15169 results for "cancer studies using rna-seq"

in 22.63 milliseconds.

• Access to aligned sequencing data for study "Loss of SNAI2 in prostate cancer correlates with clinical response to androgen deprivation therapy".

  Dac EGAC00001001809

• The study of response to EGFR Blockade in Colorectal Cancer

  Dataset EGAD00001001628

• The study of response to EGFR Blockade in Colorectal Cancer

  Dataset EGAD00001001674

• Time series analysis of neoadjuvant chemotherapy and bevacizumab treated breast carcinomas reveals a systemic shift in genomic aberrations

  Study EGAS00001003287

• Characterization of T cell tumor infiltration in brain metastases through the analysis of the cerebrospinal fluid

  Study EGAS00001004751

• Mutations in ALK signaling pathways conferring resistance to ALK inhibitor treatment lead to collateral vulnerabilities in neuroblastoma cells

  Study EGAS00001005791

• Molecular determinants of outcomes in relapsed mantle cell lymphoma treated with ibrutinib or temsirolimus in the MCL3001 (RAY) trial

  Study EGAS00001006342

• Complex patterns of genomic heterogeneity identified in 42 tumor samples and ctDNA of a pulmonary atypical carcinoid patient

  Study EGAS00001006530

• The data access committee for Genome-wide analyses of cell-free DNA for therapeutic monitoring of patients with pancreatic cancer

  Dac EGAC50000000588

• Evolution_of_the_cancer_epigenome_in_myeloproliferative_neoplasms_2

  Whole genome sequencing and bisulphite sequencing of haematopoietic colonies

  Study EGAS00001002372

• Kings_Hepatoblastoma_Behjati_RNA_Managed_Access

  A study of the development of liver based tumours.

  Study EGAS00001006876

• CPC-GENE Prostate Cancer Heterogeneity Study

  Raw sequence data, fastq format

  Dataset EGAD00001002885

• Chordoma Extension (known cancer genes)

  Extension analysis to pursue candidate genes of interest in chordoma

  Dataset EGAD00001001239

• Global Anaplastic Thyroid Cancer Initiative

  Raw exome sequence data(fastq) for the GATCI project

  Dataset EGAD00001003235

• Metastatic Prostate Follow Up

  Validation/deeper sequencing for metastatic prostate cancer samples

  Dataset EGAD00001000988

• MPN_Genomes_validation_and_interim_samples

  MPN genome variant validation and interrogation of interim timepoints.

  Study EGAS00001000766

• Metagenomic characterization of tracheal aspirates from non-pulmonary sepsis patients

  Metagenomic characterization of tracheal aspirates from non-pulmonary sepsis patients. This dataset consists of non-human read data from shotgun sequencing in sepsis case samples from lung aspirates. The dataset consist of 32 paired FASTQ files sequenced in paired-read mode 2x150 bp using an Illumina HiSeq 4000 sequencer.

  Dataset EGAD50000000561

• A first step towards clinical routine long-read sequencing in Sweden, a national pilot study on chromosomal rearrangements

  PacBio HiFi Revio WGS data from 16 individuals sequenced in the Genomic Medicine Sweden (GMS) Long read project. Each individual was sequenced on one PacBio Revio SMRT cell. The DNA was extracted from blood. The HiFi data was aligned to GRCh38 using minimap2 or the SMRT-link software.

  Dataset EGAD50000000676

• Single-cell somatic copy number variants in brain using different amplification methods and reference genomes

  Low coverage paired end Illumina WGS from cells amplified with Picoplex, PTA, and droplet MDA. Two brains with Multiple System, Atrophy, one control, and non-brain controls (fibroblasts, NA12878)

  Study EGAS50000000020

• Development of a rapid and comprehensive genomic profiling test supporting diagnosis and research for gliomas

  Targeted sequencing dataset used for the paper entitled "Development of a rapid and comprehensive genomic profiling test supporting diagnosis and research for gliomas". The cohort includes 53 cases of targeted DNA squencing, 15 of them have matched control sequences. The capture panel was made by Agilent SureSelect and the sequence was performed using DNBSEQ or Illumina sequencer.

  Dataset EGAD50000000979

• EDi019-A / SAMEA4774918 WGS data

  The iPSC line EDi019-A / SAMEA4774918 has undergone whole genome sequencing. Whole genome sequencing was done using Illumina HiSeq X Five platform with a reference genome of GRCh38. Raw data as FASTQ files and analysed data as CRAM files are available for this sample, in this dataset. The iPSC line EDi019-A is available for research use at www.EBiSC.org.

  Dataset EGAD50000001029

• RCi009-A / SAMEA4339688 WGS data

  The iPSC line RCi009-A / SAMEA4339688 has undergone whole genome sequencing. Whole genome sequencing was done using Illumina HiSeq X Five platform with a reference genome of GRCh38. Raw data as FASTQ files and analysed data as CRAM files are available for this sample, in this dataset. The iPSC line RCi009-A is available for research use at www.EBiSC.org.

  Dataset EGAD50000001030

• EDi018-A / SAMEA4771918 WGS data

  The iPSC line EDi018-A / SAMEA4771918 has undergone whole genome sequencing. Whole genome sequencing was done using Illumina HiSeq X Five platform with a reference genome of GRCh38. Raw data as FASTQ files and analysed data as CRAM files are available for this sample, in this dataset. The iPSC line EDi018-A is available for research use at www.EBiSC.org.

  Dataset EGAD50000001027

• EDi016-A / SAMEA4562366 WGS data

  The iPSC line EDi016-A / SAMEA4562366 has undergone whole genome sequencing. Whole genome sequencing was done using Illumina HiSeq X Five platform with a reference genome of GRCh38. Raw data as FASTQ files and analysed data as CRAM files are available for this sample, in this dataset. The iPSC line EDi016-A is available for research use at www.EBiSC.org.

  Dataset EGAD50000001032

• EDi017-A / SAMEA4768918 WGS data

  The iPSC line EDi017-A / SAMEA4768918 has undergone whole genome sequencing. Whole genome sequencing was done using Illumina HiSeq X Five platform with a reference genome of GRCh38. Raw data as FASTQ files and analysed data as CRAM files are available for this sample, in this dataset. The iPSC line EDi017-A is available for research use at www.EBiSC.org.

  Dataset EGAD50000001033