3883 results for "RNA AND sequencing OR transcriptome"

in 12.29 milliseconds.

• SF6136

  RNA-exome

  Dataset EGAD00001006754

• SF11094

  RNA-exome

  Dataset EGAD00001006755

• SF10228

  RNA-exome

  Dataset EGAD00001006756

• SF11780

  RNA-exome

  Dataset EGAD00001006757

• SF12243

  RNA-exome

  Dataset EGAD00001006758

• SF9301

  RNA-exome

  Dataset EGAD00001006759

• SF6996

  RNA-exome

  Dataset EGAD00001006760

• SF10770

  RNA-exome

  Dataset EGAD00001006761

• SF7196

  RNA-exome

  Dataset EGAD00001006762

• SF11215

  RNA-exome

  Dataset EGAD00001006763

• SF8963

  RNA-exome

  Dataset EGAD00001006764

• SF10931

  RNA-exome

  Dataset EGAD00001006765

• SF4324

  RNA-exome

  Dataset EGAD00001006766

• SF10127

  RNA-exome

  Dataset EGAD00001006767

• SF4209

  RNA-exome

  Dataset EGAD00001006768

• SF6839

  RNA-exome

  Dataset EGAD00001006769

• SF11587

  RNA-exome

  Dataset EGAD00001006770

• SF9640

  RNA-exome

  Dataset EGAD00001006771

• SF6587

  RNA-exome

  Dataset EGAD00001006772

• SF11082

  RNA-exome

  Dataset EGAD00001006773

• SF9135

  RNA-exome

  Dataset EGAD00001006747

• SF10750

  RNA-exome

  Dataset EGAD00001006748

• SF8642

  RNA-exome

  Dataset EGAD00001006749

• SF10064

  RNA exome

  Dataset EGAD00001006744

• SE4831

  RNA-exome

  Dataset EGAD00001006830

• SE8570

  RNA-exome

  Dataset EGAD00001006831

• SE9037

  RNA-exome

  Dataset EGAD00001006832

• SE6136

  RNA-exome

  Dataset EGAD00001006833

• SE10497

  RNA-exome

  Dataset EGAD00001006834

• SE4987

  RNA-exome

  Dataset EGAD00001006835

• SE4567

  RNA-exome

  Dataset EGAD00001006836

• SE9581

  RNA-exome

  Dataset EGAD00001006837

• RNA sequencing data of pediatric T-cell acute lymphoblastic leukemia (set 3)

  The dataset includes RNA sequencing FASTQ files from diagnostic tumor samples of two T-ALL patients (ALLK-126, ALLT-503). Two diagnostic samples of ALLT-503 were sequenced: one extracted from the bone marrow (ALLT-503D-RNA) and one from the lymph node (ALLT-503lympD-RNA). Novogene's internal method was used in directional library preparation including rRNA removal. The diagnostic tumor samples were sequenced using Illumina Novaseq X Plus, and the target sequencing depth was 21 Gb per sample.

  Dataset EGAD50000002586

• scRNA transcriptome and TCR sequencing data modeling treatment responses in eight renal cell carcinoma patient

  Single cell RNA sequencing and coupled TCR sequencing data generated following immunological treatments in patient-derived ex vivo tumor models. Dataset consist of 46 sequencing samples originating from eight individual patient-derived ex vivo models. Single cell RNA and TCR sequencing data is generated using 10X Genomics platform with 5´ sequencing. The submission contains 46 Fastq files where each patient-derived ex vivo model and it's transcriptomic response to specified treatment is a unique sequencing run. TCR sequencing runs are submitted as one file per individual model, gathering all the treatment conditions.

  Dataset EGAD50000001934

• Prostate Cancer - RNA-Seq unmapped reads

  Prostate Cancer - RNA-Seq unmapped reads

  Dataset EGAD00001003756

• RNA-Seq datasets in human islets cultured in low glucose conditions

  7 RNA-Seq datasets in human pancreatic islets from 7 donors, where islets were using low (4mM) glucose conditions.

  Dataset EGAD00001005208

• Human tumour bulk RNA-seq

  We profiled 18 high-grade gliomas patient tumor samples by bulk RNA-seq. The raw fastqs are provided.

  Dataset EGAD00001006098

• RNA-SEQ for the Caldas Lab breast cancer PDTX collection

  RNA-SEQ for the Caldas Lab breast cancer PDTX collection. This includes both single and paired end runs

  Dataset EGAD00001006307

• Patient TSO500 RNA

  Original patient tumours from which PDX models were derived. TruSight Oncology RNA panel for 2 samples, sequenced over 4 lanes each, gave 8 pairs of fastq files

  Dataset EGAD00001009659

• Smart-seq2 single-cell RNA-seq of human liver non-parenchymal cells

  Smart-seq2 single-cell RNA-seq of human liver non-parenchymal cells from lean and obese individuals

  Dataset EGAD00001010301

• RNA-Seq of pancreatic neuroendocrine tumors mutated in MEN1/DAXX/ ATRX

  RNA-Seq of of 11 primary pancreatic neuroendocrine tumors mutated in MEN1/DAXX/ ATRX used to identify molecular subtypes

  Dataset EGAD00001015695

• RNA sequencing data of pediatric TCF3::PBX1 acute lymphoblastic leukemia (set 1)

  The dataset includes RNA sequencing FASTQ files from a diagnostic tumor sample of one TCF3::PBX1 ALL patient (ALLT-335). NEBNext Ultra Directional RNA Library Prep Kit (New England Biolabs) was used in library preparation, and Globin-Zero Gold rRNA Removal Kit (Illumina) was utilized for rRNA removal. The diagnostic tumor sample was sequenced using Illumina Novaseq 6000, and the target sequencing depth was 21 Gb.

