23272 results for "ega"

in 34.82 milliseconds.

• ONT Minion reads for a patient with ataxia-pancytopenia syndrome.

  ONT Minion reads to provide 30x coverage for a patient with ataxia-pancytopenia syndrome.

  Dataset EGAD00001005022

• WGBS data set used in the study, 96 samples

  WGBS data set used in the study, 96 samples

  Dataset EGAD00001007968

• NSCLC Whole Genome Sequencing data

  There are 64 NSCLC samples, including pre-treatment, post-treatment, and normal samples, sequenced by whole genome sequencing technology and archived in bam files.

  Dataset EGAD00001007977

• 4C-Seq datasets of EndoC-bh1

  2 Circular chromosome conformation capture (4C-Seq) datasets of the human beta cell line EndoC-bh1.

  Dataset EGAD00001005210

• PitNET normal-tumor exome sequencing samples

  PitNET white blood cell DNA - tumor DNA exome sequencing samples with Illumina exome sequencing. Fifteen patients and total of 30 exomes.

  Dataset EGAD00001006390

• Transcriptomic profiling of patient-derived xenografts and organoids in prostate cancer

  Dataset contains RNA-seq of 30 samples (normal prostate tissue, human prostate cancer, PDX and organoids).

  Dataset EGAD00001006404

• Sputum metagenome for COPD patients and healthy controls

  This dataset contains the sputum metagenome from 99 COPD patients and 36 healthy individuals in China.

  Dataset EGAD00001009063

• FMI data

  This dataset contains somatic alteration calls summarized at the gene level for 715 patients profiled by FoundationOne (Foundation Medicine).

  Dataset EGAD00001006616

• DLP+ Single Cell Genomic Library A98167

  DLP+ Single Cell Genomic Library A98167 for Diffuse large B-cell lymphoma patient sample TFRIPAIR4_DLBCL

  Dataset EGAD00001010249

• RNA-seq data from sorted CML and normal samples

  RNA-seq data from sorted populations from 10 CML samples and 4 normal bone marrow samples.

  Dataset EGAD00001004079

• FAST5 original nanopore data from MinION sequencing of 10 tumor samples

  FAST5 original nanopore data from MinION sequencing of 10 tumor samples

  Dataset EGAD00001009689

• Chad genetic diversity reveals an African history marked by multiple Holocene Eurasian migrations

  Whole-genome sequencing data from Chad and Lebanon.

  Dataset EGAD00001002742

• WGS files for Roussel-ATRT-TM

  WGS files for Roussel-ATRT-TM paper titled "Atypical teratoid/ rhabdoid tumoroids reveal subgroup-specific drug vulnerabilities"

  Dataset EGAD00001009163

• AA HCC patients from Chang Gung Memorial Hospital

  This dataset contains 21 tumor-normal pairs of exome sequencing data of HCC patient from Chang Gung Memorial Hospital, Taiwan.

  Dataset EGAD00001003466

• Reference epigenome Kidney-Podocyte01 input ChIP-Seq data generated from KEP study

  Kidney-Podocyte01 input ChIP-Seq paired end data

  Dataset EGAD00001007234

• Reference epigenome Kidney-Podocyte01 h3k4me3 ChIP-Seq data generated from KEP study

  Kidney-Podocyte01 h3k4me3 ChIP-Seq paired end data

  Dataset EGAD00001007232

• Reference epigenome ADMSC01_smRNA-Seq data generated from KEP study

  A ADMSC01_smRNA-Seq single end data for adipose-derived mesenchymal stroaml cells

  Dataset EGAD00001003867

• 7 samples RNA-seq raw data

  Dataset comprising raw paired RNA-seq data in fastq.gz format for 7 samples of rosette forming brain tumors

  Dataset EGAD00001009265

• Epiclomal: probabilistic clustering of sparse single-cell DNA methylation data for library px0544_SA532X6

  68 samples; filetype=bam

  Dataset EGAD00001004817

• Reference epigenome Fat-adipocyte03 input ChIP-Seq data generated from KEP study

  Fat-adipocyte03 input ChIP-Seq paired end data

  Dataset EGAD00001007477

• Widespread hypertranscription in aggressive human cancers

  Data used to validate RNAmp tool.

