23249 results for "ega"

in 28.90 milliseconds.

• RNA-seq data of CRC-PDX tumors

  We obtained bulk RNAseq data of CRC-PDX tumors and performed molecular subtype classification.

  Dataset EGAD50000000850

• cfDNA dataset for cfDNA cohort

  Cell free DNA sequencing data for 233 samples across multiple cancer types for cfDNA cohort

  Dataset EGAD50000000104

• USH genes sequencing

  Sequencing of a panel including the whole genomic sequence of Usher genes.

  Study EGAS50000000476

• Single-cell RNA sequencing of human IL-18R supported CAR T cells targeting oncofetal Tenascin C

  scRNA-seq raw data

  Dataset EGAD50000001134

• Biomarker Data from KATHERINE: A Phase III Study of Adjuvant Trastuzumab Emtansine versus Trastuzumab in Patients with Residual Invasive Disease after Neoadjuvant Therapy for HER2-Positive Breast Cancer

  Study EGAS00001006229

• Aggressive PDACs show hypomethylation of repetitive elements and the execution of an intrinsic IFN program linked to a ductal cell-of-origin

  Study EGAS00001004660

• GEOCODE Cohort

  Transcriptomic profile for whole blood after 24hours of stimulations

  Dataset EGAD50000001320

• Linked-read data of glioma samples

  Linked-read whole genome sequencing data of 31 glioma samples from 20 patients, including 7 matched blood samples

  Dataset EGAD50000001391

• Spatial transcriptomic analysis of renal cell carcinoma

  Spatial transcriptomic analysis of two Japanese ELOC-mutated renal cell carcinoma

  Dataset EGAD50000001400

• Whole genome sequencing of rhabdoid tumor tissue and organoids

  Dataset EGAD00001007947

• WGBS of melanoma patients

  This dataset contains WGBS of seven melanoma patients and one cultured primary melanocyte sample.

  Dataset EGAD50000001319

• Finnish - THL SUPER

  The dataset encompasses 852 Runs from the WGSPD Project 3 - Genomic Strategies to Identify High-impact Psychiatric Risk Variants Project

  Dataset EGAD50000001466

• PBAT sequencing of human embryonic stem cells

  To assess the DNA methylation landscape of naïve human embryonic stem cells derived from ERKi or control blastocysts using PXGL or UXGL media.

  Dac EGAC50000000606

• TOPARP-B patient cell-free DNA WGS

  Sequencing files for TOPARP-B patients as described in manuscript

  Study EGAS50000000280

• Whole exome sequencing for CIAO clinical trial

  Whole exome sequencing for CIAO clinical trial with tumor and paired normal tissue

  Dataset EGAD50000001674

• Whole exome sequencing for HNSCCs treated with immune checkpoint blockade

  Whole exome sequencing for HNSCCs treated with immune checkpoint blockade

  Dataset EGAD50000001675

• DAC Pediatric tumors SJD IRB

  Samples from pediatric tumors from Sant Joan de Déu, sequenced and processed by IRB Barcelona. Contact Information Núria López-Bigas bbglab@irbbarcelona.org

  Dac EGAC50000000118

• Single-nucleus RNA-sequencing of normal adrenal cortex and adrenocortical tumors

  CellRanger counts processed with the Cell Ranger software v3.1.0.

  Dataset EGAD50000000836

• Whole Exome Sequencing data of SARS-CoV-2 patients

  BAM file from Whole Exome Sequencing data of SARS-CoV-2 patients

  Dataset EGAD50000000094

• Genome Database of Latvian Population

  Access policy for the samples and data from Genome Database of Latvian Population: https://www.genomadatubaze.lv/en/conditions-for-the-issue-of-biological-materials-and-data

  Dac EGAC50000000624

• scRNAseq of ovarian cancer patient derived organoids

  scRNAseq of ovarian cancer patient derived organoids with or without estradiol

  Dataset EGAD50000002058

• WXS_TALL_t_14_16_translocation

  Whole exome-sequencing for patients with t(14;16) translocated T-ALL.

  Dataset EGAD50000001783

• Sharma/Busskamp Retinal Organoid

  DAC controlling a transcriptomic data set from retinal organoids generated with 10x chromium data, part of a publication between Sharma and Busskamp (DOI: 10.1016/j.stem.2025.12.013)

  Dac EGAC50000000487

• Single_cell_RNA_sequencing_of_rhabdomyosarcoma_tumouroids

  The aim of this study is to investigate the genomic landscape of human cancer.

  Study EGAS00001008273

• Ewing's sarcoma sequencing data

  This study shares DNA and RNA sequencing data for patients with Ewing's sarcoma

  Study EGAS00001005689

• COVID_19_Challenge_2_WOOE_RNA_Managed_Access

  Single-cell profiling of healthy adult volunteers that were inoculated with SARS-CoV-2.

