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BLUEPRINT Bisulfite-seq (CNAG)

Bisulfite-Seq

Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data

Dataset ID Description Technology Samples
EGAD00001000672 Illumina HiSeq 2000 3
EGAD00001000673 Illumina HiSeq 2000 12
EGAD00001000710 Illumina HiSeq 2000 4
EGAD00001000909 Illumina HiSeq 2000 1
EGAD00001000910 Illumina HiSeq 2000 1
EGAD00001000914 Illumina HiSeq 2000 3
EGAD00001000917 Illumina HiSeq 2000 1
EGAD00001000920 Illumina HiSeq 2000 1
EGAD00001000921 Illumina HiSeq 2000 1
EGAD00001000923 Illumina HiSeq 2000 1
EGAD00001000927 Illumina HiSeq 2000 1
EGAD00001000932 Illumina HiSeq 2000 1
EGAD00001000934 Illumina HiSeq 2000 2
EGAD00001000935 Illumina HiSeq 2000 6
EGAD00001000941 Illumina HiSeq 2000 6
EGAD00001000943 Illumina HiSeq 2000 1
EGAD00001001128 Illumina HiSeq 2000 3
EGAD00001001131 Illumina HiSeq 2000 1
EGAD00001001133 Illumina HiSeq 2000 2
EGAD00001001134 Illumina HiSeq 2000 1
EGAD00001001135 Illumina HiSeq 2000 2
EGAD00001001139 Illumina HiSeq 2000 3
EGAD00001001141 Illumina HiSeq 2000 1
EGAD00001001143 Illumina HiSeq 2000 4
EGAD00001001150 Illumina HiSeq 2000 1
EGAD00001001151 Illumina HiSeq 2000 1
EGAD00001001152 Illumina HiSeq 2000 2
EGAD00001001157 Illumina HiSeq 2000 3
EGAD00001001160 Illumina HiSeq 2000 1
EGAD00001001162 Illumina HiSeq 2000 1
EGAD00001001167 Illumina HiSeq 2000 3
EGAD00001001176 Illumina HiSeq 2000 1
EGAD00001001180 Illumina HiSeq 2000 2
EGAD00001001189 Illumina HiSeq 2000 4
EGAD00001001192 Illumina HiSeq 2000 5
EGAD00001001200 Illumina HiSeq 2000 1
EGAD00001001201 Illumina HiSeq 2000 6
EGAD00001001203 Illumina HiSeq 2000 1
EGAD00001001205 Illumina HiSeq 2000 3
EGAD00001001206 Illumina HiSeq 2000 6
EGAD00001001261 Illumina HiSeq 2000 2
EGAD00001001304 Illumina HiSeq 2000 10
EGAD00001001473 Illumina HiSeq 2000 2
EGAD00001001479 Illumina HiSeq 2000 1
EGAD00001001482 Illumina HiSeq 2000 6
EGAD00001001484 Illumina HiSeq 2000 2
EGAD00001001486 Illumina HiSeq 2000 2
EGAD00001001491 Illumina HiSeq 2000 6
EGAD00001001493 Illumina HiSeq 2000 1
EGAD00001001494 Illumina HiSeq 2000 1
EGAD00001001497 Illumina HiSeq 2000 2
EGAD00001001498 Illumina HiSeq 2000 5
EGAD00001001507 Illumina HiSeq 2000 1
EGAD00001001509 Illumina HiSeq 2000 1
EGAD00001001510 Illumina HiSeq 2000 2
EGAD00001001516 Illumina HiSeq 2000 3
EGAD00001001522 Illumina HiSeq 2000 2
EGAD00001001529 Illumina HiSeq 2000 1
EGAD00001001530 Illumina HiSeq 2000 1
EGAD00001001537 Illumina HiSeq 2000 3
EGAD00001001541 Illumina HiSeq 2000 1
EGAD00001001548 Illumina HiSeq 2000 2
EGAD00001001553 Illumina HiSeq 2000 1
EGAD00001001556 Illumina HiSeq 2000 1
EGAD00001001563 Illumina HiSeq 2000 1
EGAD00001001564 Illumina HiSeq 2000 1
EGAD00001001565 Illumina HiSeq 2000 1
EGAD00001001567 Illumina HiSeq 2000 1
EGAD00001001571 Illumina HiSeq 2000 4
EGAD00001001575 Illumina HiSeq 2000 8
EGAD00001001583 Illumina HiSeq 2000 1
EGAD00001001585 Illumina HiSeq 2000 6
EGAD00001001587 Illumina HiSeq 2000 1
EGAD00001001590 Illumina HiSeq 2000 4
EGAD00001001591 Illumina HiSeq 2000 7
EGAD00001002284 Illumina HiSeq 2000 3
EGAD00001002291 Illumina HiSeq 2000 1
EGAD00001002294 Illumina HiSeq 2000 2
EGAD00001002301 Illumina HiSeq 2000 1
EGAD00001002302 Illumina HiSeq 2000 1
EGAD00001002303 Illumina HiSeq 2000 3
EGAD00001002305 Illumina HiSeq 2000 6
EGAD00001002309 Illumina HiSeq 2000 2
EGAD00001002311 Illumina HiSeq 2000 2
EGAD00001002313 Illumina HiSeq 2000 7
EGAD00001002322 Illumina HiSeq 2000 5
EGAD00001002324 Illumina HiSeq 2000 1
EGAD00001002325 Illumina HiSeq 2000 2
EGAD00001002327 Illumina HiSeq 2000 1
EGAD00001002330 Illumina HiSeq 2000 1
EGAD00001002331 Illumina HiSeq 2000 3
EGAD00001002333 Illumina HiSeq 2000 2
EGAD00001002335 Illumina HiSeq 2000 1
EGAD00001002346 Illumina HiSeq 2000 2
EGAD00001002354 Illumina HiSeq 2000 3
EGAD00001002361 Illumina HiSeq 2000 3
EGAD00001002364 Illumina HiSeq 2000 2
