22959 results for "ega"

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• CyclomicsSeq_Healthy_R9

  Contains Healthy samples sequenced on R9 flowcells

  Dataset EGAD00001010151

• CyclomicsSeq_IMCISION_R9

  Contains IMCISION samples sequenced on R9 flowcells

  Dataset EGAD00001010154

• Colorectal cancer – unmapped reads (Mutographs)

  Colorectal cancer – unmapped reads (Mutographs)

  Dataset EGAD00001015364

• HALT mRNA - RNASeq mapped reads

  HALT AML mRNA - RNASeq mapped reads

  Dataset EGAD00001003816

• LCNEC study - WGS dataset

  WGS dataset LCNEC study

  Dataset EGAD00001000977

• Metastatic Prostate Follow Up

  Validation/deeper sequencing for metastatic prostate cancer samples

  Dataset EGAD00001000988

• MMP-seq tumor samples, UDG treated (FASTQ)

  MMP-seq tumor samples, UDG treated (FASTQ)

  Dataset EGAD00001001104

• DATA FILES FOR PCGP SJMEL WXS

  DATA FILES FOR PCGP SJMEL WXS

  Dataset EGAD00001001246

• DATA FILES FOR PCGP SJMEL RNASEQ

  DATA FILES FOR PCGP SJMEL RNASEQ

  Dataset EGAD00001001247

• WGS data for NRF2 study

  WGS data for cell lines and clinical samples

  Dataset EGAD00001002244

• Summary statistics

  Summary statistics Korean PD (n=410) vs. Korean Healthy Control (n=200)

  Dataset EGAD00001009775

• Global Anaplastic Thyroid Cancer Initiative

  Raw exome sequence data(fastq) for the GATCI project

  Dataset EGAD00001003235

• Somatic mutations in angiosarcoma

  Here we present the genomes of three secondary angiosarcomas

  Dataset EGAD00001000735

• HCA Organoids | Colon - Cancer, WES

  HCA Organoids | Colon - Cancer, Whole Exome Sequencing (WES)

  Dataset EGAD00001015548

• Test dataset: Sequence and variant data from public 1000 Genomes Project

  This is a test dataset derived from public data of the 1000 Genomes Project. Its purpose is not to allow for any inference about cohort data or results, but to aid bioinformaticians in the technical development and testing of tools, as well as data consumers in learning how to access information. This dataset consists of 2508 samples from the 1000 Genomes Project (https://www.nature.com/articles/nature15393). Samples' (e.g. NA18534) data can be accessed through the IGSR portal (e.g. https://www.internationalgenome.org/data-portal/sample/NA18534) or their corresponding folder at the 1000 Genomes' FTP site (e.g. http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/data_collections/1000_genomes_project/data/CHB/NA18534/exome_alignment/). There are several different types of data this dataset encompasses: Variant Calling Format (VCF, or its binary counterparts BCF) files, both joint (e.g. ALL_chr22_20130502_2504Individuals.vcf.gz) and split (HG01775.chrY.vcf.gz); exome sequencing CRAM files (e.g. NA18534.GRCh38DH.exome.cram); whole genome sequencing CRAM/BAM files (e.g. NA19239.cram). Additionally, there are multiple files that were sliced to create shorter files, which allows for a quick download, formated as "{FILE-INFO}__{NUMBER-OF-READS}r__{CHR}.{START-COORDINATE}-{END-COORDINATE}.{FILETYPE}" (e.g. "HG01500.GRCh38DH__90r__3.10000-10500__4.10000-10500.cram"). These files can be downloaded directly through the EGA-download-client PyEGA3 (https://github.com/EGA-archive/ega-download-client).

  Dataset EGAD00001003338

• The data access committee for Single molecule genome-wide mutation profiles of cell-free DNA for non-invasive detection of cancer

  Dac EGAC00001003253

• The Nordic Centre of Excellence Programme in Molecular Medicine Data Access Committee

  Dac EGAC00000000006

• Data access agreement for ATRT

  Dac EGAC00001000306

• Tumor Genomics Committee - EGAC00001000987

  Dac EGAC00001000987

• Data Access Commitee for Schulte-Schrepping et al., 2020: Severe COVID-19 is marked by a dysregulated myeloid cell compartment

  Dac EGAC00001001684