  Study EGAS00001007636

• Single_cell_RNA_sequencing_of_rhabdomyosarcoma_tumour_tissue

  The aim of this study is to investigate the genomic landscape of human cancer.

  Study EGAS00001008275

• FFPE_normals_v2_gbm_wtsi_panel

  Targeted pulldown of approx 60 ffpe normal samples to use as normal controls

  Study EGAS00001002124

• Human_Developmental_Cell_Atlas_HDCA___WGS

  Single cell + bulk genomics study for immune and hematopoietic organs during human fetal development

  Study EGAS00001002929

• Whole exome sequencing of 103 pairs BLCA-CN

  We sequenced 50M exomes of 103 pairs bladder cancer of chinese

  Study EGAS00001000677

• BLUEPRINT EpiVar ChIP-seq for naive CD4+ T-cells

  BLUEPRINT EpiVar ChIP-seq for naive CD4+ T-cells

  Study EGAS00001000753

• Exome_sequencing_Parkinson_s_disease_patients

  In this project we will sequence the exomes of 250 patients with Parkinson's disease

  Study EGAS00001000151

• Childhood_arthritis_DNA

  The aim of this study is to describe the transcriptome of single arthritic cells.

  Study EGAS00001002652

• Enrichment of homologous recombination repair alteration in prostate cancer brain metastases

  Whole-exome sequencing profiling of prostate cancer brain metastases

  Study EGAS00001005091

• Kidney_tumour_RNA

  This is a bulk DNA and RNA sequencing study of human renal tumours

  Study EGAS00001002487

• Single_cell_ATAC_sequencing_of_rhabdomyosarcoma_tumour_tissue

  The aim of this study is to investigate the genomic landscape of human cancer.

  Study EGAS00001008276

• Brain_Disease_Wellcome_Leap_Delta_Tissue_RNA

  Utilising Single-Nucleus sequencing to investigate how the tumour microenvironment regulates glioblastoma cell states.

  Study EGAS00001005800

• Engineered Human Primary T Cell transcriptome study

  Study of transcriptome responses to different human T cell engineering approaches.

  Study EGAS00001006125

• Orphan_Tumour_Study_NB_sNuc_WGS

  The aim of this study is to investigate the genomic landscape of human cancer.

  Study EGAS00001006837

• Effects of nucleases on cell-free extrachromosomal circular DNA

  Effects of nucleases on cell-free extrachromosomal circular DNA

  Study EGAS00001005873

• BCG-Flu_Challenge_Study_RNAseq_Human_01

  RNA sequencing data generated from human samples collected in the BCG-Flu Challenge study.

  Study EGAS50000001677

• Exome_NanoSeq__Thyroid_

  Exome NanoSeq in thyroid from a number of donors, both healthy and with pathology.

  Study EGAS00001007175

• Targeted_NanoSeq___Thyroid

  Targeted NanoSeq in thyroid from a number of donors, both healthy and with pathology.

  Study EGAS00001007647

• Targeted capture ctDNA Library CRCQV42Run017-11

  Targeted capture ctDNA Library CRCQV42Run017-11 from patient PBC0001845, plasma 6 month sample

  Dataset EGAD00001010404

• Targeted capture ctDNA Library CRCQV42Run017-8

  Targeted capture ctDNA Library CRCQV42Run017-8 from patient PBC0001224, plasma 15 month sample

  Dataset EGAD00001010415

• Targeted capture ctDNA Library CRCQV42Run024-9

  Targeted capture ctDNA Library CRCQV42Run024-9 from patient PBC0003641, plasma baseline sample

  Dataset EGAD00001010475

• Targeted capture ctDNA Library CRCQV42Run032-8

  Targeted capture ctDNA Library CRCQV42Run032-8 from patient PBC0001589, buffy coat sample

  Dataset EGAD00001010547

• 300-Obese cohort gut microbiome data

  300-Obese cohort, Nijmegen, the Netherlands. Dataset contains gut microbiome data generated by metagenomic sequencing.

  Dataset EGAD00001005083

• Mediator ChIP-Seq datasets in human islets

  6 ChIP-Seq datasets of Mediator in human pancreatic islets from 6 donors

  Dataset EGAD00001005202

• BWA outputs from WES

  BWA outputs from whole-exome sequencing of 35 pancreatic neuroendocrine neoplasms.

