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• BLUEPRINT release August 2016, RNA-Seq for macrophage - T=6days B-glucan, on genome GRCh38

  RNA-Seq data for 4 macrophage - T=6days B-glucan sample(s). 4 run(s), 4 experiment(s), 4 analysis(s) on human genome GRCh38. Part of BLUEPRINT release August 2016. Analysis documentation available at http://ftp.ebi.ac.uk/pub/databases/blueprint/releases/20160816/homo_sapiens/README_rnaseq_analysis_crg_20160816

  Dataset EGAD00001002522

• The dataset for Genome-wide cell-free DNA fragmentation in patients with cancer

  The dataset for Genome-wide cell-free DNA fragmentation in patients with cancer includes 538 bam files from whole genome next-generation sequencing on the Illumina HiSeq2500. The samples analyzed include plasma samples from healthy individuals and patients with cancer.

  Dataset EGAD00001005339

• Validation data for the SV analysis package: GRIDSS, PURPLE, LINX

  Validation data containing sequencing data of 13 samples. An hybrid capture approach was used to validate findings of both Manta and GRIDSS for the samples in the validation set. The dataset also contains the reference sequences used.

  Dataset EGAD00001005525

• Human tumour ChIP-seq.

  We profiled 16 patient tumour samples by ChIP-seq. H3K27ac and Input are provided for 16 samples and H3K27me3 is provided for 14 samples. Among the 16 samples, 9 are G34WT and 7 are G34R/V. The raw fastq or bam files are provided.

  Dataset EGAD00001006100

• Genomic and transcriptomic data of glioma specimens

  Dataset consists of 207 glioma samples of WHO grades II, III and IV. Dataset consists 182 tumor derived genomic data of ~700 cancer-related and epigenetic-related genes with matched blood samples for 48 specimens. Dataset also consists transcriptomic data for 105 specimens. In total 335 bam files were deposited.

  Dataset EGAD00001006299

• Associate Vice President for Research Administration & Director

  Dac EGAC00001003114

• DAC for Duke-NUS genomic sequencing projects

  Dac EGAC00001000256

• DAC for Whole Genome Sequencing of ASD quartet families

  Dac EGAC00001000288

• The Shlien Lab, The Hospital for Sick Children

  Dac EGAC00001000289

• DAC for IGMM / Usher Institute, University of Edinburgh

  Dac EGAC00001000365

• DAC for esophageal squamous cell carcinoma genomic data

  Dac EGAC00001000444

• MacFeeters Hamilton Centre for Neuro-Oncology Research (MHC-NOR)

  Dac EGAC00001000510

• DAC for Dave Lab, Duke University

  Dac EGAC00001000538

• DAC for Single Cell Transcriptomics of Colorectal Cancer

  Dac EGAC00001000550

• Data access committee for BAMS exome sequencing data.

  Dac EGAC00001000583

• DAC for DCM-cases (149 human DCM samples)

  Dac EGAC00001000673

• DAC for DCM-controls (113 human non-DCM samples)

  Dac EGAC00001000674

• DAC for AA HCC patient from National Taiwan University

  Dac EGAC00001000708

• Institut Jules Bordet Data Access Committee for EGAS00001002685 study

  Dac EGAC00001000748

• Data Access Committee for Tumor Progression Study at Karolinska Institute

  Dac EGAC00001000778

• DAC for Institute of Human Genetics, Bonn, AGA Project

  Dac EGAC00001000831

• DAC for study Hypothalamic transcriptome in Prader-Willi syndrome

  Dac EGAC00001000869

• DAC for Genomic landscpae of Chordoid Glioma study

  Dac EGAC00001000906

• Data Access Committee for the Medulloblastoma Host Genome Study

  Dac EGAC00001000910

• Data Access Committee for Niigata-NIG collaborative work

  Dac EGAC00001000955