16802 results for "sec+and+unspecified+malignant+neoplasm"

in 34.69 milliseconds.

• Somatic variant calls from whole-exome sequencing of three tumor–normal matched cell lines

  This dataset comprises matched tumor–normal cell line samples. Whole-exome sequencing data are available for three matched pairs, and targeted deep sequencing–based somatic variant calls are provided for them as well in the form of VCF files.

  Dataset EGAD50000002392

• DCIS_FF_RNAseq

  This RNAseq dataset contains full transcriptome data on n=77 pure DCIS samples. The RNA is derived from fresh-frozen DCIS samples, obtained from two hospital based cohorts (NKI cohort and Oslo cohort). The libraries were sequenced with 54 bp paired end reads using a Novaseq instrument (Illumina). We share fastq data files of paired end sequencing (two files per sample).

  Dataset EGAD50000002123

• Baseline epigenetic clock measures in the Northern Ireland Cohort for the Longitudinal Study of Ageing (NICOLA)

  Epigenetic clock measures for a subset of 1,870 participants within the NICOLA cohort. The following epigenetic clocks were generated: (±PC)PhenoAge, (±PC)GrimAge, (±PC)Horvath1, (±PC)Hannum, PCDNAmTL and DunedinPACE. +PC represents the use of the principal component adjusted version of the clock.

  Dataset EGAD50000002063

• shallow whole genome sequencing BAM files aligned to the human reference genome GRCh38

  We profiled large B-cell lymphoma (LBCL) patient plasma samples with ultra-low-pass (shallow) whole genome sequencing. The DNA sequencing was performed on pre-capture genomic libraries, with an intended mean coverage of at least 0.1X, FASTQ files were cleaned by fastp and mapped to the reference human genome (GRCh38) with bwa.

  Dataset EGAD50000001497

• Single cell RNA seq component of ATAC-RNA multiome analysis of a four weeks post conception embryo head

  Four single-cell RNA libraries were generated from an unbiased sample of cells of a human four weeks post conception embryo using the 10X Chromium Single-Cell Instrument and NextGEM Single Cell Multiome ATAC+Gene Expression kit (10X Genomics) according to the manufacturer’s protocol.

  Dataset EGAD50000001501

• Single cell ATAC seq component of ATAC-RNA multiome analysis of a four weeks post conception embryo head

  Four single-cell ATAC libraries were generated from an unbiased sample of cells of a human four weeks post conception embryo using the 10X Chromium Single-Cell Instrument and NextGEM Single Cell Multiome ATAC+Gene Expression kit (10X Genomics) according to the manufacturer’s protocol.

  Dataset EGAD50000001502

• Tumor Profiler Project - OV cell-free DNA data

  The dataset contains amplicon sequencing data from 48 samples from 35 different patients with ovarian cancers. Cell free DNA was collected from plasma. Sequencing was performed on an Ion Torrent platform and the sequencing data is provided in bam format.

  Dataset EGAD50000001410

• SIA Subtyping TSO500 (Targetted Sequencing)

  Associated with Molecular classification of small intestinal adenocarcinomas. TSO500 Targetted sequencing panel generated 292 .fastq files from 145 samples (primary and recurrent small intestine adenocarcinomas as well as normal samples) from 133 patients. TruSight Oncology 500 (TSO500; Illumina, San Diego, USA) high-throughput assays were run on genomic DNA samples through next-generation sequencing (NGS) on Illumina’s NovaSeq6000 at GenomeScan.

  Dataset EGAD50000001761

• MS meninges single nuclei RNA sequencing

  10X 3' (RNA) samples of isolated single nuclei from highly inflamed leptomeninges and adjacent grey matter from 3 MS patients used in the paper.

  Dataset EGAD50000001235

• A thymic ILC1-like progenitor with differentiation potential towards KIR+NKG2A- NK cells

  The dataset contains bulk RNA sequencing data from 12 pediatric thymus samples collected during cardiac surgeries. These samples represent immunologically healthy donors with a mean age of 6 months. The sequencing was performed using Illumina HiSeq4000, and the processed files are available in standard formats such as FASTQ.

  Dataset EGAD50000001120