Whole genome sequencing data of high-grade serous ovarian cancer samples (set 11)
The dataset contains whole genome sequencing data of 23 high-grade serous carcinoma (HGSC) patients sequenced with Novoseq 6000. The 89 samples are either fresh frozen tumour samples or blood samples. The files provided are paired fastq files.
- 10/04/2024
- 89 samples
- DAC: EGAC00001001760
- Technology: Illumina NovaSeq 6000
DUO:0000007 version: 2019-01-07
disease specific research
This data use permission indicates that use is allowed provided it is related to the specified disease.
ModifiersMONDO:0004992
DUO:0000026 version: 2019-01-07
user specific restriction
This data use modifier indicates that use is limited to use by approved users.
DUO:0000027 version: 2019-01-07
project specific restriction
This data use modifier indicates that use is limited to use within an approved project.
DUO:0000028 version: 2019-01-07
institution specific restriction
This data use modifier indicates that use is limited to use within an approved institution.
The data can only be used for cancer research that is inline with the research areas delineated in the patient consent. These include cancer biomarkers, prognostic factors, mechanisms behind the tumor evolution during treatment and treatment options. The data can also be used for validation of studies published by the contributing consortia (MUPETFaasi2, HERCULES, CHEMORESPONSE).
The data can only be used for cancer research that is inline with the research areas delineated in the patient consent. These include cancer biomarkers, prognostic factors, mechanisms behind the tumor evolution during treatment and treatment options. The data can also be used for validation of studies published by the contributing consortia (MUPETFaasi2, HERCULES, CHEMORESPONSE). See link for full description
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001006775 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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|---|---|---|---|---|
| EGAF00008384241 | fq.gz | 58.8 GB | Report |
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| EGAF00008384248 | fq.gz | 55.8 GB | Report |
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| EGAF00008384267 | fq.gz | 44.7 GB | Report |
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| EGAF00008384272 | fq.gz | 46.5 GB | Report |
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| EGAF00008384289 | fq.gz | 1.3 GB | Report |
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| EGAF00008384292 | fq.gz | 1.4 GB | Report |
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| EGAF00008384299 | fq.gz | 44.4 GB |
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| EGAF00008384299 | fq.gz | 44.4 GB | Report |
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| EGAF00008384303 | fq.gz | 46.8 GB | Report |
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| EGAF00008384323 | fq.gz | 39.2 GB | Report |
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| EGAF00008384327 | fq.gz | 41.4 GB | Report |
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| EGAF00008384351 | fq.gz | 1.2 GB | Report |
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| EGAF00008384354 | fq.gz | 1.2 GB | Report |
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| EGAF00008384361 | fq.gz | 50.9 GB | Report |
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| EGAF00008384368 | fq.gz | 53.4 GB | Report |
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| EGAF00008384384 | fq.gz | 39.7 GB | Report |
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| EGAF00008384395 | fq.gz | 41.7 GB | Report |
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| EGAF00008384421 | fq.gz | 47.9 GB | Report |
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| EGAF00008384424 | fq.gz | 51.0 GB | Report |
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| EGAF00008384444 | fq.gz | 41.1 GB | Report |
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| EGAF00008384450 | fq.gz | 43.2 GB | Report |
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| EGAF00008384716 | fq.gz | 51.6 GB | Report |
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| EGAF00008384750 | fq.gz | 48.6 GB | Report |
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| EGAF00008385490 | fq.gz | 46.2 GB | Report |
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| EGAF00008385579 | fq.gz | 49.1 GB | Report |
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| EGAF00008386535 | fq.gz | 45.2 GB | Report |
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| EGAF00008386735 | fq.gz | 47.1 GB | Report |
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| EGAF00008387481 | fq.gz | 44.8 GB |
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| EGAF00008387481 | fq.gz | 44.8 GB | Report |
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| EGAF00008387625 | fq.gz | 47.2 GB | Report |
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| EGAF00008388535 | fq.gz | 46.4 GB | Report |