  Dataset EGAD00001006992

• Targeted capture ctDNA Library CRCQV42Run039-21

  Targeted capture ctDNA Library CRCQV42Run039-21 from patient PBC0003014, plasma 3 month sample

  Dataset EGAD00001010616

• Targeted capture ctDNA Library CRCQV42Run044-18

  Targeted capture ctDNA Library CRCQV42Run044-18 from patient PBC0003376, plasma 12 month sample

  Dataset EGAD00001010668

• Targeted capture ctDNA Library CRCQV42Run046-20

  Targeted capture ctDNA Library CRCQV42Run046-20 from patient PBC0001176, plasma 3 month sample

  Dataset EGAD00001010711

• Targeted capture ctDNA Library CRCQV42Run045-12

  Targeted capture ctDNA Library CRCQV42Run045-12 from patient PBC0001068, plasma 3 month sample

  Dataset EGAD00001010683

• RNA-Seq of human stimulated and cultured CD4+ Treg cells

  This dataset includes whole transcriptome data of human stimulated and cultured CD4+ Treg cells (39 samples).

  Dataset EGAD00001005964

• Targeted capture ctDNA Library CRCQV42Run035-24

  Targeted capture ctDNA Library CRCQV42Run035-24 from patient PBC0004565, plasma 9 month sample

  Dataset EGAD00001010588

• Targeted capture ctDNA Library CRCQV42Run041-24

  Targeted capture ctDNA Library CRCQV42Run041-24 from patient PBC0005116, plasma 3 month sample

  Dataset EGAD00001010633

• Reference epigenome SMC07 mRNA-Seq data generated from KEP study

  SMC07 mRNA-Seq paired end data

  Dataset EGAD00001007174

• Exome sequencing of an AML treated with BCL2i

  Molecular profiling by exome sequencing of an AML case following treatment with a BCL2 inhibitor

  Dataset EGAD00001007307

• Deep sequencing for ctDNA determination

  Targeted deep sequencing for the KRAS p.Gly12Asp, p.Gly12Val and p.Ala146Thr mutations in plasma samples of CRC patients.

  Dataset EGAD00001006105

• scWGS primaries

  Single cell WGS (low pass) for primary samples

  Dataset EGAD00001006138

• Whole exome sequencing of Severe Insulin Resistant patients.

  Illumina paired-end sequencing of whole- exome pulldown DNA from Severe Insulin Resistant patients.

  Dataset EGAD00001000380

• Reference epigenome IPS01_N_Fibroblast_smRNA-Seq data generated from KEP study

  A IPS01_N_Fibroblast_smRNA-Seq single end data for iPSC(Oct4)

  Dataset EGAD00001003501

• HGS-3 - nanopore

  WGS Nanopore nanopore sequencing of organoid line HGS-3.1 and matching blood reference HGS-3

  Dataset EGAD00001005476

• Lund HPI data access committee for Inspire

  Phenotype data from human pancreatic islets from 191 donors, Lund University. Processed for the Inspire consortium.

  Dataset EGAD00001005523

• Reference epigenome SMC09 mRNA-Seq data generated from KEP study

  SMC09 mRNA-Seq paired end data

  Dataset EGAD00001007176

• Reference epigenome Pancreas-Islet07 WGBS data generated from KEP study

  Pancreas-Islet07 WGBS paired end data

  Dataset EGAD00001007146

• Targeted capture ctDNA Library CRCQV42Run035-19

  Targeted capture ctDNA Library CRCQV42Run035-19 from patient PBC0002853, plasma 9 month sample

  Dataset EGAD00001010584

• Reference epigenome Fat-adipocyte03 WGBS data generated from KEP study

  Fat-adipocyte03 WGBS paired end data

  Dataset EGAD00001007147

• Reference epigenome Fat-adipocyte04 WGBS data generated from KEP study

  Fat-adipocyte04 WGBS paired end data

  Dataset EGAD00001007148

• Prostate cancer datasets WES

  WES: 48 samples (5 blood samples from 6 patient data): 22 Tumour cores and 26 normal/benign cores (HiSeq)

  Dataset EGAD00001004467

• FGFP GWAS 16S sequencing (N=2259)

  16S sequencing data from 2259 Flemish Gut Flora Project (FGFP) samples

  Dataset EGAD00001006141

• Follicular T cell lymphoma

  Paired-end RNA-seq of follicular T cell lymphoma for the discovery of fusion transcripts

  Dataset EGAD00001006379

• Reference epigenome SMC05 mRNA-Seq data generated from KEP study

  SMC05 mRNA-Seq paired end data

  Dataset EGAD00001007173

• Reference epigenome SMC08 mRNA-Seq data generated from KEP study

  SMC08 mRNA-Seq paired end data

  Dataset EGAD00001007175

• Reference epigenome CKD24_C_Podo_WGBS data generated from KEP study

  A CKD24_C_Podo_WGBS paired end data for Podocytes(CD90(-) Podocalyxin(+), kidney)

  Dataset EGAD00001003469

• Reference epigenome CKD25_C_Podo_WGBS data generated from KEP study

  A CKD25_C_Podo_WGBS paired end data for Podocytes(CD90(-) Podocalyxin(+), kidney)

  Dataset EGAD00001003470

• Reference epigenome Fat-adipocyte05 WGBS data generated from KEP study

  Fat-adipocyte05 WGBS paired end data

  Dataset EGAD00001007149

• HipSci - Monogenic Diabetes - Exome Sequencing - July 2017

  HipSci - Monogenic Diabetes - Exome Sequencing - July 2017

  Dataset EGAD00001003516

• WGS files for Zhang GenomePaint paper

  WGS files for GenomePaint paper titled "Exploration of coding and non-coding variants in cancer using GenomePaint."

