About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Colossus Project Single-nuclei RNA sequencing

Single-nuclei RNA sequencing of human colorectal cancer samples. Nuclei were isolated on ice, followed by single-nuclei RNA-sequencing library preparation using the Chromium Single Cell 3’ reagent kit v3.1 (10x Genomics, Pleasanton, CA) Fastq files, N=18

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DUO:0000021
version: 2021-02-23

ethics approval required

This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.

Colossus Project Policy

Phenomic and multiomic characterisation of microsatellite-stable colorectal cancer reveals novel biology and targets of vulnerability

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000002087 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000959794 fastq.gz 9.4 GB
EGAF50000959795 fastq.gz 20.5 GB
EGAF50000959796 fastq.gz 4.4 GB
EGAF50000959797 fastq.gz 9.5 GB
EGAF50000959798 fastq.gz 9.7 GB
EGAF50000959799 fastq.gz 21.4 GB
EGAF50000959800 fastq.gz 9.2 GB
EGAF50000959801 fastq.gz 19.7 GB
EGAF50000959802 fastq.gz 9.1 GB
EGAF50000959803 fastq.gz 19.3 GB
EGAF50000959804 fastq.gz 10.0 GB
EGAF50000959805 fastq.gz 21.8 GB
EGAF50000959806 fastq.gz 8.8 GB
EGAF50000959807 fastq.gz 18.4 GB
EGAF50000959808 fastq.gz 8.9 GB
EGAF50000959809 fastq.gz 19.1 GB
EGAF50000959810 fastq.gz 10.1 GB
EGAF50000959811 fastq.gz 21.8 GB
EGAF50000959812 fastq.gz 3.9 GB
EGAF50000959813 fastq.gz 8.0 GB
EGAF50000959814 fastq.gz 8.4 GB
EGAF50000959815 fastq.gz 17.3 GB
EGAF50000959816 fastq.gz 6.3 GB
EGAF50000959817 fastq.gz 13.5 GB
EGAF50000959818 fastq.gz 4.8 GB
EGAF50000959819 fastq.gz 10.5 GB
EGAF50000959820 fastq.gz 4.8 GB
EGAF50000959821 fastq.gz 10.4 GB
EGAF50000959822 fastq.gz 2.9 GB
EGAF50000959823 fastq.gz 6.0 GB
EGAF50000959824 fastq.gz 3.9 GB
EGAF50000959825 fastq.gz 8.3 GB
EGAF50000959826 fastq.gz 5.5 GB
EGAF50000959827 fastq.gz 11.9 GB
EGAF50000959828 fastq.gz 7.2 GB
EGAF50000959829 fastq.gz 15.5 GB
36 Files (400.4 GB)