23217 results for "ega"

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• Dataset for breast_cancer-WHOLE_GENOME

  Rare cancer sequencing data of 12 runs in tumor/control pairs, which were uploaded to umbrella studies. The sequencing was always paired

  Dataset EGAD00001008867

• Phased melanoma whole genomes

  We have sequenced whole genomes of 10 melanoma samples (1 cell line; A375 and 9 patient derived short term cultures). Libraries were prepared with 10X linked reads technology in order to obtain phase information and subsequently sequenced on Illumina NovaSeq6000.

  Dataset EGAD00001005773

• Bulk RNAseq of paired IDHwt GBM

  64 paired-end Illumina RNAseq whole transcriptome stranded libraries from 32 pairs of matched primary and recurrent GBM

  Dataset EGAD00001009806

• The University of Hong Kong Gastric Cancer RHOA Study RNASeq Data

  RNAseq data generated from paired tumor frozen tissues in which the tumor organoids were established for cell-cell or cell-matrix adhesion dependency assay.

  Dataset EGAD00001008830

• Control iPSC lines with clinically annotated genetic variants for versatile multi-lineage differentiation Committee

  Four iPSC line data were sequenced by WGS. One of them has gene MYBPC3 modified.

  Dataset EGAD00001005066

• LBC1921 VCF

  LBC1921 and LBC1936 GVCFs called with GATK's HaplotypeCaller were combined and subject to variant quality score recalibration. This VCF contains the subset of samples (n = 296) from the LBC1921 cohort.

  Dataset EGAD00001005477

• 16S data from IBD patients

  Bacterial 16S V4 rDNA was amplified using two differently barcoded V4 fusion primers. Pooled PCR samples were purified and paired-end sequenced on MiSeq instrument for 250 cycles. The steps from DNA quantification to sequencing were conducted at Second Genome Inc.

  Dataset EGAD00001005482

• A98258B

  Whole genome sequencing for single cells for library A98258B 1357 cells; filetype=bam

  Dataset EGAD00001007127

• A98285A

  Whole genome sequencing for single cells for library A98285A 1422 cells; filetype=bam

  Dataset EGAD00001007131

• ctDNA mutation analysis using the SiMSen-seq approach

  Mutation analysis in plasma samples with low ctDNA levels using a molecular barcoding technology, i.e. the single target approach SiMSen-seq (Simple, multiplexed, PCR-based barcoding of DNA for sensitive mutation detection using sequencing).

  Dataset EGAD00001006104