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| EGAF00008388958 | fq.gz | 49.2 GB | Report |
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| EGAF00008389232 | fq.gz | 2.8 GB | Report |
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| EGAF00008389249 | fq.gz | 2.7 GB | Report |
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| EGAF00008390089 | fq.gz | 39.7 GB |
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| EGAF00008390089 | fq.gz | 39.7 GB | Report |
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| EGAF00008390468 | fq.gz | 54.9 GB | Report |
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| EGAF00008390580 | fq.gz | 52.3 GB |
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| EGAF00008390580 | fq.gz | 52.3 GB | Report |
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| EGAF00008390843 | fq.gz | 41.4 GB | Report |
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| EGAF00008391202 | fq.gz | 45.8 GB | Report |
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| EGAF00008391389 | fq.gz | 483.4 MB | Report |
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| EGAF00008391415 | fq.gz | 45.6 GB | Report |
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| EGAF00008391480 | fq.gz | 48.5 GB | Report |
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| EGAF00008391545 | fq.gz | 465.9 MB | Report |
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| EGAF00008391546 | fq.gz | 43.3 GB | Report |
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| EGAF00008391659 | fq.gz | 45.7 GB | Report |
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| EGAF00008391660 | fq.gz | 48.3 GB | Report |
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| EGAF00008391661 | fq.gz | 43.2 GB | Report |
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| EGAF00008391673 | fq.gz | 41.5 GB | Report |
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| EGAF00008391675 | fq.gz | 316.6 MB | Report |
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| EGAF00008391676 | fq.gz | 333.6 MB | Report |
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| EGAF00008391677 | fq.gz | 40.0 GB |
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| EGAF00008391677 | fq.gz | 40.0 GB | Report |
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| EGAF00008391690 | fq.gz | 41.6 GB | Report |
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| EGAF00008391691 | fq.gz | 64.0 GB | Report |
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| EGAF00008391692 | fq.gz | 64.9 GB | Report |
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| EGAF00008391693 | fq.gz | 51.3 GB | Report |
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| EGAF00008391694 | fq.gz | 52.0 GB |
|
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| EGAF00008391694 | fq.gz | 52.0 GB | Report |
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| EGAF00008391695 | fq.gz | 2.7 GB | Report |
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| EGAF00008391696 | fq.gz | 2.8 GB | Report |
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| EGAF00008391697 | fq.gz | 44.5 GB |
|
|
| EGAF00008391697 | fq.gz | 44.5 GB | Report |
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| EGAF00008391698 | fq.gz | 46.7 GB | Report |
|
| EGAF00008391699 | fq.gz | 39.7 GB | Report |
|
| EGAF00008391700 | fq.gz | 41.4 GB |
|
|
| EGAF00008391700 | fq.gz | 41.3 GB | Report |
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| EGAF00008391701 | fq.gz | 42.4 GB | Report |
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| EGAF00008391702 | fq.gz | 44.7 GB | Report |
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| EGAF00008391703 | fq.gz | 49.9 GB | Report |
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| EGAF00008391704 | fq.gz | 52.7 GB | Report |
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| EGAF00008391705 | fq.gz | 2.4 GB | Report |
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| EGAF00008391706 | fq.gz | 2.5 GB | Report |
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| EGAF00008391707 | fq.gz | 55.0 GB | Report |
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| EGAF00008391708 | fq.gz | 56.1 GB | Report |
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| EGAF00008391709 | fq.gz | 40.3 GB | Report |
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| EGAF00008391710 | fq.gz | 42.4 GB | Report |
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| EGAF00008391711 | fq.gz | 47.7 GB | Report |
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| EGAF00008391712 | fq.gz | 50.4 GB | Report |
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| EGAF00008391713 | fq.gz | 46.1 GB | Report |
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| EGAF00008391714 | fq.gz | 48.9 GB | Report |
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| EGAF00008391724 | fq.gz | 48.4 GB | Report |
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| EGAF00008391726 | fq.gz | 51.0 GB | Report |