  Dataset EGAD00001009285

• Covid vaccination BCR repertoire analysis

  This dataset contains multiplexed fastq files containing raw BCR repertoire data

  Dataset EGAD00001007777

• Integrated Genomic, Epigenetic, and Expression Analyses of Ovarian Cancer Cell Lines

  In this dataset there are 55 whole genome sequencing samples of epithelial ovarian carcinoma (bam files).

  Dataset EGAD00001004532

• Whole-exome sequencing of adult T-cell leukemia/lymphoma

  Whole-exome sequencing of 81 tumor/normal pairs of adult T-cell leukemia/lymphoma

  Dataset EGAD00001001410

• Whole exome sequencing of inflammatory bowel disease cases

  Whole exome sequencing of around 700 inflammatory bowel disease cases.This data can only be used for the identification of IBD/immune-mediated disease loci.

  Dataset EGAD00001001354

• TRACERx100 RNAseq

  TRACERx 100: RNAseq data from the first 100 TRACERx tumours (164 tumor regions from 64 patients)

  Dataset EGAD00001004591

• Whole genome sequencing and genotyping of samples from CMBAN (Bantu from Cameroon)

  Whole genome sequencing and genotyping of samples from CMBAN (Bantu from Cameroon)

  Dataset EGAD00001005012

• Reference epigenome KNIH001 WGBS data generated from KEP study

  A KNIH001 Whole-Genome Bisulfite Sequencing(WGBS) paired end data for islet cells

  Dataset EGAD00001002749

• WGS from 68 MM patients

  Mutations calls from 68 MM patients collected with Mutect2. All tumor samples were CD138+ cells at diagnosis and all control samples were PBMCs.

  Dataset EGAD00001009692

• Illumina_RNA_T-CELL

  RNAseq on Illumina HiSeq2000/2500 of PDO culture derived from colorectal cancer primary tumor sample

  Dataset EGAD00001002078

• RNA sequencing data of Atypical teratoid/rhabdoid tumors (ATRT)

  RNA sequencing data of Atypical teratoid/rhabdoid tumors (ATRT)

  Dataset EGAD00001002136

• Amplicon sequencing

  Fastq files from amplicon sequencing in 106 Multiple Sclerosis patients and 105 healthy volunteers in CD4 T cells, CD8 T cells and genomic DNA using PE300 Illumina MiSeq.

  Dataset EGAD00001005774

• CYP2C19 long-read sequencing

  We have assessed the added value of long-read sequencing for PGx focusing on the clinically important and highly polymorphic CYP2C19 gene within 48 samples.

  Dataset EGAD00001009883

• Reference epigenome Pancreas-Islet02 h3k27ac ChIP-Seq data generated from KEP study

  Pancreas-Islet02 h3k27ac ChIP-Seq paired end data

  Dataset EGAD00001007193

• Reference epigenome Pancreas-Islet03 h3k9me3 ChIP-Seq data generated from KEP study

  Pancreas-Islet03 h3k9me3 ChIP-Seq paired end data

  Dataset EGAD00001007205

• Reference epigenome Pancreas-Islet04 h3k27ac ChIP-Seq data generated from KEP study

  Pancreas-Islet04 h3k27ac ChIP-Seq paired end data

  Dataset EGAD00001007207

• Reference epigenome Pancreas-beta01 h3k27me3 ChIP-Seq data generated from KEP study

  Pancreas-beta01 h3k27me3 ChIP-Seq paired end data

  Dataset EGAD00001007215

• Reference epigenome Pancreas-Islet04 h3k27me3 ChIP-Seq data generated from KEP study

  Pancreas-Islet04 h3k27me3 ChIP-Seq paired end data

  Dataset EGAD00001007208

• Reference epigenome Pancreas-Islet04 h3k36me3 ChIP-Seq data generated from KEP study

  Pancreas-Islet04 h3k36me3 ChIP-Seq paired end data

  Dataset EGAD00001007209

• Reference epigenome Pancreas-Islet04 input ChIP-Seq data generated from KEP study

  Pancreas-Islet04 input ChIP-Seq paired end data

  Dataset EGAD00001007213

• Reference epigenome Pancreas-beta01 h3k9me3 ChIP-Seq data generated from KEP study

