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Somatic pathogenic variants in the normal mammary gland of sporadic breast cancer patients

This dataset contains .fastq files generated by targeted DNA sequencing of 542 cancer-associated and cadidate genes (52 individuals), and targeted duplex sequencing of PIK3CA and TP53 genes (4 individuals).

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In line with the Data Processing Agreement.

In line with the Data Processing Agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005698 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005687456 fastq.gz 755.2 MB
EGAF00005687457 fastq.gz 763.7 MB
EGAF00005687459 fastq.gz 567.4 MB
EGAF00005687460 fastq.gz 575.7 MB
EGAF00005687461 fastq.gz 798.0 MB
EGAF00005687462 fastq.gz 803.4 MB
EGAF00005687463 fastq.gz 609.8 MB
EGAF00005687464 fastq.gz 627.3 MB
EGAF00005687465 fastq.gz 645.1 MB
EGAF00005687466 fastq.gz 659.4 MB
EGAF00005687467 fastq.gz 623.8 MB
EGAF00005687468 fastq.gz 634.7 MB
EGAF00005687469 fastq.gz 369.0 MB
EGAF00005687470 fastq.gz 398.3 MB
EGAF00005687471 fastq.gz 160.4 MB
EGAF00005687472 fastq.gz 162.9 MB
EGAF00005687473 fastq.gz 626.3 MB
EGAF00005687474 fastq.gz 636.7 MB
EGAF00005687475 fastq.gz 893.8 MB
EGAF00005687476 fastq.gz 908.8 MB
EGAF00005687477 fastq.gz 754.6 MB
EGAF00005687478 fastq.gz 769.8 MB
EGAF00005687479 fastq.gz 365.0 MB
EGAF00005687480 fastq.gz 372.3 MB
EGAF00005687481 fastq.gz 788.2 MB
EGAF00005687482 fastq.gz 803.9 MB
EGAF00005687483 fastq.gz 886.5 MB
EGAF00005687484 fastq.gz 902.8 MB
EGAF00005687485 fastq.gz 729.8 MB
EGAF00005687486 fastq.gz 743.2 MB
EGAF00005687487 fastq.gz 794.0 MB
EGAF00005687488 fastq.gz 818.3 MB
EGAF00005687489 fastq.gz 771.2 MB
EGAF00005687490 fastq.gz 787.7 MB
EGAF00005687491 fastq.gz 850.2 MB
EGAF00005687492 fastq.gz 865.4 MB
EGAF00005687493 fastq.gz 718.3 MB
EGAF00005687494 fastq.gz 728.8 MB
EGAF00005687495 fastq.gz 679.9 MB
EGAF00005687496 fastq.gz 689.3 MB
EGAF00005687497 fastq.gz 640.5 MB
EGAF00005687498 fastq.gz 684.8 MB
EGAF00005687499 fastq.gz 647.7 MB
EGAF00005687500 fastq.gz 664.8 MB
EGAF00005687501 fastq.gz 539.1 MB
EGAF00005687502 fastq.gz 584.5 MB
EGAF00005687503 fastq.gz 835.3 MB
EGAF00005687504 fastq.gz 869.1 MB
EGAF00005687505 fastq.gz 824.9 MB
EGAF00005687506 fastq.gz 839.7 MB
EGAF00005687507 fastq.gz 594.6 MB
EGAF00005687508 fastq.gz 661.4 MB
EGAF00005687509 fastq.gz 724.8 MB
