About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Bulk BCR and TCR repertoire sequencing from longitudinal dengue challenge samples

This dataset contains raw paired-end FASTQ files of bulk BCR/TCR adaptive immune receptor repertoire sequencing data from longitudinal whole-blood RNA samples collected during a controlled primary DENV3 human challenge study.

Request Access

DUO:0000007
version: 2021-02-23

disease specific research

This data use permission indicates that use is allowed provided it is related to the specified disease.

ModifiersMONDO:0005502 dengue disease

DUO:0000015
version: 2021-02-23

no general methods research

This data use modifier indicates that use does not allow methods development research (e.g., development of software or algorithms).

DUO:0000021
version: 2021-02-23

ethics approval required

This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.

DUO:0000027
version: 2021-02-23

project specific restriction

This data use modifier indicates that use is limited to use within an approved project.

DUO:0000028
version: 2021-02-23

institution specific restriction

This data use modifier indicates that use is limited to use within an approved institution.

VLAIO DenMark Project controlled access policy

Access to data from the VLAIO DenMark project “Use of multimodel omics technologies to study Dengue host response markers” is controlled by the VLAIO DenMark Project Data Access Committee. The project is a collaboration between Janssen Pharmaceutica NV, Universiteit Gent, and the Institute of Tropical Medicine Antwerp. Access may be granted to qualified researchers for scientifically justified research use related to dengue infection, host immune response, biomarker discovery, immunological profiling, or related biomedical research. Requests must include a clear research proposal, institutional affiliation, evidence of appropriate ethics approval where applicable, and confirmation that the proposed use is consistent with participant consent and applicable data protection requirements. Approved users must use the data only for the approved research purpose, maintain confidentiality, protect the data using appropriate technical and organisational safeguards, and comply with all applicable laws and institutional policies. Users may not attempt to identify or re-identify participants, may not link the data with other datasets for re-identification purposes, may not redistribute the data to unauthorised third parties, and may not use the data for purposes outside the approved project without renewed DAC approval. Any publication or public communication based on the data must acknowledge the VLAIO DenMark project and the contributing organisations where appropriate, and must not disclose information that could compromise participant privacy or confidentiality. Access may be withdrawn if users breach the approved terms of use.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000002195 Transcriptome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50001048237 fastq.gz 195.8 MB
EGAF50001048238 fastq.gz 264.1 MB