  Pancreas-beta01 h3k9me3 ChIP-Seq paired end data

  Dataset EGAD00001007219

• Reference epigenome Fat-Preadipocyte01 h3k27me3 ChIP-Seq data generated from KEP study

  Fat-Preadipocyte01 h3k27me3 ChIP-Seq paired end data

  Dataset EGAD00001007222

• Reference epigenome Kidney-Podocyte03 h3k9me3 ChIP-Seq data generated from KEP study

  Kidney-Podocyte03 h3k9me3 ChIP-Seq paired end data

  Dataset EGAD00001007240

• Reference epigenome Kidney-Podocyte03 h3k27me3 ChIP-Seq data generated from KEP study

  Kidney-Podocyte03 h3k27me3 ChIP-Seq paired end data

  Dataset EGAD00001007236

• Reference epigenome Kidney-Podocyte03 h3k4me1 ChIP-Seq data generated from KEP study

  Kidney-Podocyte03 h3k4me1 ChIP-Seq paired end data

  Dataset EGAD00001007238

• Reference epigenome Kidney-Podocyte03 h3k4me3 ChIP-Seq data generated from KEP study

  Kidney-Podocyte03 h3k4me3 ChIP-Seq paired end data

  Dataset EGAD00001007239

• Reference epigenome Kidney-mesangial01 h3k9me3 ChIP-Seq data generated from KEP study

  Kidney-mesangial01 h3k9me3 ChIP-Seq paired end data

  Dataset EGAD00001007254

• Reference epigenome IPS-Fibroblast02 h3k4me3 ChIP-Seq data generated from KEP study

  IPS-Fibroblast02 h3k4me3 ChIP-Seq paired end data

  Dataset EGAD00001007274

• Reference epigenome IPS-NPC01 h3k27me3 ChIP-Seq data generated from KEP study

  IPS-NPC01 h3k27me3 ChIP-Seq paired end data

  Dataset EGAD00001007278

• Reference epigenome IPS-NPC01 h3k36me3 ChIP-Seq data generated from KEP study

  IPS-NPC01 h3k36me3 ChIP-Seq paired end data

  Dataset EGAD00001007279

• Reference epigenome Pancreas-Islet07 h3k27me3 ChIP-Seq data generated from KEP study

  Pancreas-Islet07 h3k27me3 ChIP-Seq paired end data

  Dataset EGAD00001007458

• Reference epigenome Pancreas-Islet07 h3k36me3 ChIP-Seq data generated from KEP study

  Pancreas-Islet07 h3k36me3 ChIP-Seq paired end data

  Dataset EGAD00001007459

• Reference epigenome Pancreas-Islet08 h3k27me3 ChIP-Seq data generated from KEP study

  Pancreas-Islet08 h3k27me3 ChIP-Seq paired end data

  Dataset EGAD00001007465

• Reference epigenome Pancreas-Islet08 input ChIP-Seq data generated from KEP study

  Pancreas-Islet08 input ChIP-Seq paired end data

  Dataset EGAD00001007470

• Reference epigenome Fat-adipocyte03 h3k36me3 ChIP-Seq data generated from KEP study

  Fat-adipocyte03 h3k36me3 ChIP-Seq paired end data

  Dataset EGAD00001007473

• OT2_Illumina_WGS_T_XEN

  Whole-genome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer primary tumor sample (OT2_cohort)

  Dataset EGAD00001003376

• HipSci - Healthy Normals - Exome Sequencing - July 2017

  HipSci - Healthy Normals - Exome Sequencing - July 2017

  Dataset EGAD00001003514

• BLUEPRINT Bisulfite-seq and Whole Genome Sequencing of mantle cell lymphoma

  BLUEPRINT Bisulfite-seq and Whole Genome Sequencing of mantle cell lymphoma

  Dataset EGAD00001001892

• DLP+ Single Cell Genomic Library A98203

  DLP+ Single Cell Genomic Library A98203 for Diffuse large B-cell lymphoma patient sample TFRIPAIR8_DLBCL

  Dataset EGAD00001010242

• Nascent transcriptome in T-ALL

  Nascent transcriptome (GRO-seq) data representing bone marrow mononuclear cells of two diagnostic T-ALL samples.