EGAF00005687510 fastq.gz 737.7 MB
EGAF00005687511 fastq.gz 5.2 GB
EGAF00005687512 fastq.gz 5.7 GB
EGAF00005687513 fastq.gz 735.1 MB
EGAF00005687514 fastq.gz 749.7 MB
EGAF00005687515 fastq.gz 3.6 GB
EGAF00005687516 fastq.gz 4.0 GB
EGAF00005687517 fastq.gz 4.1 GB
EGAF00005687518 fastq.gz 4.7 GB
EGAF00005687519 fastq.gz 446.1 MB
EGAF00005687520 fastq.gz 456.3 MB
EGAF00005687521 fastq.gz 5.4 GB
EGAF00005687522 fastq.gz 6.1 GB
EGAF00005687523 fastq.gz 539.2 MB
EGAF00005687524 fastq.gz 548.5 MB
EGAF00005687525 fastq.gz 641.3 MB
EGAF00005687526 fastq.gz 656.6 MB
EGAF00005687527 fastq.gz 913.2 MB
EGAF00005687528 fastq.gz 924.6 MB
EGAF00005687529 fastq.gz 765.3 MB
EGAF00005687530 fastq.gz 780.6 MB
EGAF00005687531 fastq.gz 920.9 MB
EGAF00005687532 fastq.gz 944.9 MB
EGAF00005687533 fastq.gz 761.0 MB
EGAF00005687534 fastq.gz 775.3 MB
EGAF00005687535 fastq.gz 706.2 MB
EGAF00005687536 fastq.gz 717.4 MB
EGAF00005687537 fastq.gz 506.9 MB
EGAF00005687538 fastq.gz 518.3 MB
EGAF00005687539 fastq.gz 583.8 MB
EGAF00005687540 fastq.gz 600.6 MB
EGAF00005687541 fastq.gz 495.4 MB
EGAF00005687542 fastq.gz 506.6 MB
EGAF00005687543 fastq.gz 241.5 MB
EGAF00005687544 fastq.gz 248.1 MB
EGAF00005687545 fastq.gz 479.0 MB
EGAF00005687546 fastq.gz 493.0 MB
EGAF00005687547 fastq.gz 593.9 MB
EGAF00005687548 fastq.gz 614.1 MB
EGAF00005687549 fastq.gz 383.8 MB
EGAF00005687550 fastq.gz 404.3 MB
EGAF00005687551 fastq.gz 804.0 MB
EGAF00005687552 fastq.gz 826.1 MB
EGAF00005687553 fastq.gz 578.6 MB
EGAF00005687554 fastq.gz 613.3 MB
EGAF00005687555 fastq.gz 797.0 MB
EGAF00005687556 fastq.gz 831.4 MB
EGAF00005687557 fastq.gz 656.1 MB
EGAF00005687558 fastq.gz 793.1 MB
EGAF00005687559 fastq.gz 621.3 MB
EGAF00005687560 fastq.gz 665.2 MB
EGAF00005687561 fastq.gz 602.6 MB
EGAF00005687562 fastq.gz 614.6 MB
EGAF00005687563 fastq.gz 664.8 MB
EGAF00005687564 fastq.gz 682.9 MB
EGAF00005687565 fastq.gz 545.0 MB
EGAF00005687566 fastq.gz 556.5 MB
EGAF00005687567 fastq.gz 691.4 MB
EGAF00005687568 fastq.gz 703.5 MB
EGAF00005687569 fastq.gz 79.2 MB
EGAF00005687570 fastq.gz 81.8 MB
EGAF00005687571 fastq.gz 766.1 MB
EGAF00005687572 fastq.gz 780.3 MB
EGAF00005687573 fastq.gz 835.7 MB
EGAF00005687574 fastq.gz 890.7 MB
EGAF00005687575 fastq.gz 917.3 MB
EGAF00005687576 fastq.gz 941.7 MB
EGAF00005687577 fastq.gz 838.4 MB
EGAF00005687578 fastq.gz 863.7 MB
EGAF00005687579 fastq.gz 635.4 MB
EGAF00005687580 fastq.gz 647.7 MB
