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• WGS and WXS for mismatch repair-deficient human colon organoids

  Whole genome/exome sequencing to detect spontaneous acquired mutations in mismatch repair-deficient human colon organoids.

  Dataset EGAD50000000159

• GCAT| SNParray GSA TopMed

  2746 samples issued from GCAT cohort, genotyped with GSA Array, with data for Cr1-23. Plink files with QC and imputed using TOPMed.

  Dataset EGAD00010002758

• OncoScan SNP data set for systemic follicular lymphoma (sFL)

  122 unpaired initial tumor samples (122 FFPE samples) of sFL patients measured with OncoScan SNP microarrays, Affymetrix CEL intensity data file types (Thermo Fisher Scientific, Waltham, Massachusetts, USA)

  Dataset EGAD00010002592

• Hostage_1_genotype

  Cohort: Raw genotype files for Hostage1 cohort. Genotype Chip: Illumina’s (Illumina Inc., San Diego, U.S.) Global Screening Array-24 Multi Disease (GSA) Version 2.0 B1 genomic build: b37

  Dataset EGAD00010002180

• Richter Syndrome Methylation dataset

  Raw idat files for 90 RS + DLBCL + CLL samples.

  Dataset EGAD00010002194

• CML_CP_MBC_LBC_Illumina_ Beadchip_HT12v4_All_Samples_Gene_Expression.xlsx

  Expression dataset for CD34 sorted primary CML bone marrow samples

  Dataset EGAD00010002209

• Hostage_4_genotype

  Cohort: Raw genotype files for Hostage4 cohort. Genotype Chip: Illumina’s (Illumina Inc., San Diego, U.S.) Global Screening Array-24 Multi Disease (GSA) Version 2.0 B1 genomic build: b37

  Dataset EGAD00010002178

• Hostage_3_genotype

  Cohort: Raw genotype files for Hostage3 cohort. Genotype Chip: Illumina’s (Illumina Inc., San Diego, U.S.) Global Screening Array-24 Multi Disease (GSA) Version 2.0 B1 genomic build: b37

  Dataset EGAD00010002173

• Hostage_2_genotype

  Cohort: Raw genotype files for Hostage2 cohort. Genotype Chip: Illumina’s (Illumina Inc., San Diego, U.S.) Global Screening Array-24 Multi Disease (GSA) Version 2.0 B1 genomic build: b37

  Dataset EGAD00010002171

• Batch1_Genotypes_Raw

  Genotypes generated for Puno cohort Batch 1. Case (PRE) and control (PUN) families were recruited in hospital, and additional unrelated controls were recruited in university (UNA). Raw genotypes no QC.

  Dataset EGAD00010002126

• GCAT| SNParray coreSpain V1

  4988 samples issued from GCAT cohort, genotyped with MEGAex-Infinium Array, with data for Cr1-22. Plink files with QC but not imputed.

  Dataset EGAD00010001665

• PromethION (and Illumina) WGS and MinION transcriptome for a patient with diffuse large B-cell lymphoma.

  Dataset EGAD00001006204

• iPSC variation file (VCF) for EBiSC

  EBiSC Whole Genome Sequencing processed VCF including VEP consequences

  Dataset EGAD00001003934

• DATA FILES FOR BALL-PAX5-WES

  Dataset EGAD00001001056

• Whole exome sequencing of serially sampled TNBC patients on pre/on PARP inhibitor

  Novaseq whole exome raw sequence files (FastQ) for breast cancer tumor core biopsies and blood normal control.

  Dataset EGAD00001007916

• Raw sequencing data for PicoCNV and MutLX2 development papers

  Bulk tumour, germline and DigiPico WGS BAM files from patients 11611, 11615, 11619

  Dataset EGAD00001010302

• RNA-sequencing of cohesin-mutated and wildtype adult AMLs

  Transcriptomic data generated by RNA-sequencing for adult human AMLs with STAG2 or RAD21 mutations or no cohesin mutations (CTRL-AMLs).

  Dataset EGAD00001011197

• Whole genome sequencing of 78 follicular lymphoma tumours and matched normals

  Whole genome sequencing for tumour/normal matched pairs from 78 samples

  Dataset EGAD00001011343

• Primary Neuroblastoma Circle-seq Data

  Circle-seq data for 21 primary neuroblastoma samples supporting Koche et al. Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma (2020).

  Dataset EGAD00001006580

• APCDR AGV Project: Low depth (4x) sequence data from an Ugandan population (BAMs)

  Low depth (4x) Illumina HiSeq raw sequence data for 100 unrelated Baganda from rural Uganda.

  Dataset EGAD00001001008

• RNA sequencing for gastric cancer ascites

  Whole transcriptome sequencing (RNA-seq) was performed on 39 PC specimens. Among them, 21 specimens also had WES data.

  Dataset EGAD00001004365

• Rio Dataset

  Homologous recombination DNA repair deficiency and PARP inhibition activity in primary triple negative breast cancer. RNA-Seq data for paired baseline and end of treatment samples

  Dataset EGAD00001006120

• Single-cell RNA sequencing for metastatic gastric adenocarcinoma

  Single-cell RNA sequencing was performed on a total of 20 PC specimens.

  Dataset EGAD00001006172

• G3BP2-KIT drives leukemia amenable to kinase inhibition in Ph-like ALL

  G3BP2-KIT drives leukemia amenable to kinase inhibition in Ph-like ALL: RNAseq for human sample

  Dataset EGAD00001007564

• Single-cell atlas of the developing brain to investigate the cellular origins of pediatric brain tumors

  Study EGAS00001003368