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| EGAF00008391739 | fq.gz | 44.7 GB | Report |
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| EGAF00008391743 | fq.gz | 46.8 GB | Report |
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| EGAF00008391757 | fq.gz | 48.8 GB | Report |
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| EGAF00008391760 | fq.gz | 47.8 GB | Report |
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| EGAF00008391771 | fq.gz | 44.4 GB | Report |
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| EGAF00008391772 | fq.gz | 41.9 GB | Report |
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| EGAF00008391788 | fq.gz | 49.7 GB | Report |
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| EGAF00008391792 | fq.gz | 52.0 GB |
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| EGAF00008391792 | fq.gz | 52.0 GB | Report |
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| EGAF00008391803 | fq.gz | 43.7 GB | Report |
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| EGAF00008391805 | fq.gz | 45.6 GB | Report |
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| EGAF00008391814 | fq.gz | 2.7 GB | Report |
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| EGAF00008391816 | fq.gz | 2.9 GB | Report |
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| EGAF00008391818 | fq.gz | 37.9 GB | Report |
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| EGAF00008391820 | fq.gz | 39.2 GB | Report |
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| EGAF00008391837 | fq.gz | 46.8 GB | Report |
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| EGAF00008391838 | fq.gz | 45.1 GB | Report |
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| EGAF00008391999 | fq.gz | 42.3 GB | Report |
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| EGAF00008392106 | fq.gz | 44.7 GB |
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| EGAF00008392106 | fq.gz | 44.7 GB | Report |
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| EGAF00008393009 | fq.gz | 47.7 GB | Report |
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| EGAF00008393083 | fq.gz | 52.5 GB |
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| EGAF00008393083 | fq.gz | 52.5 GB | Report |
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| EGAF00008394255 | fq.gz | 59.2 GB | Report |
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| EGAF00008394316 | fq.gz | 62.4 GB |
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| EGAF00008394316 | fq.gz | 62.3 GB | Report |
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| EGAF00008394449 | fq.gz | 386.2 MB | Report |
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| EGAF00008394450 | fq.gz | 403.5 MB | Report |
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| EGAF00008394454 | fq.gz | 40.8 GB | Report |
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| EGAF00008394457 | fq.gz | 42.1 GB | Report |
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| EGAF00008394470 | fq.gz | 41.4 GB | Report |
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| EGAF00008394474 | fq.gz | 40.1 GB | Report |
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| EGAF00008394484 | fq.gz | 2.5 GB | Report |
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| EGAF00008394486 | fq.gz | 2.6 GB | Report |
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| EGAF00008394493 | fq.gz | 47.0 GB | Report |
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| EGAF00008394496 | fq.gz | 48.2 GB | Report |
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| EGAF00008394505 | fq.gz | 39.0 GB | Report |
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| EGAF00008394506 | fq.gz | 40.1 GB | Report |
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| EGAF00008394520 | fq.gz | 44.1 GB | Report |
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| EGAF00008394522 | fq.gz | 45.8 GB | Report |
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| EGAF00008394537 | fq.gz | 46.0 GB | Report |
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| EGAF00008394538 | fq.gz | 47.7 GB | Report |
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| EGAF00008398325 | fq.gz | 42.7 GB |
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| EGAF00008398325 | fq.gz | 42.7 GB | Report |
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| EGAF00008398694 | fq.gz | 50.2 GB | Report |
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| EGAF00008398902 | fq.gz | 3.4 GB | Report |
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| EGAF00008399012 | fq.gz | 44.1 GB | Report |
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| EGAF00008399055 | fq.gz | 45.8 GB | Report |
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| EGAF00008399407 | fq.gz | 46.4 GB | Report |
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| EGAF00008400473 | fq.gz | 37.9 GB | Report |
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| EGAF00008400474 | fq.gz | 50.2 GB | Report |