EGAF50001048239 fastq.gz 128.1 MB
EGAF50001048240 fastq.gz 172.8 MB
EGAF50001048241 fastq.gz 81.2 MB
EGAF50001048242 fastq.gz 136.5 MB
EGAF50001048243 fastq.gz 189.1 MB
EGAF50001048244 fastq.gz 89.6 MB
EGAF50001048245 fastq.gz 123.3 MB
EGAF50001048246 fastq.gz 173.3 MB
EGAF50001048247 fastq.gz 239.3 MB
EGAF50001048248 fastq.gz 100.6 MB
EGAF50001048249 fastq.gz 148.6 MB
EGAF50001048250 fastq.gz 88.2 MB
EGAF50001048251 fastq.gz 124.1 MB
EGAF50001048252 fastq.gz 102.9 MB
EGAF50001048253 fastq.gz 150.1 MB
EGAF50001048254 fastq.gz 169.7 MB
EGAF50001048255 fastq.gz 236.5 MB
EGAF50001048256 fastq.gz 119.3 MB
EGAF50001048257 fastq.gz 102.2 MB
EGAF50001048258 fastq.gz 147.3 MB
EGAF50001048259 fastq.gz 240.7 MB
EGAF50001048260 fastq.gz 95.9 MB
EGAF50001048261 fastq.gz 131.3 MB
EGAF50001048262 fastq.gz 56.7 MB
EGAF50001048263 fastq.gz 287.8 MB
EGAF50001048264 fastq.gz 78.0 MB
EGAF50001048265 fastq.gz 52.4 MB
EGAF50001048266 fastq.gz 77.4 MB
EGAF50001048267 fastq.gz 106.0 MB
EGAF50001048268 fastq.gz 149.2 MB
EGAF50001048269 fastq.gz 84.3 MB
EGAF50001048270 fastq.gz 117.1 MB
EGAF50001048271 fastq.gz 90.2 MB
EGAF50001048272 fastq.gz 121.6 MB
EGAF50001048273 fastq.gz 138.3 MB
EGAF50001048274 fastq.gz 190.1 MB
EGAF50001048275 fastq.gz 134.6 MB
EGAF50001048276 fastq.gz 384.5 MB
EGAF50001048277 fastq.gz 540.2 MB
EGAF50001048278 fastq.gz 173.0 MB
EGAF50001048279 fastq.gz 241.3 MB
EGAF50001048280 fastq.gz 200.3 MB
EGAF50001048281 fastq.gz 349.8 MB
EGAF50001048282 fastq.gz 154.9 MB
EGAF50001048283 fastq.gz 218.1 MB
EGAF50001048284 fastq.gz 288.1 MB
EGAF50001048285 fastq.gz 275.4 MB
EGAF50001048286 fastq.gz 395.0 MB
EGAF50001048287 fastq.gz 111.4 MB
EGAF50001048288 fastq.gz 156.1 MB
EGAF50001048289 fastq.gz 90.8 MB
EGAF50001048290 fastq.gz 124.3 MB
EGAF50001048291 fastq.gz 121.5 MB
EGAF50001048292 fastq.gz 169.9 MB
EGAF50001048293 fastq.gz 128.1 MB
EGAF50001048294 fastq.gz 180.0 MB
EGAF50001048295 fastq.gz 261.4 MB
EGAF50001048296 fastq.gz 376.7 MB
EGAF50001048297 fastq.gz 224.5 MB
EGAF50001048298 fastq.gz 313.1 MB
EGAF50001048299 fastq.gz 168.9 MB
EGAF50001048300 fastq.gz 234.6 MB
EGAF50001048301 fastq.gz 160.1 MB
EGAF50001048302 fastq.gz 221.8 MB
EGAF50001048303 fastq.gz 175.5 MB
EGAF50001048304 fastq.gz 254.0 MB
EGAF50001048305 fastq.gz 192.2 MB
EGAF50001048306 fastq.gz 229.1 MB
EGAF50001048307 fastq.gz 305.0 MB
EGAF50001048308 fastq.gz 442.5 MB
EGAF50001048309 fastq.gz 594.4 MB
EGAF50001048310 fastq.gz 559.4 MB
EGAF50001048311 fastq.gz 666.6 MB
EGAF50001048312 fastq.gz 612.2 MB
EGAF50001048313 fastq.gz 816.9 MB
EGAF50001048314 fastq.gz 237.0 MB
EGAF50001048315 fastq.gz 307.8 MB
EGAF50001048316 fastq.gz 239.7 MB
EGAF50001048317 fastq.gz 306.9 MB
EGAF50001048318 fastq.gz 478.2 MB
EGAF50001048319 fastq.gz 638.4 MB
EGAF50001048320 fastq.gz 46.3 MB
EGAF50001048321 fastq.gz 60.8 MB
EGAF50001048322 fastq.gz 39.0 MB
EGAF50001048323 fastq.gz 46.1 MB
EGAF50001048324 fastq.gz 124.3 MB
EGAF50001048325 fastq.gz 160.7 MB
EGAF50001048326 fastq.gz 204.5 MB
EGAF50001048327 fastq.gz 123.9 MB
EGAF50001048328 fastq.gz 473.2 MB
EGAF50001048329 fastq.gz 96.6 MB
