22951 results for "ega"

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• bulk TCR seq

  bulk TCR-seq data IMCISION on the PBMCs of responding patients bulkTCR-seq data generated with the immunoSEQ platform (Adaptive Biotechnologies) on PBMCs of responding patients, pre- and post-treatment.

  Dataset EGAD00010002546

• uganda_X

  Genotype data (in binary PLINK format) and imputed data (with merged 1000Gp3 and AGVP reference panel in GEMMA BIMBAM dosage format) for 1391 individuals from EMaBS in Entebbe, Uganda - X chromosome.

  Dataset EGAD00010002583

• Batch2_Genotypes_Raw

  Genotypes generated for Puno cohort Batch 2. Case (PRE) and control (PUN) families were recruited in hospital. Raw genotypes no QC. Includes unrelated genotyping controls (HG).

  Dataset EGAD00010002124

• The Genomic Map of Poland in Open Access

  The main goal is to prepare and share WGS/WES of Polish population

  Study EGAS50000000092

• The Genomic Map of Polad in Open Access

  The main goal is to prepare and share WGS/WES of Polish population

  Study EGAS50000000095

• The Genomic Map of Polad in Open Access

  The main goal is to prepare and share WGS/WES of Polish population

  Study EGAS50000000093

• The Genomic Map of Polad in Open Access

  The main goal is to prepare and share WGS/WES of Polish population

  Study EGAS50000000118

• The Genomic Map of Polad in Open Access

  The main goal is to prepare and share WGS/WES of Polish population

  Study EGAS50000000117

• The Genomic Map of Polad in Open Access

  The main goal is to prepare and share WGS/WES of Polish population

  Study EGAS50000000116

• The Genomic Map of Polad in Open Access

  The main goal is to prepare and share WGS/WES of Polish population

  Study EGAS50000000115

• Clinical data IMvigor130 cohort

  Clinical data for IMvigor130 cohort of patients, including treatment, response, survial time, and tumor PDL1-IC staining score.

  Dataset EGAD50000000143

• CD8 T cell PBMC metadata

  Cell annotation for single CD8 T cells of PBMC collected from 113 patients, including UMAP coordinates and annotation

  Dataset EGAD50000000144

• The Genomic Map of Polad in Open Access

  The main goal is to prepare and share WGS/WES of Polish population

  Study EGAS50000000121

• The Genomic Map of Polad in Open Access

  The main goal is to prepare and share WGS/WES of Polish population

  Study EGAS50000000120

• The Genomic Map of Polad in Open Access

  The main goal is to prepare and share WGS/WES of Polish population

  Study EGAS50000000119

• The Genomic Map of Polad in Open Access

  The main goal is to prepare and share WGS/WES of Polish population

  Study EGAS50000000113

• The Genomic Map of Polad in Open Access

  The main goal is to prepare and share WGS/WES of Polish population

  Study EGAS50000000112

• The Genomic Map of Polad in Open Access

  The main goal is to prepare and share WGS/WES of Polish population

  Study EGAS50000000111

• The Genomic Map of Polad in Open Access

  The main goal is to prepare and share WGS/WES of Polish population

  Study EGAS50000000110

• Duplex Sequencing of normal and tumor tissues from case 2 and case 3 (10 DS)

  Duplex Sequencing of normal and tumor tissues from case 2 and case 3 (10 DS)

  Dataset EGAD50000000239

• Single Cell RNA-Seq

  Examination of Sample Multiplexing Reagents for Single Cell RNA-Seq. Nine techniques applied to samples from four PDX models: #105, #177, #233, #264

  Dataset EGAD50000000216

• Induced pluripotent stem cell derived pericytes respond to mediators of proliferation and contractility

  Differentiation of mesoderm pericytes from induced pluripotent stem cell lines.

  Study EGAS50000000176

• Short-read transcriptomic data

  Short-read transcriptomic data of unaffected control, expansion negative, and expansion positive FECD CECs

  Dataset EGAD50000000436

• B-lineage cells in coeliac disease Data Access Committee

  The DAC will be made up of: Ida Lindeman ida.lindeman@medisin.uio.no (admin) Ludvig M. Sollid l.m.sollid@medisin.uio.no Rasmus Iversen rasmus.iversen@medisin.uio.no

  Dac EGAC50000000162

• PREGO

  Core set of the PREGO biobank containing experimental genotypes at 209,706 autosomal sites measured on Affymetrix PMRA Axiom array plates for a group of 3,234 individuals from Western France.

  Dataset EGAD00010002661

• single cell transcriptomic analysis of tumor samples collected from 5 patients with EMM

  Contains the raw single cell RNAseq data used for the study

  Study EGAS50000000034

• MM GWAS dataset

  This is a meta-analysis of myeloma datasets, both with and without the UK Biobank cohort included.