EGAF00005687581 fastq.gz 96.0 MB
EGAF00005687582 fastq.gz 98.9 MB
EGAF00005687583 fastq.gz 602.4 MB
EGAF00005687584 fastq.gz 614.4 MB
EGAF00005687585 fastq.gz 827.9 MB
EGAF00005687586 fastq.gz 851.1 MB
EGAF00005687587 fastq.gz 790.6 MB
EGAF00005687588 fastq.gz 814.2 MB
EGAF00005687589 fastq.gz 449.3 MB
EGAF00005687590 fastq.gz 455.6 MB
EGAF00005687591 fastq.gz 675.6 MB
EGAF00005687592 fastq.gz 691.3 MB
EGAF00005687593 fastq.gz 823.3 MB
EGAF00005687594 fastq.gz 839.9 MB
EGAF00005687595 fastq.gz 676.1 MB
EGAF00005687596 fastq.gz 694.4 MB
EGAF00005687597 fastq.gz 952.0 MB
EGAF00005687598 fastq.gz 975.9 MB
EGAF00005687599 fastq.gz 951.6 MB
EGAF00005687600 fastq.gz 981.2 MB
EGAF00005687601 fastq.gz 896.5 MB
EGAF00005687602 fastq.gz 913.4 MB
EGAF00005687603 fastq.gz 968.4 MB
EGAF00005687604 fastq.gz 989.9 MB
EGAF00005687605 fastq.gz 1.1 GB
EGAF00005687606 fastq.gz 1.1 GB
EGAF00005687607 fastq.gz 1.1 GB
EGAF00005687608 fastq.gz 1.1 GB
EGAF00005687609 fastq.gz 982.4 MB
EGAF00005687610 fastq.gz 1.0 GB
EGAF00005687611 fastq.gz 1.0 GB
EGAF00005687612 fastq.gz 1.1 GB
EGAF00005687613 fastq.gz 881.5 MB
EGAF00005687614 fastq.gz 898.8 MB
EGAF00005687615 fastq.gz 968.5 MB
EGAF00005687616 fastq.gz 989.8 MB
EGAF00005687617 fastq.gz 909.0 MB
EGAF00005687618 fastq.gz 928.5 MB
EGAF00005687619 fastq.gz 948.4 MB
EGAF00005687620 fastq.gz 967.6 MB
EGAF00005687621 fastq.gz 7.0 GB
EGAF00005687622 fastq.gz 7.9 GB
EGAF00005687623 fastq.gz 1.1 GB
EGAF00005687624 fastq.gz 1.1 GB
EGAF00005687625 fastq.gz 3.9 GB
EGAF00005687626 fastq.gz 4.4 GB
EGAF00005687627 fastq.gz 7.5 GB
EGAF00005687628 fastq.gz 8.5 GB
EGAF00005687629 fastq.gz 1.1 GB
EGAF00005687630 fastq.gz 1.1 GB
EGAF00005687631 fastq.gz 5.7 GB
EGAF00005687632 fastq.gz 6.4 GB
EGAF00005687633 fastq.gz 789.3 MB
EGAF00005687634 fastq.gz 810.1 MB
EGAF00005687635 fastq.gz 636.8 MB
EGAF00005687636 fastq.gz 643.2 MB
EGAF00005687637 fastq.gz 724.1 MB
EGAF00005687638 fastq.gz 744.5 MB
EGAF00005687639 fastq.gz 740.9 MB
EGAF00005687640 fastq.gz 765.4 MB
EGAF00005687641 fastq.gz 1.7 GB
EGAF00005687642 fastq.gz 1.7 GB
EGAF00005687643 fastq.gz 644.6 MB
EGAF00005687644 fastq.gz 678.7 MB
EGAF00005687645 fastq.gz 543.0 MB
EGAF00005687646 fastq.gz 558.8 MB
EGAF00005687647 fastq.gz 405.8 MB
EGAF00005687648 fastq.gz 413.2 MB
EGAF00005687649 fastq.gz 493.3 MB
EGAF00005687650 fastq.gz 507.4 MB
EGAF00005687651 fastq.gz 511.1 MB
