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• DAC_MATCH-R molecular driver

  Data access committee for MATCH-R molecular driver study

  Dac EGAC50000000335

• human HYPOMAP

  Data access for HYPOMAP raw sequence data and result data objects

  Dac EGAC50000000410

• CITE-seq for peripheral blood samples of 5 breast cancer patients

  Study EGAS00001006241

• DAC for DNA methylation data (iMED, BCG prime, and 500FG)

  Dac EGAC00001003534

• human biopsies

  DAC for human samples derived from biopsies from patients with hydrocephaly.

  Dac EGAC50000000625

• Validation study of genome-wide polygenic score for body mass index in South Asians

  Dac EGAC00001003593

• CoV2 challenge data

  Repository containing the transcriptomic data for the CoV2 challenge study

  Dac EGAC50000000391

• H3N2 challenge data

  Repository containing the transcriptomic data for the H3N3 challenge study

  Dac EGAC50000000379

• Exome

  Exome Seq for EGAS00001001845

  Dataset EGAD00001002160

• Validation of cfDNA fragmentome analyses for early detection of liver cancer

  Study EGAS00001008111

• Nanopore sequencing of brain tumor tissue obtained by cavitating ultrasonic aspiration

  This dataset contains 21 pediatric brain tumor cases which where obtained during surgery using a cavitating ultrasonic aspiration and submitted to nanopore whole genome sequencing.

  Dataset EGAD50000000269

• OXEL pilot WES data

  This dataset contains aligned BAM files from whole-exome sequencing of 29 patients from the Oxel pilot study. Alignment to GRCh38 reference genome was performed using the BWA aligner.

  Dataset EGAD50000000327

• Targeted sequencing of genomics regions of interest in depression and obesity

  Data corresponding to the fastq of the 654 individuals included in the study.

  Dataset EGAD50000000476

• RNA Sequencing of Control and Myotonic Dystrophy Type 1 Cells During Myogenic Differentiation

  RNAseq data of 30 muscle cell samples (proliferating myoblasts to differentiating myotubes) of immortalized control cells, and myotonic dystrophy type 1 (DM1) patient-derived cells and their edited versions.

  Dac EGAC50000000592

• MD Anderson Cancer Center HGSOC LRS Data Access Comittee

  Oxford Nanopore long-read sequencing was performed on six paired tumor-normal samples from patients with high-grade serous ovarian carcinoma. Reads were mapped to the GRCh38 reference genome, incorporating base modification information.

  Dac EGAC50000000597

• B-cell precursor acute lymphoblastic leukemia acute lymphoblastic leukemia Micro-C sequencing data Data Access Committee

  This dataset included 33 childhood B-cell precursor (BCP) acute lymphoblastic leukemia Micro-C samples. All samples were subjected to Illumina pair-end sequencing.

  Dac EGAC50000000467

• Germline WES data of pediatric cancer patients

  This dataset includes bam files (aligned to hg38) from the germline of pediatric cancer patients.

  Dataset EGAD00001008763

• RAD21-ChIP-Seq of cohesin-mutated and wildtpye adult AMLs

  ChIP-Seq targeting the major cohesin core subunit RAD21 to represent cohesin occupancy and binding sites in cohesin-mutated (STA2 or RAD21 mutations) and wildtpye adult AMLs.

  Dataset EGAD00001011199

• GEL WGS Comparison

  These samples are to be analysed with the CGP Developed cancer panel and the results will be compared with WGS data from 4 different comercial providers.

  Dataset EGAD00001000872

• Plasma-Seq follow-up CSPC4

  We performed serial plasma-Seq analyses on a male who progressed from castration-sensitive to castration-resistant prostate cancer within 10 months following treatment with androgen-deprivation therapy.

  Dataset EGAD00001000396

• Genetic factors underlying premature coronary heart disease in patients with normal coronary arteries

  The study will analyse by exome sequencing 42 Greek patients with premature MI and no vessel disease to identify genetic factors underlying this condition.

  Dataset EGAD00001000402

• Case Report of a Leukemic Patient with Invasive Mucormycosis

  Whole exome sequencing of germline DNA was performed and subsequent polymorphisms in genes known and putatively involved in the innate immune response to fungi were identified

  Dataset EGAD00001001692

• subset of WES data from umbrella study EGAS00001004338, used in EGAS00001004786

  linking 82 samples/82 runs of WES from EGAS00001004338 Umbrella study to EGAS0001004786 study

  Dataset EGAD00001006613

• Dataset for neuroendocrine_adrenal_tumor-RNA

  Rare cancer sequencing data of 145 runs in tumor/control pairs, which were uploaded to umbrella studies. The sequencing was always paired

  Dataset EGAD00001008862

• A Tumour Organoid Biobank for Mapping Cancer Cell Vulnerabilities - WGS

  Whole genome sequencing data from cancer patient-derived organoids and their matched tumour tissue samples. Part of a study to include genomic and transcriptomic sequencing data, along with CRISPR screening data from cancer patient-derived organoids and matched tumour tissues. Some organoids were developed as part of the Human Cancer Models Initiative (HCMI) in collaboration with Cancer Research UK (CRUK). The study includes organoids derived from colorectal, oesophageal, ovarian, pancreatic, and stomach cancer samples.

  Dataset EGAD00001015469