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13384 results for ""pdc"+"heritage+language"+census+study"

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blog dac dataset documentation study

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Federated ega

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Study type

affected sib pairs aggregate genomic data amplicon sequencing atac sequencing cancer genomics case set case-cohort case-control clinical cohort clinical diagnostic testing clinical genetic testing clinical trial cohort collection community control set controlled trial copy number variation (cnv) cross-sectional double-blind electronic medical records epigenetics eqtl exome sequencing extended pedigrees family family linkage forensic or paleo-genomics full transcriptome sequencing gene regulation study genotype genotype/expression genotype/expression array gwas individual-level genomic data interventional longitudinal longitudinal cohort marker discovery mendelian meta-analysis metagenomics metastasis methods development mixed multicenter multiplex families nested case-control nuclear families observational other parent-offspring parent-offspring trios partial factorial randomized phase iii placebo-controlled pooled clone sequencing population population genomics population-based control set probands prospective quantitative cross-sectional randomized randomized controlled clinical trial reference set resequencing rna sequencing rnaseq sequencing sibling cohort single cell analysis single cell rna sequence single cell rna sequencing single patient snp array analysis stem cell lines synthetic genomics targeted capture sequence transcriptome analysis transcriptome sequencing transcriptome sequencing (tumor only) tumor tumor vs. matched-normal twin virus capture sequencing whole genome sequencing whole-genome bisulfite sequencing xenograft

Dataset types

amplicon sequencing chip-seq chromatin accessibility profiling by high-throughput sequencing exome sequencing genomic variant calling genotyping by array histone modification profiling by high-throughput sequencing methylation binding domain sequencing methylation profiling by high-throughput sequencing phenotype information study summary information transcriptome profiling by array transcriptome profiling by high-throughput sequencing whole genome sequencing

Dataset technologies

ab 3730xl genetic analyzer ab 5500xl genetic analyzer ab solid 4 system affy mirna 3.0 array affymetrics axiom snp array 2.0 affymetrix affymetrix 6.0 array affymetrix 6.0; cytoscan affymetrix axiom genome-wide asi 1 array affymetrix axiom genome-wide human origins array affymetrix biobank array affymetrix oncoscan ffpe express affymetrix, thermo fisher scientific agilent human mirna microarray axiom uk biobank array bgiseq-500 clariomâ„¢ d human assay complete genomics coreexome illumina snp chip array dnbseq-g400 dnbseq-t7 epic beadchip hiseq x five hiseq x ten human cardio metabochip human clariom d arrays human genome u219 array plate humanht-12 illumina (epic array) illumina 450k illumina cardio-metabochip illumina genome analyzer illumina genome analyzer ii illumina genome analyzer iix illumina global screening array illumina gsa v1.0 illumina hiseq 1000 illumina hiseq 1500 illumina hiseq 2000 illumina hiseq 2500 illumina hiseq 3000 illumina hiseq 4000 illumina hiseq x illumina human omni1-quad beadchip. illumina humancoreexome beadchip array illumina humancoreexome-12v1-1_a illumina humancoreexome-24v1-0 illumina humancoreexome-24v1-1 illumina humanmethylation450 illumina humanomni1-quad_v1-0 illumina humanomni1-quad_v1-0, humanomniexpress-12-v1-0, humanomniexpress-24-v1-1, humanomni25-8v1-2_a1 illumina humanomni2.5 illumina humanomni2.5-8 illumina humanomni5-quad and exome sequencing illumina humanomniexpress-12 illumina humanomniexpress-12-v1-0 illumina humanomniexpress-24-v1-1 illumina humanwg-6 illumina humanwg-6 version 3 or illumina humanht-12 expression bead chip, combined on identical nucleotide universal identifiers. illumina infinium epic illumina infinium h3africa (v2) with custom add-ons illumina infinium immunochip illumina infiniumomniexpressexome-8 illumina mega array illumina methylationepic v2.0 illumina miniseq illumina miseq illumina novaseq 6000 illumina novaseq x illumina novaseq x plus illumina omni 2.5 illumina omni 2.5m illumina oncoarray illumina sangerddd_omniexplusv1_15019773 infinium gsa infinium methylationepic array ion genestudio s5 ion torrent pgm ion torrent proton ion torrent s5 xl llumina 2.5-8 minion nextseq 2000 nextseq 500 nextseq 550 nimblegen hg18 cgh 385k omniexpress omniexpress-24 v1.1 pacbio rs ii promethion qexactive plus revio sanger sequencing sequel sequel ii sequel iie sequenom massarray (agena bioscience) somascan 1.3k proteomic assay uk biobank axiomâ„¢ array unspecified

