23164 results for "ega"

in 29.70 milliseconds.

• Molecular mechanism of Vd2 T cells upon mevalonate metabolism inhibition

  Raw molecular data of Vd2 T cells upon treatment with different stimuli and mevalonate pathway inhibitors.

  Dataset EGAD00001011322

• Effects of busulfan, fludarabine and clofarabine treatment on human small intestinal organoids.

  Instestinal organoids treated with either busulfan, fludarabine or clofarabine for 24h

  Dataset EGAD00001011336

• Single-cell RNA and TCR sequencing of 40 advanced HCC biopsies.

  Single-cell RNA and TCR sequencing of 40 advanced HCC pre-treatment biopsies from 38 patients.

  Dataset EGAD00001011347

• scRNA-seq dataset of A cycling, progenitor-like cell population at the root of atypical teratoid rhabdoid tumor subtype differentiation trajectories

  Study describing the differentiation trajectory...

  Dataset EGAD00001015545

• Geographic and age-related variations in mutational processes in colorectal cancer - copy number variants (Mutographs)

  Geographic and age-related variations in mutational processes in colorectal cancer - copy number variants (Mutographs)

  Dataset EGAD00001015487

• Gastric Cancer Organoid Cultures and Tumors RNASeq Data

  RNASeq data generated from organoid cultures established from gastric cancers and normal mucosae, paired tumor frozen tissues, and cultured fibroblast.

  Dataset EGAD00001004302

• Whole Exome Sequencing of gliomas

  15 whole exome sequencing datasets from five patients. Data is provided as bam files. Libraries were generated using the SeqCap EZ Exome v3.0 kit and sequenced on an Illumina sequencer

  Dataset EGAD00001003763

• WGS and RNA-Seq data from a GBM patient PT-FB6711

  WGS and RNA-Seq data from a GBM patient PT-FB6711

  Dataset EGAD00001004235

• Illumina_WXS_MET-CELL-XEN

  Whole-exome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from PDO culture derived from colorectal cancer metastasis sample

  Dataset EGAD00001002097

• WGS seq data (56 tumor/control pairs) for study EGAS00001001394

  Part of WGS seq data of Maligant Lymphoma study (ICGC)

  Dataset EGAD00001001673

• GEL WGS Comparison

  These samples are to be analysed with the CGP Developed cancer panel and the results will be compared with WGS data from 4 different comercial providers.

  Dataset EGAD00001000872

• Sequencing data for Murtaza et al. Nature Communications 2015 (doi:10.1038/ncomms9760)

  Exome and targeted amplicon sequencing data for tumor, germline and plasma samples from a patient with metastatic breast cancer.

  Dataset EGAD00001002108

• Saliva microbiota in Finnish children

  The saliva microbiota of 972 Finnish children, aged 9-14 years was characterized using the 16S rRNA (V3-V4) gene sequencing with Illumina Hiseq platform.

  Dataset EGAD00001004145

• Illumina_WGS_T-XEN-CELL

  Whole-genome sequencing on Illumina HiSeq2000/2500 of PDO culture derived from Patient-derived xenograft derived from colorectal cancer primary tumor sample

  Dataset EGAD00001002092

• IVF MeDIP-seq bam files

  Bam files consisting of aligned MeDIP-seq reads from cord blood cells and cord blood mononuclear cells of twins conceived through in vitro fertilisation

  Dataset EGAD00001003158

• Melanoma C32 ENU Resistance to Single Agent Therapy

  This study involves mutagenizing C32, a melanoma cell line, with ENU to identify those mutations which engender resistance to a targeted treatment.

  Dataset EGAD00001003239

• Whole Exome Sequencing files accompanying Genetic landscape of pediatric Rhabdomyosarcoma

  Whole Exome Sequencing files accompanying Genetic landscape of pediatric Rhabdomyosarcoma

  Dataset EGAD00001001059

• Illumina_RNA_T-CELL-XEN

  RNAseq on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from PDO culture derived from colorectal cancer primary tumor sample

  Dataset EGAD00001002079

• Bam files for the whole exome sequencing from the study on Spatial homogeneity in pediatric brain tumors.

  Bam files for the whole exome sequencing from the study on Spatial homogeneity in pediatric brain tumors.

  Dataset EGAD00001001055

• Illumina_WGS_MET-CELL-XEN

  Whole-genome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from PDO culture derived from colorectal cancer metastasis sample

  Dataset EGAD00001002086

• WGS and RNA-Seq data from a GBM patient PT-SO0258

  WGS and RNA-Seq data from a GBM patient PT-SO0258

  Dataset EGAD00001004261

• Severe acne GWAS meta-analysis

  Summary statistics of a GWAS meta-analysis for severe acne. A total of 7,441,713 genotyped and imputed variants were used for 5,602 European severe acne cases and 21,120 matched population controls.