EGAD00001002367 Illumina HiSeq 2000 2
EGAD00001002370 Illumina HiSeq 2000 2
EGAD00001002371 Illumina HiSeq 2000 1
EGAD00001002373 Illumina HiSeq 2000 1
EGAD00001002378 Illumina HiSeq 2000 3
EGAD00001002383 Illumina HiSeq 2000 2
EGAD00001002385 Illumina HiSeq 2000 1
EGAD00001002392 Illumina HiSeq 2000 4
EGAD00001002393 Illumina HiSeq 2000 3
EGAD00001002394 Illumina HiSeq 2000 1
EGAD00001002395 Illumina HiSeq 2000 2
EGAD00001002396 Illumina HiSeq 2000 6
EGAD00001002403 Illumina HiSeq 2000 4
EGAD00001002404 Illumina HiSeq 2000 2
EGAD00001002405 Illumina HiSeq 2000 1
EGAD00001002407 Illumina HiSeq 2000 2
EGAD00001002410 Illumina HiSeq 2000 1
EGAD00001002412 Illumina HiSeq 2000 3
EGAD00001002416 Illumina HiSeq 2000 3
EGAD00001002419 Illumina HiSeq 2000 19
EGAD00001002423 Illumina HiSeq 2000 2
EGAD00001002427 Illumina HiSeq 2000 2
EGAD00001002428 Illumina HiSeq 2000 3
EGAD00001002429 Illumina HiSeq 2000 6
EGAD00001002432 Illumina HiSeq 2000 1
EGAD00001002434 Illumina HiSeq 2000 2
EGAD00001002437 Illumina HiSeq 2000 2
EGAD00001002440 Illumina HiSeq 2000 1
EGAD00001002441 Illumina HiSeq 2000 1
EGAD00001002447 Illumina HiSeq 2000 1
EGAD00001002451 Illumina HiSeq 2000 2
EGAD00001002460 Illumina HiSeq 2000 8
EGAD00001002464 Illumina HiSeq 2000 2
EGAD00001002472 Illumina HiSeq 2000 1
EGAD00001002475 Illumina HiSeq 2000 1
EGAD00001002483 Illumina HiSeq 2000 2
EGAD00001002486 Illumina HiSeq 2000 2
EGAD00001002492 Illumina HiSeq 2000 2
EGAD00001002496 Illumina HiSeq 2000 4
EGAD00001002497 Illumina HiSeq 2000 3
EGAD00001002501 Illumina HiSeq 2000 6
EGAD00001002502 Illumina HiSeq 2000 1
EGAD00001002505 Illumina HiSeq 2000 5
EGAD00001002508 Illumina HiSeq 2000 9
EGAD00001002511 Illumina HiSeq 2000 3
EGAD00001002519 Illumina HiSeq 2000 2
EGAD00001002520 Illumina HiSeq 2000 4
EGAD00001002521 Illumina HiSeq 2000 5
EGAD00001002523 Illumina HiSeq 2000 6
EGAD00001002693 Illumina HiSeq 2000 NextSeq 500 unspecified 71
EGAD00001002969 Illumina HiSeq 2000 1
EGAD00001004046 Illumina HiSeq 2000 NextSeq 500 303
Publications Citations
Whole-epigenome analysis in multiple myeloma reveals DNA hypermethylation of B cell-specific enhancers.
Genome Res 25: 2015 478-487
81
Whole-genome fingerprint of the DNA methylome during human B cell differentiation.
Nat Genet 47: 2015 746-756
188
Information recovery from low coverage whole-genome bisulfite sequencing.
Nat Commun 7: 2016 11306
23
Exercise training alters the genomic response to acute exercise in human adipose tissue.
Epigenomics 10: 2018 1033-1050
37
Chromatin-Based Classification of Genetically Heterogeneous AMLs into Two Distinct Subtypes with Diverse Stemness Phenotypes.
Cell Rep 26: 2019 1059-1069.e6
19
DAMEfinder: a method to detect differential allele-specific methylation.
Epigenetics Chromatin 13: 2020 25
8
Chromatin activation as a unifying principle underlying pathogenic mechanisms in multiple myeloma.
Genome Res 30: 2020 1217-1227
27
Dynamics of genome architecture and chromatin function during human B cell differentiation and neoplastic transformation.
Nat Commun 12: 2021 651
46
Evolution of DNA methylome from precancerous lesions to invasive lung adenocarcinomas.
Nat Commun 12: 2021 687
23
Determining subpopulation methylation profiles from bisulfite sequencing data of heterogeneous samples using DXM.
Nucleic Acids Res 49: 2021 e93
6
The DNA methylation landscape of multiple myeloma shows extensive inter- and intrapatient heterogeneity that fuels transcriptomic variability.
Genome Med 13: 2021 127
9
Enhanced epigenetic profiling of classical human monocytes reveals a specific signature of healthy aging in the DNA methylome.
Nat Aging 1: 2021 124-141
17
Single-cell Atlas of common variable immunodeficiency shows germinal center-associated epigenetic dysregulation in B-cell responses.
Nat Commun 13: 2022 1779
15
Benchmarking of methods for DNA methylome deconvolution.
Nat Commun 15: 2024 4134
1