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| EGAF00008400608 | fq.gz | 52.0 GB | Report |
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| EGAF00008400875 | fq.gz | 50.4 GB | Report |
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| EGAF00008401033 | fq.gz | 48.8 GB | Report |
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| EGAF00008401139 | fq.gz | 47.4 GB | Report |
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| EGAF00008401140 | fq.gz | 49.3 GB | Report |
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| EGAF00008401167 | fq.gz | 47.9 GB | Report |
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| EGAF00008401175 | fq.gz | 3.3 GB | Report |
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| EGAF00008401184 | fq.gz | 50.9 GB | Report |
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| EGAF00008401252 | fq.gz | 52.6 GB | Report |
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| EGAF00008401261 | fq.gz | 55.7 GB | Report |
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| EGAF00008401266 | fq.gz | 58.8 GB | Report |
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| EGAF00008401267 | fq.gz | 39.7 GB |
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| EGAF00008401267 | fq.gz | 39.7 GB | Report |
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| EGAF00008402313 | fq.gz | 1.0 GB | Report |
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| EGAF00008402332 | fq.gz | 44.2 GB |
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| EGAF00008402332 | fq.gz | 44.2 GB | Report |
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| EGAF00008402492 | fq.gz | 4.2 GB |
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| EGAF00008402492 | fq.gz | 4.2 GB | Report |
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| EGAF00008402554 | fq.gz | 46.6 GB | Report |
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| EGAF00008402556 | fq.gz | 40.5 GB | Report |
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| EGAF00008402604 | fq.gz | 56.9 GB | Report |
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| EGAF00008402644 | fq.gz | 1.1 GB | Report |
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| EGAF00008402820 | fq.gz | 3.0 GB | Report |
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| EGAF00008403030 | fq.gz | 40.5 GB | Report |
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| EGAF00008403076 | fq.gz | 4.4 GB |
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| EGAF00008403076 | fq.gz | 4.4 GB | Report |
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| EGAF00008403089 | fq.gz | 51.9 GB | Report |
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| EGAF00008403286 | fq.gz | 39.3 GB | Report |
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| EGAF00008403329 | fq.gz | 41.8 GB | Report |
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| EGAF00008403408 | fq.gz | 49.6 GB | Report |
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| EGAF00008403433 | fq.gz | 55.5 GB | Report |
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| EGAF00008403488 | fq.gz | 54.5 GB | Report |
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| EGAF00008403725 | fq.gz | 50.0 GB | Report |
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| EGAF00008403798 | fq.gz | 52.1 GB |
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| EGAF00008403798 | fq.gz | 52.0 GB | Report |
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| EGAF00008403882 | fq.gz | 3.1 GB | Report |
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| EGAF00008403922 | fq.gz | 52.1 GB | Report |
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| EGAF00008403935 | fq.gz | 47.1 GB | Report |
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| EGAF00008403987 | fq.gz | 1.2 GB | Report |
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| EGAF00008403995 | fq.gz | 51.0 GB | Report |
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| EGAF00008404003 | fq.gz | 49.2 GB | Report |
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| EGAF00008404054 | fq.gz | 38.9 GB | Report |
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| EGAF00008404137 | fq.gz | 52.3 GB | Report |
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| EGAF00008404303 | fq.gz | 40.3 GB | Report |
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| EGAF00008404331 | fq.gz | 39.1 GB | Report |
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| EGAF00008404366 | fq.gz | 54.8 GB |
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| EGAF00008404366 | fq.gz | 54.7 GB | Report |
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| EGAF00008404430 | fq.gz | 51.1 GB |
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| EGAF00008404430 | fq.gz | 51.1 GB | Report |
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| EGAF00008404434 | fq.gz | 44.7 GB | Report |
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| EGAF00008404456 | fq.gz | 49.1 GB |
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| EGAF00008404456 | fq.gz | 49.0 GB | Report |
