer’s guidelines.

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

MERiC
Contact person: Markus H Heim
Email: markus [dot] heim [at] unibas [dot] ch
More details: EGAC00001000964

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