Whole genome sequencing data of high-grade serous ovarian cancer samples (set 13)
The dataset contains whole genome sequencing data of 32 high-grade serous carcinoma (HGSC) patients sequenced with Novoseq 6000. The 82 samples are either fresh frozen tumour samples or blood samples. The files provided are paired fastq files.
- 30/04/2024
- 82 samples
- DAC: EGAC00001001760
- Technology: Illumina NovaSeq 6000
DUO:0000007 version: 2019-01-07
disease specific research
This data use permission indicates that use is allowed provided it is related to the specified disease.
ModifiersMONDO:0004992
DUO:0000026 version: 2019-01-07
user specific restriction
This data use modifier indicates that use is limited to use by approved users.
DUO:0000027 version: 2019-01-07
project specific restriction
This data use modifier indicates that use is limited to use within an approved project.
DUO:0000028 version: 2019-01-07
institution specific restriction
This data use modifier indicates that use is limited to use within an approved institution.
The data can only be used for cancer research that is inline with the research areas delineated in the patient consent. These include cancer biomarkers, prognostic factors, mechanisms behind the tumor evolution during treatment and treatment options. The data can also be used for validation of studies published by the contributing consortia (MUPETFaasi2, HERCULES, CHEMORESPONSE).
The data can only be used for cancer research that is inline with the research areas delineated in the patient consent. These include cancer biomarkers, prognostic factors, mechanisms behind the tumor evolution during treatment and treatment options. The data can also be used for validation of studies published by the contributing consortia (MUPETFaasi2, HERCULES, CHEMORESPONSE). See link for full description
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001006775 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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|---|---|---|---|---|
| EGAF00008422177 | fq.gz | 5.8 GB | Report |
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| EGAF00008422179 | fq.gz | 6.2 GB | Report |
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| EGAF00008422195 | fq.gz | 36.4 GB | Report |
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| EGAF00008422196 | fq.gz | 34.3 GB | Report |
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| EGAF00008422216 | fq.gz | 51.5 GB | Report |
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| EGAF00008422219 | fq.gz | 53.7 GB | Report |
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| EGAF00008422230 | fq.gz | 42.4 GB | Report |
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| EGAF00008422234 | fq.gz | 44.3 GB | Report |
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| EGAF00008422244 | fq.gz | 355.4 MB | Report |
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| EGAF00008422246 | fq.gz | 365.0 MB | Report |
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| EGAF00008422255 | fq.gz | 49.8 GB | Report |
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| EGAF00008422258 | fq.gz | 53.1 GB | Report |
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| EGAF00008422264 | fq.gz | 40.2 GB | Report |
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| EGAF00008422268 | fq.gz | 42.3 GB | Report |
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| EGAF00008422289 | fq.gz | 59.8 GB | Report |
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| EGAF00008422291 | fq.gz | 62.7 GB | Report |
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| EGAF00008422303 | fq.gz | 2.1 GB | Report |
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| EGAF00008422306 | fq.gz | 47.5 GB | Report |
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| EGAF00008422307 | fq.gz | 1.9 GB | Report |
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| EGAF00008422310 | fq.gz | 49.9 GB | Report |
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| EGAF00008422319 | fq.gz | 39.1 GB | Report |
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| EGAF00008422322 | fq.gz | 41.3 GB | Report |
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| EGAF00008422344 | fq.gz | 53.8 GB | Report |
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| EGAF00008422347 | fq.gz | 58.7 GB | Report |
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| EGAF00008422363 | fq.gz | 46.7 GB | Report |
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| EGAF00008422365 | fq.gz | 48.3 GB | Report |
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| EGAF00008422381 | fq.gz | 50.9 GB | Report |
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| EGAF00008422383 | fq.gz | 48.4 GB | Report |
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| EGAF00008422394 | fq.gz | 43.9 GB | Report |
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| EGAF00008422398 | fq.gz | 45.2 GB | Report |
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| EGAF00008422414 | fq.gz | 48.1 GB | Report |
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| EGAF00008422416 | fq.gz | 49.9 GB | Report |
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| EGAF00008422432 | fq.gz | 49.5 GB | Report |
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| EGAF00008422434 | fq.gz | 50.9 GB | Report |
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| EGAF00008422450 | fq.gz | 49.7 GB | Report |
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| EGAF00008422452 | fq.gz | 47.4 GB | Report |
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| EGAF00008422467 | fq.gz | 51.9 GB | Report |
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| EGAF00008422473 | fq.gz | 55.5 GB | Report |
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| EGAF00008422485 | fq.gz | 47.2 GB | Report |
