22959 results for "ega"

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• Dataset for whole exome sequencing of PTCLs

  The dataset consists of whole exome sequencing FASTQ files and analyzed data, including single nucleotide variants (SNVs) and short insertions and deletions (Indels) of candidate driver genes.

  Dataset EGAD50000001798

• WGS Study From Pediatrics

  This is a set of 20 10X Genomics Chromium WGS

  Dataset EGAD00001008011

• Whole Exome Sequencing of gliomas

  15 whole exome sequencing datasets from five patients. Data is provided as bam files. Libraries were generated using the SeqCap EZ Exome v3.0 kit and sequenced on an Illumina sequencer

  Dataset EGAD00001003763

• Gastric Cancer Organoid Cultures and Tumors RNASeq Data

  RNASeq data generated from organoid cultures established from gastric cancers and normal mucosae, paired tumor frozen tissues, and cultured fibroblast.

  Dataset EGAD00001004302

• WGS and RNA-Seq data from a GBM patient PT-FB6711

  WGS and RNA-Seq data from a GBM patient PT-FB6711

  Dataset EGAD00001004235

• Low

  Non-deduplicated bam files comprising Illumina HiSeq2500 SE100 low coverage whole genome data for 30 pre-treatment (BL) cfDNA samples and 20 matched post-treatment (PD) cfDNA samples.

  Dataset EGAD00001005070

• 10x Single Cell Gene Expression Library SCRNA10X_CS_CHIP0183_002A

  10x Single Cell Gene Expression library SCRNA10X_CS_CHIP0183_002A for Diffuse large B-cell lymphoma patient sample TFRI_Pair_9_DLBCL

  Dataset EGAD00001010232

• 666PG SNVs

  SNV calls generated using SomaticSniper in VCF format from the CPCGene 666PG study

  Dataset EGAD00001006148

• Melanoma C32 ENU resistance to Combination Therapy

  This study involves mutagenizing C32, a melanoma cell line, with ENU to identify those mutations which engender resistance to a targeted treatment.

  Dataset EGAD00001002234

• Illumina_WXS_MET-CELL-XEN

  Whole-exome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from PDO culture derived from colorectal cancer metastasis sample

  Dataset EGAD00001002097

• Whole genome sequencing in myasthenia gravis

  This dataset contains whole genome sequencing data on 25 individuals with myasthenia gravis. The data was generated using Illumina sequencing technology and is presented as BAM files for each sample.

  Dataset EGAD00001005262

• WGS seq data (56 tumor/control pairs) for study EGAS00001001394

  Part of WGS seq data of Maligant Lymphoma study (ICGC)

  Dataset EGAD00001001673

• A96233A

  Whole genome sequencing for single cells for library A96233A 637 cells; filetype=bam

  Dataset EGAD00001007622

• Genome-wide data and mtDNA Resande and Swedes

  This dataset includes genome-wide autosomal array data and whole mtDNA sequences for 12 Resande and 17 Swedish individuals.

  Dataset EGAD00001008697

• The genotype of LAM disease

  Tumor biopsies from LAM disease were retrospectively analyzed by multiple techniques to characterize the alterations in patients ,to elucidate the landscape of genetic/genomic alterations.

  Dataset EGAD00001005363

• 666PG indels

  Indel calls generated using Pindel in VCF format from the CPCGene 666PG study

  Dataset EGAD00001006147

• Macrophage response in term and preterm infants

  The data set comprises 48 samples from term and preterm infants. Expression profiles were generated using different stimuli (O2 3%, 21%, 65%; LPS stimulation).

  Dataset EGAD00001006885

• A98293B

  Whole genome sequencing for single cells for library A98293B 703 samples; filetype=bam

  Dataset EGAD00001008265

• Whole Exome Sequencing of Localized Prostate Cancer Patients

  Whole exome sequencing of localized prostate cancer patients in this study contained pair tumor-normal samples and validated tumor content.

  Dataset EGAD00001008274

• GEL WGS Comparison

  These samples are to be analysed with the CGP Developed cancer panel and the results will be compared with WGS data from 4 different comercial providers.

  Dataset EGAD00001000872

• Sequencing data for Murtaza et al. Nature Communications 2015 (doi:10.1038/ncomms9760)

  Exome and targeted amplicon sequencing data for tumor, germline and plasma samples from a patient with metastatic breast cancer.

  Dataset EGAD00001002108

• Saliva microbiota in Finnish children

  The saliva microbiota of 972 Finnish children, aged 9-14 years was characterized using the 16S rRNA (V3-V4) gene sequencing with Illumina Hiseq platform.

  Dataset EGAD00001004145

• Single cell transcriptome atlas of immune cells in human small intestine and in Celiac disease

  Single cell transcriptome atlas of immune cells in human small intestine and in Celiac disease

  Dataset EGAD00001005127

• MT sequencing reads from WGS of 10 Egyptian individuals

  This data set contains for 10 Egyptian individuals the WGS reads mapping to chrM. These were subsequently used for haplogroup assignment.

  Dataset EGAD00001006038

• NICHE - RNA-seq of MMR proficient and MMR deficient early stage colon cancers

  The dataset includes 77 FASTQ files from single-end total RNA sequencing on Illumina HiSeq2500 for 39 patients.

  Dataset EGAD00001006042

• Alveolar Rhabdomyosarcoma sequencing data

  This dataset comprises DNA sequencing for tumor and matched normal from an Alveolar Rhabdomyosarcoma patient. It also include RNA sequencing data from the tumor sample.

  Dataset EGAD00001006622

• Single cell targeted RNA sequencing

  Single cell hybrid-capture targeted sequencing of CD19 CAR T-cell infusion products used for standard of care treatment for relapsed/refractory large B-cell lymphoma.

  Dataset EGAD00001006327

• RNA sequencing of AD, MCI and control OM cells

  Total RNA sequencing of cultured OM cells derived from patients with Alzheimer's disease (AD), individuals with mild cognitive impairment (MCI) and cognitively healthy controls.

  Dataset EGAD00001008707

• Mixtures of 5-9 individuals

  Deconvoluted files of the 5-9 individuals of in silico datasets (combination of biological mixture sequencing and publicly available data). The dataset includes the phenotypes used for clustering.

  Dataset EGAD00001008725

• Illumina_WGS_T-XEN-CELL

  Whole-genome sequencing on Illumina HiSeq2000/2500 of PDO culture derived from Patient-derived xenograft derived from colorectal cancer primary tumor sample

  Dataset EGAD00001002092

• RNAseq analysis on metastatic Colorectal Cancer xenografts samples

  Bank of metastatic colorectal cancer (mCRC) of Patient Derived Xenografts (PDXs)

  Dataset EGAD00001009171

• Bulk exome sequencing of primary GBM - SF 10282

  We performed bulk exome-seq on a primary GBM and a blood sample from SF10282

  Dataset EGAD00001002275

• IVF MeDIP-seq bam files

  Bam files consisting of aligned MeDIP-seq reads from cord blood cells and cord blood mononuclear cells of twins conceived through in vitro fertilisation

  Dataset EGAD00001003158

• Single-cell TCR sequencing of gammadelta IELs in celiac disease

  Paired single-cell sequencing dataset of T-cell receptors from IELs, from both treated and untreated celiac patients and from controls. (Amplicon sequencing, paired-end fastq files).

  Dataset EGAD00001005362