Phenotypes

CHEBI:33699 CL:0000037 CL:0000084 CL:0000094 CL:0000235 CL:0000576 CL:0000837 CL:0000863 CL:0000890 CL:0002057 EFO:0000094 EFO:0000209 EFO:0000211 EFO:0000220 EFO:0000222 EFO:0000272 EFO:0000275 EFO:0000280 EFO:0000285 EFO:0000309 EFO:0000322 EFO:0000330 EFO:0000339 EFO:0000349 EFO:0000403 EFO:0000478 EFO:0000519 EFO:0000565 EFO:0000574 EFO:0000586 EFO:0000609 EFO:0000632 EFO:0000637 EFO:0000693 EFO:0000980 EFO:0001461 EFO:0001663 EFO:0001905 EFO:0002001 EFO:0002002 EFO:0002422 EFO:0002499 EFO:0002508 EFO:0002539 EFO:0002759 EFO:0002939 EFO:0002966 EFO:0003025 EFO:0003094 EFO:0003885 EFO:0003897 EFO:0003940 EFO:0004281 EFO:0005023 EFO:0005543 EFO:0005699 EFO:0005704 EFO:0005705 EFO:0005706 EFO:0005707 EFO:0005708 EFO:0005709 EFO:0005710 EFO:0005711 EFO:0005712 EFO:0005740 EFO:0005922 EFO:0006545 EFO:0009119 EFO:0009121 EFO:0009443 EFO:0010064 EFO:1000028 EFO:1000042 EFO:1000068 EFO:1000069 EFO:1000177 EFO:1000180 EFO:1000231 EFO:1000238 EFO:1000327 EFO:1000490 EFO:1001480 EFO:1001514 EFO:1001515 EFO:1001830 EFO:1001956 EFO:1001958 EFO:1002008 HP:0000001 HP:0000002 HP:0000008 HP:0000009 HP:0000010 HP:0000014 HP:0000020 HP:0000022 HP:0000023 HP:0000028 HP:0000032 HP:0000035 HP:0000036 HP:0000045 HP:0000047 HP:0000049 HP:0000062 HP:0000069 HP:0000073 HP:0000076 HP:0000077 HP:0000078 HP:0000079 HP:0000085 HP:0000086 HP:0000089 HP:0000098 HP:0000100 HP:0000104 HP:0000107 HP:0000110 HP:0000118 HP:0000119 HP:0000121 HP:0000125 HP:0000126 HP:0000137 HP:0000138 HP:0000152 HP:0000153 HP:0000154 HP:0000157 HP:0000159 HP:0000160 HP:0000161 HP:0000162 HP:0000163 HP:0000164 HP:0000168 HP:0000172 HP:0000174 HP:0000175 HP:0000176 HP:0000177 HP:0000178 HP:0000179 HP:0000185 HP:0000193 HP:0000202 HP:0000212 HP:0000215 HP:0000218 HP:0000219 HP:0000220 HP:0000233 HP:0000234 HP:0000235 HP:0000236 HP:0000238 HP:0000239 HP:0000240 HP:0000243 HP:0000248 HP:0000252 HP:0000253 HP:0000256 HP:0000260 HP:0000268 HP:0000270 HP:0000271 HP:0000276 HP:0000277 HP:0000278 HP:0000280 HP:0000284 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Duo

0000001 0000004 0000005 0000006 0000007 0000011 0000012 0000014 0000015 0000016 0000017 0000018 0000019 0000020 0000021 0000022 0000024 0000025 0000026 0000027 0000028 0000029 0000042 0000043 0000044 0000045 0000046

Clear

MSI_Cancer_Models___WGS

The study will use whole genome sequencing to aid in define determinants of WRN dependency in MSI Cancer models.
Study EGAS00001004178
CARE iSGS single nucleus RNA-seq

This study contains single nucleus RNA-sequencing data from healthy controls, iSGS, and traumatic subglottic stenosis patients.
Study EGAS50000000878
Exome and RNA sequencing of Greenlanders

This study contains whole exome sequence of 27 Greenlanders and deep RNA sequencing of 17 Greenlanders
Study EGAS00001002727
subset of WGS data from umbrella study EGAS00001004338, used in EGAS00001004786

linking 58 samples/58 runs of WGS from EGAS00001004338 Umbrella study to EGAS0001004786 study
Dataset EGAD00001006614
Assessing mitochondrial bioenergetics in coronary artery disease: A translational left ventricular tissue study in humans (The AMBITION study).

Single nuclei transcriptomic data from the AMBITION study.
Dataset EGAD00001011078
WTCCC case-control study for Hypertension - Combined Controls

WTCCC genome-wide case-control association study for Hypertension (HT) using six disease collections together with the 1958 British Birth Cohort and the UK National Blood Service collections as controls.
Study EGAS00000000010
Exome sequencing of patient samples from study

Exome sequencing data from FFPE preserved patient samples and patient-derived cultures. The goal of the study is to validate patient-derived cultures. Additional goal is to understand the relationship between omics and drug response.
Study EGAS50000000171
SNP array study in Autism Spectrum Disorder patients

The aim of this study was to investigate two ancestral inversions (inv17q21.31 and inv8p23.1) in Autism Spectrum Disorder (ASD) patients. We have performed SNP array in order to genotype these inversions using the package scoreInvHap.
Study EGAS00001005606
LifeLines-NEXT pilot study

The pilot study from the LifeLines-NEXT (NEXT) cohort consisting of 30 mother-infant pairs with longitudinal sampling from pregnancy till 3 months after birth. Shotgun data is available for virome and microbiome annotation.
Study EGAS00001005969
NHLBI TOPMed - NHGRI CCDG: Massachusetts General Hospital (MGH) Atrial Fibrillation Study

The Massachusetts General Hospital (MGH) Atrial Fibrillation Study was initiated in 2001. The study has enrolled serial probands, unaffected and affected family members with atrial fibrillation. At enrollment participants undergo a structured interview to systematically capture their past medical history, AF treatments, and family history. An electrocardiogram is performed; the results of an echocardiogram are obtained; and blood samples are obtained. For the TOPMed WGS project only early-onset atrial fibrillation cases were sequenced. Early-onset atrial fibrillation was defined as an age of onset prior to 66 years of age. Comprehensive phenotypic and pedigree data for study participants are available through dbGaP phs001001.
Study phs001062

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