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| EGAF00008422487 | fq.gz | 49.1 GB | Report |
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| EGAF00008422499 | fq.gz | 45.6 GB | Report |
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| EGAF00008422504 | fq.gz | 47.3 GB | Report |
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| EGAF00008422511 | fq.gz | 1.1 GB | Report |
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| EGAF00008422513 | fq.gz | 1.2 GB | Report |
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| EGAF00008422519 | fq.gz | 41.8 GB | Report |
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| EGAF00008422520 | fq.gz | 40.0 GB | Report |
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| EGAF00008422535 | fq.gz | 46.0 GB | Report |
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| EGAF00008422539 | fq.gz | 48.5 GB | Report |
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| EGAF00008422560 | fq.gz | 60.7 GB | Report |
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| EGAF00008422561 | fq.gz | 64.5 GB | Report |
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| EGAF00008422571 | fq.gz | 44.2 GB | Report |
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| EGAF00008422574 | fq.gz | 45.4 GB | Report |
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| EGAF00008422592 | fq.gz | 53.2 GB | Report |
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| EGAF00008422597 | fq.gz | 56.3 GB | Report |
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| EGAF00008422604 | fq.gz | 255.6 MB | Report |
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| EGAF00008422606 | fq.gz | 274.3 MB | Report |
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| EGAF00008422609 | fq.gz | 2.1 GB | Report |
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| EGAF00008422611 | fq.gz | 2.2 GB | Report |
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| EGAF00008422613 | fq.gz | 47.1 GB | Report |
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| EGAF00008422616 | fq.gz | 50.3 GB | Report |
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| EGAF00008422646 | fq.gz | 52.3 GB | Report |
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| EGAF00008422648 | fq.gz | 55.5 GB | Report |
|
| EGAF00008422661 | fq.gz | 44.6 GB | Report |
|
| EGAF00008422663 | fq.gz | 47.0 GB | Report |
|
| EGAF00008422675 | fq.gz | 42.1 GB | Report |
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| EGAF00008422677 | fq.gz | 43.6 GB | Report |
|
| EGAF00008422693 | fq.gz | 46.1 GB | Report |
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| EGAF00008422694 | fq.gz | 48.3 GB | Report |
|
| EGAF00008422710 | fq.gz | 51.5 GB | Report |
|
| EGAF00008422712 | fq.gz | 54.9 GB | Report |
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| EGAF00008422716 | fq.gz | 8.0 GB | Report |
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| EGAF00008422719 | fq.gz | 8.8 GB | Report |
|
| EGAF00008422732 | fq.gz | 4.6 GB | Report |
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| EGAF00008422734 | fq.gz | 4.7 GB | Report |
|
| EGAF00008422737 | fq.gz | 36.1 GB | Report |
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| EGAF00008422739 | fq.gz | 38.4 GB | Report |
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| EGAF00008422749 | fq.gz | 4.2 GB | Report |
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| EGAF00008422751 | fq.gz | 4.4 GB | Report |
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| EGAF00008422752 | fq.gz | 36.4 GB | Report |
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| EGAF00008422753 | fq.gz | 39.0 GB | Report |
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| EGAF00008422754 | fq.gz | 60.2 GB | Report |
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| EGAF00008422755 | fq.gz | 63.7 GB | Report |
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| EGAF00008422756 | fq.gz | 49.7 GB | Report |
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| EGAF00008422757 | fq.gz | 52.6 GB | Report |
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| EGAF00008422758 | fq.gz | 50.8 GB | Report |
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| EGAF00008422759 | fq.gz | 47.9 GB | Report |
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| EGAF00008422760 | fq.gz | 51.7 GB | Report |
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| EGAF00008422761 | fq.gz | 54.0 GB | Report |
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| EGAF00008422762 | fq.gz | 53.3 GB | Report |
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| EGAF00008422763 | fq.gz | 55.2 GB | Report |
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| EGAF00008422764 | fq.gz | 59.2 GB | Report |
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| EGAF00008422765 | fq.gz | 62.2 GB | Report |
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| EGAF00008422766 | fq.gz | 66.9 GB | Report |
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| EGAF00008422767 | fq.gz | 70.6 GB | Report |
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| EGAF00008422768 | fq.gz | 277.4 MB | Report |
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| EGAF00008422769 | fq.gz | 2.2 GB | Report |
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| EGAF00008422770 | fq.gz | 58.3 GB | Report |
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| EGAF00008422771 | fq.gz | 258.0 MB | Report |
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| EGAF00008422772 | fq.gz | 59.3 GB | Report |
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| EGAF00008422773 | fq.gz | 2.3 GB | Report |
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| EGAF00008422774 | fq.gz | 5.2 GB | Report |
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| EGAF00008422775 | fq.gz | 5.6 GB | Report |
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| EGAF00008422776 | fq.gz | 275.3 MB | Report |
