Need Help?

VLAIO DenMark Project Data Access Committee

Contact Information

Dr Thomas-Wolf Verdonckt
twverdonckt@itg.be

Request Access

This DAC controls 4 datasets

Dataset ID	Description	Technology	Samples
EGAD50000002823	This dataset contains bulk BCR/IGH adaptive immune receptor repertoire sequencing data from longitudinal whole-blood RNA samples collected during a controlled primary DENV1 human challenge study. Raw paired-end FASTQ files are provided for available participant-timepoint samples, with associated processed clone-pass repertoire tables generated using the nf-core/airrflow/Immcantation workflow. The dataset includes samples from participants 201-209 across available days 0, 8, 10, 14, and 28, excluding missing participant-timepoints. The data support analysis of BCR clonal expansion, isotype usage, somatic hypermutation, and convergent antibody responses after dengue infection.	Element AVITI	43
EGAD50000003144	This dataset contains raw paired-end FASTQ files of bulk BCR/TCR adaptive immune receptor repertoire sequencing data from longitudinal whole-blood RNA samples collected during a controlled primary DENV3 human challenge study.	Element AVITI	138
EGAD50000003145	This dataset contains assembled bulk TCR adaptive immune receptor repertoires from longitudinal whole-blood RNA samples collected during a controlled primary DENV3 human challenge study. The data support analysis of TCR clonal expansion, and convergent receptor responses after dengue infection.	Element AVITI	138
EGAD50000003146	This dataset contains assembled bulk BCR/IGH adaptive immune receptor repertoires from longitudinal whole-blood RNA samples collected during a controlled primary DENV3 human challenge study. The data support analysis of BCR clonal expansion, isotype usage, somatic hypermutation, and convergent antibody responses after dengue infection.	Element AVITI	138