23155 results for "ega"

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• RNASeq of Calcoco2 in beta and fat cell lines

  Investigation of the function of Calcoco2 by knocking it down in beta and fat cell lines.

  Study EGAS00001006127

• CMF_RNA_sequencing

  RNA sequencing will be undertaken to reconstruct rearrangements at level of transcription to determine pathogenomic genomic events in chondromyxoid fibroma

  Study EGAS00001000470

• Consanguineous_families_with_CHD_KAIMRC

  Exome sequencing of 184 samples from consanguineous families with different congenital heart defects collected at KAIMRC, Riyadh, Saudi Arabia.

  Study EGAS00001000544

• Exome sequencing of hyperplastic polyposis patients

  In this project we are sequencing the exomes of patients with hyperplastic polyposis, and tumours from these patients.

  Study EGAS00001000040

• Genentech study of gallbladder cancer

  Genomic characterization of gallbladder cancer using Exome-Seq, RNA-Seq and low pass whole genome sequencing.

  Study EGAS00001003004

• Impact of BRCA mutation type in non-tumorous breast tissue transcriptome

  To investigate the transcriptomic difference between BRCA1 vs. BRCA2 carriers, RNA sequencing was carried out.

  Study EGAS00001004890

• TSG_knock_out_in_hiPSCs

  We will perform RNAseq to evaluate the effects of the loss of a list of TSGs on the transcriptome.

  Study EGAS00001002262

• Functional dissection of inherited non-coding variation influencing multiple myeloma risk

  The project aimed at identification of genotype dependent chromatin accessibility in MM patients.

  Study EGAS00001005394

• RNAseq cutaneous and uveal melanoma liver metastases

  RNA sequencing analyses of tumor liver metastases from untreated cutaneous melanoma (CM) and uveal melanoma (UM) patients.

  Study EGAS00001004794

• CNV profile in HSP90 inhibitor resistant K562 cells

  Analysis of the acquired copy number profile in K562 cell which got resistant against HSP90 inhibitors.

  Study EGAS00001006385

• Longitudinal ctDNA in Uveal Melanoma

  Assess the efficacy of using multi-modal ctDNA analysis to detect relapse in patients with uveal melanoma

  Study EGAS00001006373

• Analyses of IACS-010759 treatment resistance on breast cancer bone metastases

  Identification of biological mecanisms involved in resistance of breast cancer bone metastases to IACS treatment.

  Study EGAS00001006429

• Characterizing the tumor immune microenvironment of ependymomas using targeted gene expression profiles and RNA-sequencing the pros and cons

  RNA sequencing data of a collection of 6 pediatric ependymoma cases

  Study EGAS00001006535

• 666PG SNVs

  SNV calls generated using SomaticSniper in VCF format from the CPCGene 666PG study

  Dataset EGAD00001006148

• WGS Study From Pediatrics

  This is a set of 20 10X Genomics Chromium WGS

  Dataset EGAD00001008011

• Single-cell TCR sequencing of gammadelta IELs in celiac disease

  Paired single-cell sequencing dataset of T-cell receptors from IELs, from both treated and untreated celiac patients and from controls. (Amplicon sequencing, paired-end fastq files).

  Dataset EGAD00001005362

• 10x Single Cell Gene Expression Library SCRNA10X_CS_CHIP0183_002A

  10x Single Cell Gene Expression library SCRNA10X_CS_CHIP0183_002A for Diffuse large B-cell lymphoma patient sample TFRI_Pair_9_DLBCL

  Dataset EGAD00001010232

• NICHE - RNA-seq of MMR proficient and MMR deficient early stage colon cancers

  The dataset includes 77 FASTQ files from single-end total RNA sequencing on Illumina HiSeq2500 for 39 patients.

  Dataset EGAD00001006042

• Melanoma C32 ENU resistance to Combination Therapy

  This study involves mutagenizing C32, a melanoma cell line, with ENU to identify those mutations which engender resistance to a targeted treatment.

  Dataset EGAD00001002234

• Whole genome sequencing in myasthenia gravis

  This dataset contains whole genome sequencing data on 25 individuals with myasthenia gravis. The data was generated using Illumina sequencing technology and is presented as BAM files for each sample.

  Dataset EGAD00001005262

• A96233A

  Whole genome sequencing for single cells for library A96233A 637 cells; filetype=bam

  Dataset EGAD00001007622

• The genotype of LAM disease

  Tumor biopsies from LAM disease were retrospectively analyzed by multiple techniques to characterize the alterations in patients ,to elucidate the landscape of genetic/genomic alterations.

  Dataset EGAD00001005363

• 666PG indels

  Indel calls generated using Pindel in VCF format from the CPCGene 666PG study

  Dataset EGAD00001006147

• Single cell transcriptome atlas of immune cells in human small intestine and in Celiac disease

  Single cell transcriptome atlas of immune cells in human small intestine and in Celiac disease

  Dataset EGAD00001005127

• MT sequencing reads from WGS of 10 Egyptian individuals

  This data set contains for 10 Egyptian individuals the WGS reads mapping to chrM. These were subsequently used for haplogroup assignment.

  Dataset EGAD00001006038

• Alveolar Rhabdomyosarcoma sequencing data

  This dataset comprises DNA sequencing for tumor and matched normal from an Alveolar Rhabdomyosarcoma patient. It also include RNA sequencing data from the tumor sample.