  Dataset EGAD00001008410

• Genomic heterogeneity recapitulated in a PDXovo model - WXS unaligned reads

  Ultra-Fast Patient-Derived Xenografts Identify Functional and Spatial Tumour Heterogeneities that Drive Therapeutic Resistance - WXS unaligned reads

  Dataset EGAD00001003590

• WES files for CHEN WTPDX WES

  WES files for CHEN WTPDX paper titled "Forty-Five patient-derived xenografts capture the clinical and biological heterogeneity of Wilms tumor"

  Dataset EGAD00001004506

• Paired-end ATAC-seq analysis of the 3D spatially mapped GBM samples.

  Dataset contains 70 paired-end ATAC-seq samples from 8 patients.

  Dataset EGAD00001010311

• Engineered Human Primary T Cell transcriptome study

  Engineered Human Primary T Cell transcriptome study

  Dataset EGAD00001008722

• Whole transcriptome and whole exome sequencing of BPDCN patients

  Here, seven patients with BPDCN were characterized using RNA-seq and WXS.

  Dataset EGAD00001010314

• Dataset for Manuscript: Cancer genome standards for long-read sequencing using cancer cell line mixtures

  Dataset for Manuscript: Cancer genome standards for long-read sequencing using cancer cell line mixtures

  Dataset EGAD00001015628

• Targeted sequencing of head and neck squamous cell carcinomas

  This dataset includes 112 head and neck tumour samples with matched normal (blood) samples sequenced using a custom hybrid capture panel.

  Dataset EGAD00001004269

• DNMT3A microcephalic primordial dwarfism RRBS data

  RRBS sequence data from one control and one patient with de novo DNMT3A mutations resulting in microcephalic primordial dwarfism.

  Dataset EGAD00001004472

• RNA-seq of UTUC samples

  This dataset includes transcription profiling by RNA-seq of 3 upper urinary tract urothelial tumours (UTUC).

  Dataset EGAD00001008138

• DLP+ Single Cell Genomic Library A98180

  DLP+ Single Cell Genomic Library A98180 for Diffuse large B-cell lymphoma patient sample TFRI_Pair_13_DLBCL

  Dataset EGAD00001010240

• An aggregated vcf file

  Germline variants calls were defined using the sequenced reads derived from 230 patients with hepatocellular carcinoma. This dataset is comprised of one aggregated vcf file.

  Dataset EGAD00001009410

• DLP+ Single Cell Genomic Library A98225

  DLP+ Single Cell Genomic Library A98225 for Diffuse large B-cell lymphoma patient sample TFRIPAIR12_DLBCL_rel

  Dataset EGAD00001010246

• Dataset for "Intratumoral Heterogeneity and Clonal Evolution Induced by HPV Integration" (Illumina)

  Dataset for "Intratumoral Heterogeneity and Clonal Evolution Induced by HPV Integration" (Illumina)

  Dataset EGAD00001009630

• KCL PRECSION lpWGS

  KCL lpWGS samples for copy number analysis

  Dataset EGAD00001008380

• 23 Brugada syndrome Exomes

  Exome sequencing data of 24 Brugada syndrome individuals

  Dataset EGAD00001008398

• Subfraction targeted high-througput sequencing

  This dataset include the Fastq files from Capture-based targeted high throughput sequencing of bulk, monocytic and progenitor subfractions of PHENOMUT11 sample.

  Dataset EGAD00001009628

• McGill EMC Release 4 in tissue "venous blood" for cell type "Monocyte"

  McGill EMC Release 4 in tissue "venous blood" for cell type "Monocyte"

  Dataset EGAD00001001282

• RNASeq files for CIC paper data

  RNASeq files for CIC paper titled "Malignant progression of an ancestral bone marrow clone harboring a CIC-NUTM2A fusion in isolated myeloid sarcoma"

  Dataset EGAD00001009788

• MPN TGS2_Follow up _ PT1_Vori_other

  Targetted capture and resequencing of 94 known myeloid genes across MPN trials (PT1 and Voriconazole study) and other MPN samples.

