About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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RNA sequencing of Hedgehog-high and Hedgehog-low HPV-negative HNSCC tumors

RNA sequencing of Hedgehog-high and Hedgehog-low HPV-negative HNSCC tumors

Request Access

DUO:0000021
version: 2021-02-23

ethics approval required

This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.

DUO:0000042
version: 2021-02-23

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

CEITEC - CFBioIT

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001549 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000559735 fastq.gz 3.0 GB
EGAF50000559736 fastq.gz 3.5 GB
EGAF50000559737 fastq.gz 2.9 GB
EGAF50000559738 fastq.gz 3.0 GB
EGAF50000559739 fastq.gz 2.9 GB
EGAF50000559740 fastq.gz 3.1 GB
EGAF50000559741 fastq.gz 3.0 GB
EGAF50000559742 fastq.gz 2.7 GB
EGAF50000559743 fastq.gz 3.1 GB
EGAF50000559744 fastq.gz 3.2 GB
EGAF50000559745 fastq.gz 3.2 GB
EGAF50000559746 fastq.gz 3.0 GB
EGAF50000559849 tsv 2.7 MB
13 Files (36.6 GB)