About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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PFA ependymoma study -RNA-seq data

RNA-seq fastq files for the 16 samples used in Michealraj et al. Cell 2020. The samples include PFA and ST ependymoma tissues, normal pediatric brain as control and PFA ependymoma lines.

Request Access

Details of the Data access policy for the PFA WGS and RNA-seq data from the Taylor lab.

For each dataset that requires access control, there is a corresponding Data Access Committee (DAC) who determine access permissions. Data access requests are reviewed by the relevant DAC, not by the EGA. If you need to request access to this data set, please contact Michael D. Taylor at mdtaylor@sickkids.ca or Craig Daniels at craig.daniels@sickkids.ca.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004312 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00003491679 fastq.gz 5.6 GB Report
EGAF00003491680 fastq.gz 5.7 GB Report
EGAF00003491681 fastq.gz 5.9 GB Report
EGAF00003491682 fastq.gz 6.2 GB Report
EGAF00003491683 fastq.gz 6.3 GB Report
EGAF00003491684 fastq.gz 6.4 GB Report
EGAF00003491685 fastq.gz 5.1 GB Report
EGAF00003491686 fastq.gz 5.3 GB Report
EGAF00003491687 fastq.gz 5.4 GB Report
EGAF00003491688 fastq.gz 5.4 GB Report
EGAF00003491689 gz 5.4 GB
EGAF00003491690 gz 5.4 GB
EGAF00003491691 gz 5.5 GB Report
EGAF00003491692 gz 5.7 GB
EGAF00003491693 gz 6.0 GB
EGAF00003491694 gz 6.3 GB Report
EGAF00003491695 gz 6.9 GB Report
EGAF00003491696 gz 7.2 GB Report
EGAF00003491697 gz 5.8 GB
EGAF00003491698 gz 6.0 GB Report
EGAF00003491699 gz 5.7 GB
EGAF00003491700 gz 6.0 GB
EGAF00003491701 gz 5.3 GB
EGAF00003491702 gz 5.5 GB Report
EGAF00003491703 gz 2.2 GB
EGAF00003491704 gz 2.2 GB
EGAF00003491705 gz 5.2 GB
EGAF00003491706 gz 5.4 GB Report
EGAF00003491707 gz 5.6 GB
EGAF00003491708 gz 5.9 GB
EGAF00003491709 fastq.gz 7.1 GB Report
EGAF00003491710 fastq.gz 7.4 GB Report
32 Files (181.0 GB)