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| EGAF00008404464 | fq.gz | 46.3 GB | Report |
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| EGAF00008404467 | fq.gz | 41.0 GB | Report |
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| EGAF00008404484 | fq.gz | 43.8 GB | Report |
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| EGAF00008404486 | fq.gz | 47.7 GB | Report |
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| EGAF00008404489 | fq.gz | 42.8 GB | Report |
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| EGAF00008404497 | fq.gz | 43.1 GB | Report |
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| EGAF00008404499 | fq.gz | 46.3 GB | Report |
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| EGAF00008404502 | fq.gz | 10.8 GB | Report |
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| EGAF00008404503 | fq.gz | 38.0 GB | Report |
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| EGAF00008404510 | fq.gz | 15.2 GB | Report |
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| EGAF00008404513 | fq.gz | 11.5 GB | Report |
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| EGAF00008404514 | fq.gz | 40.8 GB | Report |
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| EGAF00008404516 | fq.gz | 41.6 GB | Report |
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| EGAF00008404548 | fq.gz | 44.5 GB | Report |
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| EGAF00008404549 | fq.gz | 43.2 GB | Report |
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| EGAF00008404552 | fq.gz | 44.5 GB | Report |
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| EGAF00008404556 | fq.gz | 46.1 GB | Report |
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| EGAF00008404557 | fq.gz | 42.1 GB | Report |
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| EGAF00008404814 | fq.gz | 43.4 GB | Report |
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| EGAF00008404815 | fq.gz | 48.8 GB |
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| EGAF00008404815 | fq.gz | 48.8 GB | Report |
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| EGAF00008404825 | fq.gz | 52.7 GB | Report |
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| EGAF00008404837 | fq.gz | 42.9 GB | Report |
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| EGAF00008404847 | fq.gz | 1.3 GB | Report |
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| EGAF00008404876 | fq.gz | 45.3 GB | Report |
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| EGAF00008404927 | fq.gz | 43.9 GB | Report |
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| EGAF00008404929 | fq.gz | 45.4 GB | Report |
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| EGAF00008404932 | fq.gz | 46.9 GB | Report |
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| EGAF00008404936 | fq.gz | 42.0 GB |
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| EGAF00008404936 | fq.gz | 42.0 GB | Report |
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| EGAF00008404937 | fq.gz | 55.8 GB | Report |
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| EGAF00008404939 | fq.gz | 45.1 GB | Report |
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| EGAF00008404944 | fq.gz | 44.3 GB |
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| EGAF00008404944 | fq.gz | 44.3 GB | Report |
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| EGAF00008404945 | fq.gz | 58.7 GB | Report |
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| EGAF00008404948 | fq.gz | 50.8 GB | Report |
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| EGAF00008404950 | fq.gz | 48.6 GB | Report |
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| EGAF00008404953 | fq.gz | 15.9 GB |
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| EGAF00008404953 | fq.gz | 15.9 GB | Report |
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| EGAF00008404956 | fq.gz | 41.0 GB | Report |
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| EGAF00008404957 | fq.gz | 44.9 GB | Report |
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| EGAF00008404959 | fq.gz | 42.3 GB | Report |
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| EGAF00008404962 | fq.gz | 42.5 GB | Report |
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| EGAF00008404964 | fq.gz | 54.1 GB | Report |
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| EGAF00008404965 | fq.gz | 41.5 GB | Report |
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| EGAF00008404972 | fq.gz | 46.7 GB | Report |
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| EGAF00008404973 | fq.gz | 42.9 GB | Report |
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| EGAF00008404980 | fq.gz | 52.4 GB | Report |
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| EGAF00008404981 | fq.gz | 53.6 GB | Report |
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| EGAF00008404990 | fq.gz | 48.5 GB | Report |
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| 237 Files (9.5 TB) | ||||