EGAF50001048330 fastq.gz 1.0 GB
EGAF50001048331 fastq.gz 282.5 MB
EGAF50001048332 fastq.gz 1.5 GB
EGAF50001048333 fastq.gz 623.5 MB
EGAF50001048334 fastq.gz 904.0 MB
EGAF50001048335 fastq.gz 708.3 MB
EGAF50001048336 fastq.gz 1.0 GB
EGAF50001048337 fastq.gz 2.1 GB
EGAF50001048338 fastq.gz 2.9 GB
EGAF50001048339 fastq.gz 923.6 MB
EGAF50001048340 fastq.gz 1.3 GB
EGAF50001048341 fastq.gz 155.2 MB
EGAF50001048342 fastq.gz 138.2 MB
EGAF50001048343 fastq.gz 711.4 MB
EGAF50001048344 fastq.gz 164.3 MB
EGAF50001048345 fastq.gz 103.8 MB
EGAF50001048346 fastq.gz 144.5 MB
EGAF50001048347 fastq.gz 173.9 MB
EGAF50001048348 fastq.gz 238.6 MB
EGAF50001048349 fastq.gz 308.3 MB
EGAF50001048350 fastq.gz 447.9 MB
EGAF50001048351 fastq.gz 115.1 MB
EGAF50001048352 fastq.gz 122.8 MB
EGAF50001048353 fastq.gz 164.9 MB
EGAF50001048354 fastq.gz 96.5 MB
EGAF50001048355 fastq.gz 130.5 MB
EGAF50001048356 fastq.gz 210.7 MB
EGAF50001048357 fastq.gz 296.7 MB
EGAF50001048358 fastq.gz 93.5 MB
EGAF50001048359 fastq.gz 132.1 MB
EGAF50001048360 fastq.gz 167.6 MB
EGAF50001048361 fastq.gz 240.9 MB
EGAF50001048362 fastq.gz 170.1 MB
EGAF50001048363 fastq.gz 336.7 MB
EGAF50001048364 fastq.gz 215.3 MB
EGAF50001048365 fastq.gz 115.8 MB
EGAF50001048366 fastq.gz 158.9 MB
EGAF50001048367 fastq.gz 92.8 MB
EGAF50001048368 fastq.gz 178.5 MB
EGAF50001048369 fastq.gz 241.0 MB
EGAF50001048370 fastq.gz 168.5 MB
EGAF50001048371 fastq.gz 237.1 MB
EGAF50001048372 fastq.gz 255.1 MB
EGAF50001048373 fastq.gz 405.6 MB
EGAF50001048374 fastq.gz 460.1 MB
EGAF50001048375 fastq.gz 626.9 MB
EGAF50001048376 fastq.gz 296.1 MB
EGAF50001048377 fastq.gz 145.4 MB
EGAF50001048378 fastq.gz 203.6 MB
EGAF50001048379 fastq.gz 128.8 MB
EGAF50001048380 fastq.gz 179.8 MB
EGAF50001048381 fastq.gz 289.2 MB
EGAF50001048382 fastq.gz 413.0 MB
EGAF50001048383 fastq.gz 353.4 MB
EGAF50001048384 fastq.gz 471.0 MB
EGAF50001048385 fastq.gz 208.6 MB
EGAF50001048386 fastq.gz 285.4 MB
EGAF50001048387 fastq.gz 138.1 MB
EGAF50001048388 fastq.gz 59.6 MB
EGAF50001048389 fastq.gz 78.6 MB
EGAF50001048390 fastq.gz 262.9 MB
EGAF50001048391 fastq.gz 93.4 MB
EGAF50001048392 fastq.gz 123.1 MB
EGAF50001048393 fastq.gz 75.0 MB
EGAF50001048394 fastq.gz 103.2 MB
EGAF50001048395 fastq.gz 99.8 MB
EGAF50001048396 fastq.gz 140.5 MB
EGAF50001048397 fastq.gz 30.8 MB
EGAF50001048398 fastq.gz 43.6 MB
EGAF50001048399 fastq.gz 247.8 MB
EGAF50001048400 fastq.gz 368.4 MB
EGAF50001048401 fastq.gz 239.1 MB
EGAF50001048402 fastq.gz 345.0 MB
EGAF50001048403 fastq.gz 111.3 MB
EGAF50001048404 fastq.gz 155.7 MB
EGAF50001048405 fastq.gz 127.7 MB
EGAF50001048406 fastq.gz 180.5 MB
EGAF50001048407 fastq.gz 147.7 MB
EGAF50001048408 fastq.gz 210.2 MB
EGAF50001048409 fastq.gz 122.3 MB
EGAF50001048410 fastq.gz 164.8 MB
EGAF50001048411 fastq.gz 128.2 MB
EGAF50001048412 fastq.gz 179.0 MB
EGAF50001048413 fastq.gz 374.4 MB
EGAF50001048414 fastq.gz 577.6 MB
EGAF50001048415 fastq.gz 57.0 MB
EGAF50001048416 fastq.gz 77.7 MB
EGAF50001048417 fastq.gz 73.5 MB
EGAF50001048418 fastq.gz 105.5 MB
EGAF50001048419 fastq.gz 91.8 MB
EGAF50001048420 fastq.gz 134.3 MB
EGAF50001048421 fastq.gz 105.2 MB