EGAF00005687652 fastq.gz 531.0 MB
EGAF00005687653 fastq.gz 542.5 MB
EGAF00005687654 fastq.gz 547.2 MB
EGAF00005687655 fastq.gz 582.7 MB
EGAF00005687656 fastq.gz 594.2 MB
EGAF00005687657 fastq.gz 633.1 MB
EGAF00005687658 fastq.gz 644.8 MB
EGAF00005687659 fastq.gz 598.9 MB
EGAF00005687660 fastq.gz 608.0 MB
EGAF00005687661 fastq.gz 591.6 MB
EGAF00005687662 fastq.gz 608.8 MB
EGAF00005687663 fastq.gz 699.9 MB
EGAF00005687664 fastq.gz 705.1 MB
EGAF00005687665 fastq.gz 522.3 MB
EGAF00005687666 fastq.gz 532.4 MB
EGAF00005687667 fastq.gz 596.3 MB
EGAF00005687668 fastq.gz 605.9 MB
EGAF00005687669 fastq.gz 791.9 MB
EGAF00005687670 fastq.gz 811.9 MB
EGAF00005687671 fastq.gz 438.3 MB
EGAF00005687672 fastq.gz 446.6 MB
EGAF00005687673 fastq.gz 476.3 MB
EGAF00005687674 fastq.gz 486.3 MB
EGAF00005687675 fastq.gz 622.4 MB
EGAF00005687676 fastq.gz 637.3 MB
EGAF00005687677 fastq.gz 558.1 MB
EGAF00005687678 fastq.gz 569.8 MB
EGAF00005687679 fastq.gz 933.8 MB
EGAF00005687680 fastq.gz 964.5 MB
EGAF00005687681 fastq.gz 501.6 MB
EGAF00005687682 fastq.gz 513.3 MB
EGAF00005687683 fastq.gz 539.8 MB
EGAF00005687684 fastq.gz 553.4 MB
EGAF00005687685 fastq.gz 466.6 MB
EGAF00005687686 fastq.gz 477.1 MB
EGAF00005687687 fastq.gz 619.4 MB
EGAF00005687688 fastq.gz 626.8 MB
EGAF00005687689 fastq.gz 524.8 MB
EGAF00005687690 fastq.gz 539.0 MB
EGAF00005687691 fastq.gz 539.1 MB
EGAF00005687692 fastq.gz 549.6 MB
EGAF00005687693 fastq.gz 607.9 MB
EGAF00005687694 fastq.gz 624.5 MB
EGAF00005687695 fastq.gz 547.4 MB
EGAF00005687696 fastq.gz 561.0 MB
EGAF00005687697 fastq.gz 374.6 MB
EGAF00005687698 fastq.gz 384.4 MB
EGAF00005687699 fastq.gz 606.7 MB
EGAF00005687700 fastq.gz 758.7 MB
EGAF00005687701 fastq.gz 608.2 MB
EGAF00005687702 fastq.gz 618.7 MB
EGAF00005687703 fastq.gz 319.8 MB
EGAF00005687704 fastq.gz 328.9 MB
EGAF00005687705 fastq.gz 745.9 MB
EGAF00005687706 fastq.gz 757.4 MB
EGAF00005687707 fastq.gz 414.8 MB
EGAF00005687708 fastq.gz 428.7 MB
EGAF00005687709 fastq.gz 494.3 MB
EGAF00005687710 fastq.gz 510.1 MB
EGAF00005687711 fastq.gz 141.3 MB
EGAF00005687712 fastq.gz 147.5 MB
EGAF00005687713 fastq.gz 649.7 MB
EGAF00005687714 fastq.gz 672.6 MB
EGAF00005687715 fastq.gz 629.9 MB
EGAF00005687716 fastq.gz 649.5 MB
EGAF00005687717 fastq.gz 621.1 MB
EGAF00005687718 fastq.gz 642.5 MB
EGAF00005687719 fastq.gz 904.7 MB
EGAF00005687720 fastq.gz 931.1 MB
EGAF00005687721 fastq.gz 662.7 MB