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| EGAF00008422777 | fq.gz | 32.6 GB | Report |
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| EGAF00008422778 | fq.gz | 288.0 MB | Report |
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| EGAF00008422779 | fq.gz | 34.2 GB | Report |
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| EGAF00008422780 | fq.gz | 1.4 GB | Report |
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| EGAF00008422781 | fq.gz | 1.5 GB | Report |
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| EGAF00008422782 | fq.gz | 60.5 GB | Report |
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| EGAF00008422783 | fq.gz | 64.0 GB | Report |
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| EGAF00008422784 | fq.gz | 40.8 GB | Report |
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| EGAF00008422785 | fq.gz | 42.3 GB | Report |
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| EGAF00008422786 | fq.gz | 53.7 GB | Report |
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| EGAF00008422787 | fq.gz | 56.0 GB | Report |
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| EGAF00008422788 | fq.gz | 47.2 GB | Report |
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| EGAF00008422789 | fq.gz | 49.8 GB | Report |
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| EGAF00008422793 | fq.gz | 46.6 GB | Report |
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| EGAF00008422795 | fq.gz | 44.7 GB | Report |
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| EGAF00008422800 | fq.gz | 46.5 GB | Report |
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| EGAF00008422801 | fq.gz | 48.2 GB | Report |
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| EGAF00008422803 | fq.gz | 49.4 GB | Report |
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| EGAF00008422804 | fq.gz | 51.9 GB | Report |
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| EGAF00008422805 | fq.gz | 57.3 GB | Report |
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| EGAF00008422806 | fq.gz | 55.2 GB | Report |
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| EGAF00008422807 | fq.gz | 43.8 GB | Report |
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| EGAF00008422808 | fq.gz | 45.0 GB | Report |
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| EGAF00008422838 | fq.gz | 47.7 GB | Report |
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| EGAF00008422839 | fq.gz | 49.4 GB | Report |
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| EGAF00008422864 | fq.gz | 46.0 GB | Report |
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| EGAF00008422867 | fq.gz | 47.3 GB | Report |
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| EGAF00008422869 | fq.gz | 1.0 GB | Report |
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| EGAF00008422870 | fq.gz | 993.4 MB | Report |
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| EGAF00008422871 | fq.gz | 40.2 GB | Report |
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| EGAF00008422872 | fq.gz | 41.3 GB | Report |
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| EGAF00008422873 | fq.gz | 3.0 GB | Report |
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| EGAF00008422874 | fq.gz | 198.0 MB | Report |
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| EGAF00008422875 | fq.gz | 206.1 MB | Report |
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| EGAF00008422876 | fq.gz | 37.5 GB | Report |
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| EGAF00008422877 | fq.gz | 3.2 GB | Report |
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| EGAF00008422878 | fq.gz | 39.3 GB | Report |
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| EGAF00008422879 | fq.gz | 63.6 GB | Report |
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| EGAF00008422880 | fq.gz | 61.4 GB | Report |
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| EGAF00008422882 | fq.gz | 3.0 GB | Report |
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| EGAF00008422883 | fq.gz | 3.1 GB | Report |
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| EGAF00008422884 | fq.gz | 4.2 GB | Report |
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| EGAF00008422900 | fq.gz | 39.5 GB | Report |
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| EGAF00008422902 | fq.gz | 38.2 GB | Report |
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| EGAF00008422903 | fq.gz | 43.4 GB | Report |
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| EGAF00008422904 | fq.gz | 39.5 GB | Report |
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| EGAF00008422905 | fq.gz | 270.2 MB | Report |
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| EGAF00008422906 | fq.gz | 280.5 MB | Report |
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| EGAF00008422907 | fq.gz | 41.4 GB | Report |
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| EGAF00008422908 | fq.gz | 40.2 GB | Report |
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| EGAF00008422910 | fq.gz | 46.5 GB | Report |
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| EGAF00008422912 | fq.gz | 43.4 GB | Report |
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| EGAF00008422913 | fq.gz | 41.3 GB | Report |
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| EGAF00008422914 | fq.gz | 47.7 GB | Report |
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| EGAF00008422916 | fq.gz | 44.9 GB | Report |
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| EGAF00008422917 | fq.gz | 47.5 GB | Report |
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| EGAF00008422919 | fq.gz | 45.2 GB | Report |
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| EGAF00008422921 | fq.gz | 49.7 GB | Report |
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| EGAF00008422922 | fq.gz | 53.2 GB | Report |