  Dataset EGAD00001001236

• DLBCL Validation (FFPE) Cohort

  miRNA-seq Cohort of 140 Formalin Fixed Paraffin Embedded Diffuse Large B-cell Lymphoma Patient Samples

  Dataset EGAD00001001073

• Illumina_WGS_MET

  Whole-genome sequencing on Illumina HiSeq2000/2500 of colorectal cancer metastasis sample

  Dataset EGAD00001002084

• BC WGS Dataset 1

  Frequent somatic transfer of mitochondrial DNA into the nuclear genome of human cancer cells

  Dataset EGAD00001001350

• OT2_Illumina_WGS_MET_CELL

  Whole-genome sequencing on Illumina HiSeq2000/2500 of PDO culture derived from colorectal cancer metastasis sample (OT2_cohort)

  Dataset EGAD00001003373

• OT2_Illumina_WXS_T_XEN

  Whole-exome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer primary tumor sample (OT2_cohort)

  Dataset EGAD00001003384

• Illumina_WGS_T-CELL

  Whole-genome sequencing on Illumina HiSeq2000/2500 of PDO culture derived from colorectal cancer primary tumor sample

  Dataset EGAD00001002089

• Thymic epithelial transplantation for complete DiGeorge syndrome Spatial (2025-07-28)

  Spatial transcriptomics study of thymic transplant biopsies . This dataset contains all the data available for this study on 2025-07-28.

  Dataset EGAD00001015659

• WGS files for paper titled "Patient-derived pediatric brain tumor organoids faithfully recapitulate primary tumors"

  WGS files for paper titled "Patient-derived pediatric brain tumor organoids faithfully recapitulate primary tumors"

  Dataset EGAD00001015800

• WXS files for paper titled "Patient-derived pediatric brain tumor organoids faithfully recapitulate primary tumors"

  WXS files for paper titled "Patient-derived pediatric brain tumor organoids faithfully recapitulate primary tumors"

  Dataset EGAD00001015801

• RNASeq files for paper titled "Patient-derived pediatric brain tumor organoids faithfully recapitulate primary tumors"

  RNASeq files for paper titled "Patient-derived pediatric brain tumor organoids faithfully recapitulate primary tumors"

  Dataset EGAD00001015802

• Remaining WGS files for Klco RPAML data

  Remaining WGS files for study titled "Genomics of pediatric myeloid neoplasms"

  Dataset EGAD00001008446

• H3Africa EPIGEN Phenotype

  Phenotype data from pregnant mothers unexposed and exposed to the Rwandan genocide from 59 whole blood samples.

  Dataset EGAD00001009739

• Dataset of CageKid tumor-normal paired RNA samples

  Dataset of CageKid tumor-normal paired RNA samples

  Dataset EGAD00001000720

• TP53 in ovarian cancer panel aligned reads Data Access Committee

  TP53 targeted panel aligned reads consisting of BAM paired end reads from ovarian cancer tumor samples Data Access Committee

  Dataset EGAD00001003119

• Ethiopia_Genome_Project_and_Egyptian_low_coverage_vcf

  Integrated callset of low coverage Ethiopian and Egyptian genomes from the Pagani et al. 2015 AJHG paper (doi: http://dx.doi.org/10.1016/j.ajhg.2015.04.019)

  Dataset EGAD00001003296

• EPO2_Illumina_RNA_XEN

  RNAseq on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from colorectal cancer primary tumor sample (EPO2_cohort)

  Dataset EGAD00001003362

• Exome sequencing of relapsed/refractory DLBCL

  This dataset consists of the exome sequencing data for 30 tumour and germline DNA pairs derived from relapsed/refractory DLBCL.

  Dataset EGAD00001003395

• RNAseq data from Turner syndrome and controls

  RNAseq data from the study: "Widespread DNA hypomethylation and differential gene expression in Turner syndrome".

  Dataset EGAD00001003428

• Genomic characterization of pancreatic tumours and matched xenograft and organoid models - WGS mapped reads

  Whole Genomes Define Concordance in Matched Primary, Xenograft, and Organoid Models of Pancreas Cancer - WGS mapped reads

  Dataset EGAD00001003586

• Whole genome sequence of hepatocellular carcinoma (BCM)

  Exome fastq files of 98 hepatocellular carcinoma and matched nomral (BCM, HCC-JP)

  Dataset EGAD00001003804

• Whole-exome sequencing data of Hepato-Cholangiocarcinoma

  Hepatocellular carcinoma specimens, intrahepatic cholangiocarcinoma specimens and liver normal tissues collected from 7 samples, including 44 fastq files from whole exome sequencing.

  Dataset EGAD00001003892