EGAF00005687722 fastq.gz 683.8 MB
EGAF00005687723 fastq.gz 560.7 MB
EGAF00005687724 fastq.gz 574.4 MB
EGAF00005687725 fastq.gz 546.4 MB
EGAF00005687726 fastq.gz 561.8 MB
EGAF00005687727 fastq.gz 691.6 MB
EGAF00005687728 fastq.gz 712.4 MB
EGAF00005687729 fastq.gz 617.4 MB
EGAF00005687730 fastq.gz 636.0 MB
EGAF00005687731 fastq.gz 633.4 MB
EGAF00005687732 fastq.gz 650.6 MB
EGAF00005687733 fastq.gz 552.6 MB
EGAF00005687734 fastq.gz 567.3 MB
EGAF00005687735 fastq.gz 585.1 MB
EGAF00005687736 fastq.gz 606.6 MB
EGAF00005687737 fastq.gz 764.2 MB
EGAF00005687738 fastq.gz 787.9 MB
EGAF00005687739 fastq.gz 672.1 MB
EGAF00005687740 fastq.gz 687.1 MB
EGAF00005687741 fastq.gz 621.5 MB
EGAF00005687742 fastq.gz 638.6 MB
EGAF00005687743 fastq.gz 645.0 MB
EGAF00005687744 fastq.gz 659.7 MB
EGAF00005687745 fastq.gz 621.6 MB
EGAF00005687746 fastq.gz 636.7 MB
EGAF00005687747 fastq.gz 536.4 MB
EGAF00005687748 fastq.gz 547.8 MB
EGAF00005687749 fastq.gz 496.3 MB
EGAF00005687750 fastq.gz 511.8 MB
EGAF00005687751 fastq.gz 584.4 MB
EGAF00005687752 fastq.gz 597.9 MB
EGAF00005687753 fastq.gz 658.4 MB
EGAF00005687754 fastq.gz 676.2 MB
EGAF00005687757 fastq.gz 707.5 MB
EGAF00005687758 fastq.gz 719.3 MB
EGAF00005687759 fastq.gz 596.9 MB
EGAF00005687760 fastq.gz 695.7 MB
EGAF00005687761 fastq.gz 687.7 MB
EGAF00005687762 fastq.gz 696.3 MB
EGAF00005687763 fastq.gz 610.0 MB
EGAF00005687764 fastq.gz 615.9 MB
EGAF00005687765 fastq.gz 775.8 MB
EGAF00005687766 fastq.gz 787.1 MB
EGAF00005687767 fastq.gz 5.4 GB
EGAF00005687768 fastq.gz 6.0 GB
EGAF00005687769 fastq.gz 584.7 MB
EGAF00005687770 fastq.gz 613.7 MB
EGAF00005687771 fastq.gz 3.3 GB
EGAF00005687772 fastq.gz 3.6 GB
EGAF00005687773 fastq.gz 5.2 GB
EGAF00005687774 fastq.gz 5.7 GB
EGAF00005687775 fastq.gz 606.0 MB
EGAF00005687776 fastq.gz 613.7 MB
EGAF00005687777 fastq.gz 6.3 GB
EGAF00005687778 fastq.gz 7.1 GB
EGAF00005687779 fastq.gz 594.4 MB
EGAF00005687780 fastq.gz 601.1 MB
EGAF00005687781 fastq.gz 2.2 GB
EGAF00005687782 fastq.gz 2.5 GB
EGAF00005687783 fastq.gz 673.4 MB
EGAF00005687784 fastq.gz 681.1 MB
EGAF00005687785 fastq.gz 1.5 GB
EGAF00005687786 fastq.gz 1.7 GB
EGAF00005687787 fastq.gz 2.3 GB
EGAF00005687788 fastq.gz 2.6 GB
EGAF00005687789 fastq.gz 804.4 MB
EGAF00005687790 fastq.gz 811.9 MB
EGAF00005687791 fastq.gz 2.6 GB
EGAF00005687792 fastq.gz 3.0 GB
EGAF00005687803 fastq.gz 843.7 MB
EGAF00005687804 fastq.gz 861.1 MB
336 Files (356.9 GB)