  Dataset EGAD00001006679

• Targeted capture ctDNA Library CRCQV42Run031-21

  Targeted capture ctDNA Library CRCQV42Run031-21 from patient PBC0001413, buffy coat sample

  Dataset EGAD00001010532

• Targeted capture ctDNA Library CRCQV42Run041-17

  Targeted capture ctDNA Library CRCQV42Run041-17 from patient PBC0002406, plasma 9 month sample

  Dataset EGAD00001010628

• Targeted capture ctDNA Library CRCQV42Run031-9

  Targeted capture ctDNA Library CRCQV42Run031-9 from patient PBC0001304, buffy coat sample

  Dataset EGAD00001010537

• Targeted capture ctDNA Library CRCQV42Run032-21

  Targeted capture ctDNA Library CRCQV42Run032-21 from patient PBC0001627, buffy coat sample

  Dataset EGAD00001010544

• Targeted capture ctDNA Library CRCQV42Run032-22

  Targeted capture ctDNA Library CRCQV42Run032-22 from patient PBC0001653, buffy coat sample

  Dataset EGAD00001010545

• Reference epigenome Islet-derived-iPSC04 WGBS data generated from KEP study

  Islet-derived_iPSC04 WGBS paired end data

  Dataset EGAD00001007877

• Targeted capture ctDNA Library CRCQV42Run041-12

  Targeted capture ctDNA Library CRCQV42Run041-12 from patient PBC0001413, plasma 3 month sample

  Dataset EGAD00001010626

• Targeted capture ctDNA Library CRCQV42Run044-20

  Targeted capture ctDNA Library CRCQV42Run044-20 from patient PBC0005209, plasma 6 month sample

  Dataset EGAD00001010670

• Targeted capture ctDNA Library CRCQV42Run044-22

  Targeted capture ctDNA Library CRCQV42Run044-22 from patient PBC0006040, plasma 6 month sample

  Dataset EGAD00001010672

• Targeted capture ctDNA Library CRCQV42Run046-10

  Targeted capture ctDNA Library CRCQV42Run046-10 from patient PBC0001552, plasma 12 month sample

  Dataset EGAD00001010701

• Targeted capture ctDNA Library CRCQV42Run045-5

  Targeted capture ctDNA Library CRCQV42Run045-5 from patient PBC0002851, plasma 6 month sample

  Dataset EGAD00001010697

• Targeted capture ctDNA Library CRCQV42Run046-11

  Targeted capture ctDNA Library CRCQV42Run046-11 from patient PBC0001284, plasma 6 month sample

  Dataset EGAD00001010702

• Targeted capture ctDNA Library CRCQV42Run046-12

  Targeted capture ctDNA Library CRCQV42Run046-12 from patient PBC0001135, plasma 6 month sample

  Dataset EGAD00001010703

• Targeted capture ctDNA Library CRCQV42Run046-19

  Targeted capture ctDNA Library CRCQV42Run046-19 from patient PBC0001527, plasma 9 month sample

  Dataset EGAD00001010710

• Targeted capture ctDNA Library CRCQV42Run046-16

  Targeted capture ctDNA Library CRCQV42Run046-16 from patient PBC0001042, plasma 3 month sample

  Dataset EGAD00001010707

• Targeted capture ctDNA Library CRCQV42Run42-6

  Targeted capture ctDNA Library CRCQV42Run42-6 from patient PBC0001224, plasma 9 month sample

  Dataset EGAD00001010830

• HipSci - Healthy Normals - Exome Sequencing - May 2014

  HipSci - Healthy Normals - Exome Sequencing - May 2014

  Dataset EGAD00001000893

• CSC DDR dataset

  CSC DDR dataset contains 4 bam files of two pairs of colorectal CSCs sensitive and resistant to ATR or CHK1 inhibitor

  Dataset EGAD00001006774

• Targeted capture ctDNA Library CRCQV42Run036-23

  Targeted capture ctDNA Library CRCQV42Run036-23 from patient PBC0002406, plasma 21 month sample

  Dataset EGAD00001010601

• WGS data of neuroblastoma patients

  30 samples of 15 individuals with neuroblastoma tumor, whole genome sequencing

  Dataset EGAD00001006956