5500 results for "*oma"

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• RNASeq data for paper titled "Spatial Omics Resolves Adrenergic and Mesenchymal Cell States in Neuroblastoma"

  This dataset contains 219 RNASeq samples. The data is total stranded transcriptome sequencing using the TruSeq Stranded Total RNA library preparation kit.

  Dataset EGAD00001016790

• Nanopore Amplicon Sequencing of 34 uveal melanoma samples (33 patient tumors + 1 primary cell line) in 4 mutational hotspot regions for genotyping

  Sequencing of one mutational hotspot region in each of the genes GNA11, GNAQ, SF3B1 and SRSF2. 33 patient tumor samples and a primary cell line were analyzed, all uveal melanoma. Amplicons were generated in a PCR step followed by AMPure XP clean up. Amplicons were pooled equally per sample and sequenced for genotyping.

  Dataset EGAD50000003067

• WES dataset of mesothelioma CONFIRM study

  This dataset comprises 33 whole-exome sequencing (WES) samples from mesothelioma patients, including 18 tumor, 13 matched normal, and 2 relapsed samples.

  Dataset EGAD50000002621

• RNA sequencing dataset of mesothelioma CONFIRM study

  This dataset includes 27 RNA sequencing tumors from mesothelioma, of which two are derived from relapsed patients.

  Dataset EGAD50000002622

• Amplicon sequencing libraries from the study "Histological Transformation and Progression in Follicular Lymphoma: a Clonal Evolution Study".

  Amplicon sequencing libraries from the study "Histological Transformation and Progression in Follicular Lymphoma: a Clonal Evolution Study". These are Illumina amplicon deep sequencing libraries (n = 118) to validate somatic predictions made in the whole genome sequencing libraries. Specifically, there are 72 tumor libraries and 46 normal libraries. Some patients may have multiple amplicon libraries sequenced.

  Dataset EGAD00001002896

• Whole genome sequencing libraries from the study "Histological Transformation and Progression in Follicular Lymphoma: a Clonal Evolution Study".

  Whole genome sequencing libraries from the study "Histological Transformation and Progression in Follicular Lymphoma: a Clonal Evolution Study". These are libraries from 41 patients. Specifically: 15 transformed follicular lymphoma (TFL), 6 early progressers (PFL), and 20 non-early progressers (NPFL). For TFL and PFL patients, trios consisting of diagnostic (T1), transformed/progressed (T2) and a matching normal are available (n = 63 libaries in total). For NPFL patients, a tumor-normal pair are available (n = 40 libraries).

  Dataset EGAD00001002897

• Oliocapture sequencing libraries from the study "Histological Transformation and Progression in Follicular Lymphoma: a Clonal Evolution Study".

  Oliocapture sequencing libraries from the study "Histological Transformation and Progression in Follicular Lymphoma: a Clonal Evolution Study". These are sequencing libraries from the extension cohort of 277 patients. Specifically, there are 402 tumor libraries and 82 normal libraries.

  Dataset EGAD00001002898

• BLUEPRINT September 2016, ATAC-seq Multiple Myeloma for plasma cell from bone marrow, on Genome GRCh38

  ATAC-seq data for 4 sample(s) Multiple Myeloma for plasma cell from bone marrow, on Genome GRCh38. 4 run(s), 4 experiment(s), 4 alignment(s). Part of BLUEPRINT (September 2016).

  Dataset EGAD00001002920

• BLUEPRINT September 2016, ATAC-seq Mantle Cell Lymphoma from venous blood, on Genome GRCh38

  ATAC-seq data for 5 sample(s) Mantle Cell Lymphoma from venous blood, on Genome GRCh38. 5 run(s), 5 experiment(s), 5 alignment(s). Part of BLUEPRINT (September 2016).

  Dataset EGAD00001002918

• BLUEPRINT September 2016, ChIPmentation Germinal Center B-Cell-Like Diffuse Large B-Cell Lymphoma from lymph node, on Genome GRCh38

  ChIPmentation data for 2 sample(s) Germinal Center B-Cell-Like Diffuse Large B-Cell Lymphoma from lymph node, on Genome GRCh38. 6 run(s), 6 experiment(s), 6 alignment(s). Part of BLUEPRINT (September 2016).

  Dataset EGAD00001002946