  Dataset EGAD00001006622

• Single cell targeted RNA sequencing

  Single cell hybrid-capture targeted sequencing of CD19 CAR T-cell infusion products used for standard of care treatment for relapsed/refractory large B-cell lymphoma.

  Dataset EGAD00001006327

• Intellance-2: TruSight Tumor 170 panel based DNA-seq

  Intellance-2: TruSight Tumor 170 panel based DNA-seq

  Dataset EGAD00001007945

• RNAseq analysis on metastatic Colorectal Cancer xenografts samples

  Bank of metastatic colorectal cancer (mCRC) of Patient Derived Xenografts (PDXs)

  Dataset EGAD00001009171

• Bulk exome sequencing of primary GBM - SF 10282

  We performed bulk exome-seq on a primary GBM and a blood sample from SF10282

  Dataset EGAD00001002275

• Macrophage response in term and preterm infants

  The data set comprises 48 samples from term and preterm infants. Expression profiles were generated using different stimuli (O2 3%, 21%, 65%; LPS stimulation).

  Dataset EGAD00001006885

• 1000IBD.eQTL.study.release.phenotype

  eQTL.study.release.phenotype

  Dataset EGAD00001006791

• A108735A

  Whole genome sequencing for single cells for library A108735A 714 cells; filetype=bam

  Dataset EGAD00001007593

• A98293B

  Whole genome sequencing for single cells for library A98293B 703 samples; filetype=bam

  Dataset EGAD00001008265

• Whole Exome Sequencing of Localized Prostate Cancer Patients

  Whole exome sequencing of localized prostate cancer patients in this study contained pair tumor-normal samples and validated tumor content.

  Dataset EGAD00001008274

• lowinput RNASEQ files for Mullighan BiTE RNASEQ2

  lowinput RNASEQ files for Mullighan BiTE RNASEQ2 paper titled "Tumor intrinsic and extrinsic mechanisms of response and resistance to blinatumomab in relapsed/refractory acute lymphoblastic leukemia"

  Dataset EGAD00001005732

• 10x Single Cell Gene Expression Library SCRNA10X_CS_CHIP0178_002A

  10x Single Cell Gene Expression library SCRNA10X_CS_CHIP0178_002A for Diffuse large B-cell lymphoma patient sample TFRIPAIR8_DLBCL

  Dataset EGAD00001010231

• CD8+ T-cell exhaustion induced by leukemic cells drives progression in Chronic Lymphocytic Leukemia

  Exome sequencing data from patient with Chronic Lymphocytic Leukemia. DNA was extracted from sorted B-CLL and T cells or granulocytes.

  Dataset EGAD00001005748

• MTM-HD - skeletal muscle RNAseq

  MTM-HD - skeletal muscle RNAseq. 57 samples from controls, pre-HD and early-HD patients.

  Dataset EGAD00001009106

• Effects of psoriasis and psoralen exposure on the somatic mutation landscape of the skin

  Data from sequencing of microbiopsies of keratinocytes isolated via laser capture microscopy from lesional and non-lesonal skin biopsies from psoriasis patients.

  Dataset EGAD00001011265

• A98176B

  Whole genome sequencing for single cells for library A98176B 1389 samples; filetype=bam

  Dataset EGAD00001008261

• A96178A

  Whole genome sequencing for single cells for library A96178A 788 cells; filetype=bam

  Dataset EGAD00001007115

• RNA Sequencing of paediatric patients with B lymphoblastic leukemia

  RNA sequencing was performed on 54 bone marrow samples at diagnosis of paediatric patients with B lymphoblastic leukemia.

  Dataset EGAD00001005103

• WES for Patient 1 to 8 of NIBIT-M4 clinical trial

  WES for Patient 1 to 8 of NIBIT-M4 clinical trial

  Dataset EGAD00001009701

• RNA-Seq data of de novo assembly individual EGYPT

  This is the blood RNA-Seq read data used for expression analysis such as haplotypic expression (mapped against GRCh38).

  Dataset EGAD00001006036

• Genome and transcriptome sequence data from a NUT midline carcinoma tumor patient

  Genome and transcriptome sequence data from a NUT midline carcinoma patient, generated as part of the BC Cancer Agency's Pediatric Personalized Onco-Genomics study

  Dataset EGAD00001015289

• Genome and transcriptome sequence data from a minimally invasive adenocarcinoma tumor patient

  Genome and transcriptome sequence data from a minimally invasive adenocarcinoma patient, generated as part of the BC Cancer Agency's Pediatric Personalized Onco-Genomics study

  Dataset EGAD00001015297

• Total RNA sequencing in M1911

  The dataset comprises total RNA sequencing data obtained from two samples of testicular tissue from the individual M1911, who was diagnosed with meiotic arrest.

  Dataset EGAD00001008639

• Additional RNASeq files for Roussel MBPRP

  Additional RNASeq files for Roussel paper titled "Combination of CDK4/6 with BET-bromodomain and PI3K/mTOR inhibitors in medulloblastoma in vitro and in vivo"

  Dataset EGAD00001009394

• Esophageal Adenocarcinoma Organoid scRNAseq data

  This is 10X single cell RNA-seq data of esophageal adenocarcinoma organoids.

  Dataset EGAD00001007525