EGAF50001048422 fastq.gz 148.8 MB
EGAF50001048423 fastq.gz 181.0 MB
EGAF50001048424 fastq.gz 59.4 MB
EGAF50001048425 fastq.gz 86.2 MB
EGAF50001048426 fastq.gz 174.9 MB
EGAF50001048427 fastq.gz 250.2 MB
EGAF50001048428 fastq.gz 117.1 MB
EGAF50001048429 fastq.gz 156.1 MB
EGAF50001048430 fastq.gz 155.5 MB
EGAF50001048431 fastq.gz 214.2 MB
EGAF50001048432 fastq.gz 105.9 MB
EGAF50001048433 fastq.gz 137.4 MB
EGAF50001048434 fastq.gz 128.5 MB
EGAF50001048435 fastq.gz 157.4 MB
EGAF50001048436 fastq.gz 314.1 MB
EGAF50001048437 fastq.gz 425.0 MB
EGAF50001048438 fastq.gz 129.2 MB
EGAF50001048439 fastq.gz 168.8 MB
EGAF50001048440 fastq.gz 231.2 MB
EGAF50001048441 fastq.gz 315.0 MB
EGAF50001048442 fastq.gz 493.2 MB
EGAF50001048443 fastq.gz 703.0 MB
EGAF50001048444 fastq.gz 263.5 MB
EGAF50001048445 fastq.gz 353.6 MB
EGAF50001048446 fastq.gz 381.0 MB
EGAF50001048447 fastq.gz 139.0 MB
EGAF50001048448 fastq.gz 196.8 MB
EGAF50001048449 fastq.gz 135.9 MB
EGAF50001048450 fastq.gz 183.1 MB
EGAF50001048451 fastq.gz 341.8 MB
EGAF50001048452 fastq.gz 475.0 MB
EGAF50001048453 fastq.gz 324.2 MB
EGAF50001048454 fastq.gz 456.6 MB
EGAF50001048455 fastq.gz 199.0 MB
EGAF50001048456 fastq.gz 46.4 MB
EGAF50001048457 fastq.gz 68.4 MB
EGAF50001048458 fastq.gz 109.1 MB
EGAF50001048459 fastq.gz 157.9 MB
EGAF50001048460 fastq.gz 282.3 MB
EGAF50001048461 fastq.gz 408.7 MB
EGAF50001048462 fastq.gz 200.1 MB
EGAF50001048463 fastq.gz 290.8 MB
EGAF50001048464 fastq.gz 68.2 MB
EGAF50001048465 fastq.gz 97.3 MB
EGAF50001048466 fastq.gz 107.7 MB
EGAF50001048467 fastq.gz 37.8 MB
EGAF50001048468 fastq.gz 54.7 MB
EGAF50001048469 fastq.gz 206.5 MB
EGAF50001048470 fastq.gz 102.4 MB
EGAF50001048471 fastq.gz 150.9 MB
EGAF50001048472 fastq.gz 422.2 MB
EGAF50001048473 fastq.gz 614.0 MB
EGAF50001048474 fastq.gz 74.7 MB
EGAF50001048475 fastq.gz 101.7 MB
EGAF50001048476 fastq.gz 160.7 MB
EGAF50001048477 fastq.gz 225.8 MB
EGAF50001048478 fastq.gz 125.3 MB
EGAF50001048479 fastq.gz 170.6 MB
EGAF50001048480 fastq.gz 437.0 MB
EGAF50001048481 fastq.gz 257.0 MB
EGAF50001048482 fastq.gz 357.5 MB
EGAF50001048483 fastq.gz 56.0 MB
EGAF50001048484 fastq.gz 77.5 MB
EGAF50001048485 fastq.gz 83.8 MB
EGAF50001048486 fastq.gz 125.6 MB
EGAF50001048487 fastq.gz 82.9 MB
EGAF50001048488 fastq.gz 125.9 MB
EGAF50001048489 fastq.gz 40.9 MB
EGAF50001048490 fastq.gz 64.3 MB
EGAF50001048491 fastq.gz 139.1 MB
EGAF50001048492 fastq.gz 209.7 MB
EGAF50001048493 fastq.gz 170.9 MB
EGAF50001048494 fastq.gz 248.1 MB
EGAF50001048495 fastq.gz 235.3 MB
EGAF50001048496 fastq.gz 346.0 MB
EGAF50001048497 fastq.gz 41.1 MB
EGAF50001048498 fastq.gz 57.7 MB
EGAF50001048499 fastq.gz 66.1 MB
EGAF50001048500 fastq.gz 94.3 MB
EGAF50001048501 fastq.gz 70.0 MB
EGAF50001048502 fastq.gz 77.6 MB
EGAF50001048503 fastq.gz 108.4 MB
EGAF50001048504 fastq.gz 190.7 MB
EGAF50001048505 fastq.gz 274.7 MB
EGAF50001048506 fastq.gz 173.9 MB
EGAF50001048507 fastq.gz 237.3 MB
EGAF50001048508 fastq.gz 120.0 MB
EGAF50001048509 fastq.gz 518.3 MB
EGAF50001048510 fastq.gz 734.9 MB
EGAF50001048511 fastq.gz 94.4 MB
EGAF50001048512 fastq.gz 132.5 MB
276 Files (68.6 GB)