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| EGAF00008422923 | fq.gz | 47.1 GB | Report |
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| EGAF00008422926 | fq.gz | 49.5 GB | Report |
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| EGAF00008422927 | fq.gz | 37.6 GB | Report |
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| EGAF00008422929 | fq.gz | 41.3 GB | Report |
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| EGAF00008422931 | fq.gz | 45.6 GB | Report |
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| EGAF00008422933 | fq.gz | 72.8 GB | Report |
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| EGAF00008422934 | fq.gz | 46.7 GB | Report |
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| EGAF00008422935 | fq.gz | 50.6 GB | Report |
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| EGAF00008422936 | fq.gz | 4.0 GB | Report |
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| EGAF00008422937 | fq.gz | 47.5 GB | Report |
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| EGAF00008422938 | fq.gz | 69.4 GB | Report |
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| EGAF00008422939 | fq.gz | 49.2 GB | Report |
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| EGAF00008422940 | fq.gz | 54.4 GB | Report |
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| EGAF00008422941 | fq.gz | 56.6 GB | Report |
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| EGAF00008423218 | fq.gz | 47.4 GB | Report |
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| EGAF00008423219 | fq.gz | 45.3 GB | Report |
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| EGAF00008423220 | fq.gz | 603.0 MB | Report |
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| EGAF00008423221 | fq.gz | 648.1 MB | Report |
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| EGAF00008423222 | fq.gz | 46.3 GB | Report |
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| EGAF00008423223 | fq.gz | 48.1 GB | Report |
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| EGAF00008423224 | fq.gz | 965.5 MB | Report |
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| EGAF00008423225 | fq.gz | 1.0 GB | Report |
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| EGAF00008423226 | fq.gz | 40.6 GB | Report |
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| EGAF00008423227 | fq.gz | 41.7 GB | Report |
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| EGAF00008423228 | fq.gz | 56.9 GB | Report |
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| EGAF00008423229 | fq.gz | 59.0 GB | Report |
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| EGAF00008423230 | fq.gz | 1.2 GB | Report |
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| EGAF00008423231 | fq.gz | 1.2 GB | Report |
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| EGAF00008423232 | fq.gz | 210.1 MB | Report |
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| EGAF00008423233 | fq.gz | 217.0 MB | Report |
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| EGAF00008423234 | fq.gz | 60.2 GB | Report |
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| EGAF00008423235 | fq.gz | 65.6 GB | Report |
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| EGAF00008423236 | fq.gz | 2.5 GB | Report |
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| EGAF00008423237 | fq.gz | 2.7 GB | Report |
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| EGAF00008423238 | fq.gz | 37.9 GB | Report |
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| EGAF00008423239 | fq.gz | 38.8 GB | Report |
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| EGAF00008423240 | fq.gz | 565.0 MB | Report |
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| EGAF00008423241 | fq.gz | 608.1 MB | Report |
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| EGAF00008423242 | fq.gz | 55.8 GB | Report |
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| EGAF00008423243 | fq.gz | 58.2 GB | Report |
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| EGAF00008423244 | fq.gz | 1.3 GB | Report |
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| EGAF00008423245 | fq.gz | 1.4 GB | Report |
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| EGAF00008423246 | fq.gz | 40.1 GB | Report |
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| EGAF00008423247 | fq.gz | 41.4 GB | Report |
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| EGAF00008423248 | fq.gz | 58.6 GB | Report |
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| EGAF00008423249 | fq.gz | 61.2 GB | Report |
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| EGAF00008423251 | fq.gz | 50.1 GB | Report |
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| EGAF00008423252 | fq.gz | 52.1 GB | Report |
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| EGAF00008423253 | fq.gz | 47.7 GB | Report |
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| EGAF00008423254 | fq.gz | 49.7 GB | Report |
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| EGAF00008423255 | fq.gz | 49.3 GB | Report |
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| EGAF00008423256 | fq.gz | 52.0 GB | Report |
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| EGAF00008423945 | fq.gz | 38.3 GB | Report |
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| EGAF00008423946 | fq.gz | 40.9 GB | Report |
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| EGAF00008423947 | fq.gz | 34.2 GB | Report |
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| EGAF00008423948 | fq.gz | 36.3 GB | Report |
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| EGAF00008423949 | fq.gz | 49.5 GB | Report |
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| EGAF00008423950 | fq.gz | 51.8 GB | Report |
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| 220 Files (8.2 TB) | ||||