  Dataset EGAD50000002577

• RNA sequencing data of pediatric BCR::ABL1 acute lymphoblastic leukemia (set 1)

  The dataset includes RNA sequencing FASTQ files from a diagnostic tumor sample of one BCR::ABL1 ALL patient (ALLT-343). NEBNext Ultra Directional RNA Library Prep Kit (New England Biolabs) was used in library preparation, and Globin-Zero Gold rRNA Removal Kit (Illumina) was utilized for rRNA removal. The diagnostic tumor sample was sequenced using Illumina Novaseq 6000, and the target sequencing depth was 21 Gb.

  Dataset EGAD50000002579

• RNA sequencing data of pediatric BCR::ABL1 acute lymphoblastic leukemia (set 2)

  The dataset includes RNA sequencing FASTQ files from a diagnostic tumor sample of one BCR::ABL1 ALL patient (ALLT-399). TruSeq Stranded Total RNA Library Prep (Illumina) kit was used in library preparation, and Novogene's internal method was utilized in rRNA removal. The diagnostic tumor sample was sequenced using Illumina Novaseq X Plus, and the target sequencing depth was 21 Gb.

  Dataset EGAD50000002580

• RNA sequencing data of pediatric KMT2A-rearranged acute lymphoblastic leukemia (set 2)

  The dataset includes RNA sequencing FASTQ files from a diagnostic tumor sample of one KMT2A-r ALL patient (ALLT-355). NEBNext Ultra Directional RNA Library Prep Kit (New England Biolabs) was used in library preparation, and Ribo-Zero Magnetic Kit (Illumina) was utilized in rRNA removal. The diagnostic tumor sample was sequenced using Illumina Novaseq 6000, and the target sequencing depth was 21 Gb.

  Dataset EGAD50000002583

• RNA sequencing data of pediatric ETV6::RUNX1 acute lymphoblastic leukemia (set 3)

  The dataset includes RNA sequencing FASTQ files from a diagnostic tumor sample of one ETV6::RUNX1 ALL patient (ALLT-397). TruSeq Stranded Total RNA Library Prep (Illumina) kit was used in library preparation, and Novogene's internal method was utilized in rRNA removal. The diagnostic tumor sample was sequenced using Illumina Novaseq X Plus, and the target sequencing depth was 21 Gb.

  Dataset EGAD50000002587

• RNA sequencing data of pediatric ETV6::RUNX1 acute lymphoblastic leukemia (set 1)

  The dataset includes RNA sequencing FASTQ files from a relapse sample of one ETV6::RUNX1 ALL patient (ALLT-341). NEBNext Ultra Directional RNA Library Prep Kit (New England Biolabs) was used in library preparation, and Globin-Zero Gold rRNA Removal Kit (Illumina) was utilized for rRNA removal. The relapse sample was sequenced using Illumina Novaseq 6000, and the target sequencing depth was 21 Gb.

  Dataset EGAD50000002588

• RNA sequencing data of pediatric hyperdiploid acute lymphoblastic leukemia (set 2)

  The dataset includes RNA sequencing FASTQ files from a diagnostic tumor sample of one hyperdiploid ALL patient (ALLT-356). NEBNext Ultra Directional RNA Library Prep Kit (New England Biolabs) was used in library preparation, and Ribo-Zero Magnetic Kit (Illumina) was utilized in rRNA removal. The diagnostic tumor sample was sequenced using Illumina Novaseq 6000, and the target sequencing depth was 21 Gb.

  Dataset EGAD50000002593

• RNA sequencing data of pediatric hyperdiploid acute lymphoblastic leukemia (set 4)

  The dataset includes RNA sequencing FASTQ files from diagnostic tumor samples of three hyperdiploid ALL patients (ALLT-382, ALLT-395, ALLK-111). TruSeq Stranded Total RNA Library Prep (Illumina) kit was used in library preparation, and Novogene's internal method was utilized in rRNA removal. The diagnostic tumor samples were sequenced using Illumina Novaseq 6000, and the target sequencing depth was 21 Gb per sample.

  Dataset EGAD50000002596

• RNA sequencing data of pediatric B-other acute lymphoblastic leukemia (set 2)

  The dataset includes RNA sequencing FASTQ files from diagnostic tumor samples of three B-other ALL patients (ALLT-357, ALLT-361, ALLK-108). NEBNext Ultra Directional RNA Library Prep Kit (New England Biolabs) was used in library preparation, and Ribo-Zero Magnetic Kit (Illumina) was utilized in rRNA removal. The diagnostic tumor samples were sequenced using Illumina Novaseq 6000, and the target sequencing depth was 21 Gb.

  Dataset EGAD50000002597