  Dataset EGAD50000000422

• Breast Invasive Lobular Carcinoma CDH1 WGS dataset

  We subjected to whole genome sequencing (WGS) one ILC case lacking CDH1 biallelic mutations. Both tumor and normal samples were sequenced.

  Dataset EGAD50000000696

• Targeted nanopore sequencing of FGF14 repeat expansions

  This dataset includes FASTQ files from FGF14 alleles sequenced by targeted nanopore in 67 patients, 64 control individuals and three unaffected relatives.

  Dataset EGAD50000000692

• EAC-protein

  This dataset contains single cell protein tag sequencing of EAC samples by 10x Genomics CITE-seq. Total number of files - 24. File format - FASTQ.

  Dataset EGAD50000000751

• Comparison of good PDX responders and bad PDX responders

  RNA-Seq raw data of untreated breast cancer xenografts known as good or bad acetalax responders.

  Dataset EGAD50000000876

• Exomes MDS 5q

  Paired fastq files of exome sequencing that belong to 5q myelodysplastic syndrome patients are shared in this submission. Illumina technology was used to obtain such data.

  Dataset EGAD50000000923

• cfDNA dataset with expanded panel for cfDNA cohort

  Cell free DNA sequencing data for 9 samples with expanded panel across multiple cancer types for cfDNA cohort

  Dataset EGAD50000000667

• COVID-19 progression and convalescence in common variable immunodeficiency patients

  Longitudinal analysis of single-cell RNAseq datasets of PBMCs from COVID-19 CVID patients and controls.

  Dataset EGAD50000000543

• Colorectal cancer functional annotation - ChIP

  ChIP-seq data for multiple colorectal cancer cell lines (H3K4me1, H3K4me3, H3K27ac, H3K27me3, H3K36me3, CTCF)

  Study EGAS50000000207

• Single-cell whole genome sequencing data of Pediatric B-cell Acute Lymphoblastic Leukemia

  Single-cell whole genome sequencing data of Pediatric B-cell Acute Lymphoblastic Leukemia

  Dataset EGAD50000000976

• RNA-seq data from 9 patients with peri-implantitis

  Fastq files + patients' characteristics

  Dataset EGAD50000000544

• sWGS for 92 samples of mCRC

  Shallow Whole Genome Sequencing of 92 mCRC samples. Chromosomal copy number alterations analysis was performed with the samples to predict response to bevacizumab.

  Dataset EGAD50000000992

• Whole Genome Sequencing of tissues

  Whole genome sequencing profiling of 4 primary PDAC tissue samples - WGS unmapped reads, sequenced using NovaSeq 6000, 15x coverage 160 million reads per sample.

  Dataset EGAD50000000279

• TCR β-chain repertoire sequences of regulatory and conventional T cells in peripheral blood from breast cancer patients and healthy individuals

  Dataset EGAD00001004385

• nEODURVARIB clinical trial. Exome sequencing in advanced urothelial carcinoma

  Exome sequencing (BAM and VCF files) in advanced urothelial carcinoma in diagnostic and pos-ttreatment samples

  Dataset EGAD50000001162

• WES of HNSCC PDX models

  Whole exome sequencing of cetuximab-sensitive and -resistant patient-derived xenograft models from two HNSCC patients.

  Dataset EGAD50000001176

• Early ctDNA molecular response captures therapeutic response in the first stage of CCTG BR.36 ctDNA-directed, multi-center phase II study of molecular response adaptive immunotherapy in non-small cell lung cancer

  Study EGAS00001007298

• Roifman DAC

  This Data Access Committee will oversee all requests for data submitted by Dr. Chaim Roifman at the Hospital for Sick Children in Toronto, Canada. Requests should be directed by email to chaim.roifman@sickkids.ca.

  Dac EGAC50000000396

• RNA-seq of murine osteosarcoma cell line genetically modified for CYR61

  Transcriptomic analysis of K7M2 murine osteosarcoma cells stably modified to overexpress or repress CYR61

  Dataset EGAD50000000747

• Phenotype-modifier genes in FHHNC

  Whole exome sequencing data in FHHNC patients stratified in extreme phenotypes to identify potential phenotype modifier variants

  Dataset EGAD50000001217

• Picuris Pueblo Genomic Project – Modern Dataset

  Please refer to the Supplemental Materials of the paper for more information.

  Dataset EGAD50000001245

• WES PTCL Data

  Whole Exome Sequencing (WES) of 153 FFPE DNA samples of Peripheral T-Cell Lymphoma. Associated with "Molecular biomarkers for stratification periheral T cell lymphoma" study.

  Dataset EGAD50000001250

• WGS of kidney cancer organoid biobank

  Dataset EGAD00001005319

• RNA-Seq of SMARCB1 re-expression and HDAC+mTOR inhibition experiments in malignant rhabdoid tumor organoids

  Dataset EGAD00001006574