  Dataset EGAD00001004419

• HBV-associated hepatocellular carcinoma

  Fastq files of whole-genome bisulfite sequence of tumor tissue of HBV-associated hepatocellular carcinoma

  Dataset EGAD00001004033

• Plasma-Seq follow-up CSPC4

  We performed serial plasma-Seq analyses on a male who progressed from castration-sensitive to castration-resistant prostate cancer within 10 months following treatment with androgen-deprivation therapy.

  Dataset EGAD00001000396

• early onset lone atrial fibrillation case-control study

  Target sequencing W/ TruSight Cardio Sequencing Kit. 395 early onset lone AF cases and 375 controls. Sequencing was performed on Illumina NextSeq and HiSeq 2500 systems.

  Dataset EGAD00001004330

• NKI-AvL CRC-OVC scTCR RNA-seq

  The dataset “NKI-AvL CRC-OVC scTCR RNA-seq" includes 368 BAM files from paired-end RNA sequencing on Illumina MiSeq for 2 colorectal cancer and 2 ovarian cancer patients.

  Dataset EGAD00001004342

• Gastric Cancer Organoid Cultures and Tumors Whole Exome Sequencing Data

  Whole exome sequencing data generated from organoid cultures established from gastric cancers, paired gastric tumor frozen tissues and blood leukocyte DNA.

  Dataset EGAD00001004301

• Illumina_RNA_T-XEN-CELL

  RNAseq on Illumina HiSeq2000/2500 of PDO culture derived from Patient-derived xenograft derived from colorectal cancer primary tumor sample

  Dataset EGAD00001002081

• Microbial infections in Alzheimer’s patients

  In the present study, we have examined fungal and bacterial infection in brain tissue from 10 AD patients and 16 control subjects by next-generation sequencing NGS using MiSeq sequencing platform (Illumina).

  Dataset EGAD00001003886

• Mammary cell samples from donors 28/32/33

  Mammary cell samples from donors 28/32/33. Contains 12 MiSeq sequencefiles and 12 alignment files derived from HiSeq runs.

  Dataset EGAD00001001439

• WGS and RNA-Seq data from a GBM patient PT-BM772

  WGS and RNA-Seq data from a GBM patient PT-BM772

  Dataset EGAD00001004229

• Divergent clonal selection dominates medulloblastoma at recurrence

  Divergent clonal selection dominates medulloblastoma at recurrence

  Dataset EGAD00001000946

• Exome sequencing data for LMS tumor and control samples

  The data set contains paired end fastq files for whole exome sequencing data for Leiomyosarcoma tumor and control samples

  Dataset EGAD00001003829

• Whole-exome sequencing of retinoblastoma tumor-blood pairs

  Paired-end whole exome sequenncing (Illumina) of primary enucleated retinoblastoma and matching lymphocyte DNA was performed to find somatic alterations that are related to oncogenesis.

  Dataset EGAD00001001909

• RNA-Seq for PTPN1 project (EGAS00001000554)

  Fastq files corresponding to RNA-Seq dataset for PTPN1 project (EGAS00001000554)

  Dataset EGAD00001001646

• Illumina_WGS_T-CELL-XEN

  Whole-genome sequencing on Illumina HiSeq2000/2500 of Patient-derived xenograft derived from PDO culture derived from colorectal cancer primary tumor sample

  Dataset EGAD00001002090

• H005 WES CLL

  Whole exome sequencing from matched tumor-control samples of 121 primary lymphoma samples. Sequencing was performed on Illumina HiSeq2000. The dataset contains FASTQ files.

  Dataset EGAD00001002055

• Human Epidermis scRNA

  Single cell RNA-seq analysis of human skin.

  Dataset EGAD00001004367

• Methylation of Ewing sarcoma tumors - RRBS (ICGC)

  RRBS data of 86 Ewing patients (French). Illumina HiSeq 2000/2500 (Fastq files available). Sheffield et al. Nat Med. 2017 Jan 30

  Dataset EGAD00001003133

• RNASeq on HiSeq platform of 29 pancreatic neuroendocrine cases

  BAM outputs from RSEM (https://deweylab.github.io/RSEM/) analysis of RNASeq sequencing on HiSeq platform of tumour samples from 29 pancreatic neuroendocrine cases.

  Dataset EGAD00001003336

• Transcriptome profiling of 25 prostate tumor samples by RNA-Seq

  Transcriptome profiling of 25 prostate tumor samples by RNA-Seq

  Dataset EGAD00001003344

• RRBS sequencing of 7 tumour regions and a normal sample from a single TRACERx patient.

  RRBS sequencing of 7 tumour regions and a normal sample from a single TRACERx patient.

  Dataset EGAD00001003404

• ChIP-Seq data for the paper titled "Orthotopic Patient-Derived Xenografts of Pediatric Solid Tumors"

  ChIP-Seq data for the paper titled "Orthotopic Patient-Derived Xenografts of Pediatric Solid Tumors"

  Dataset EGAD00001003432

• RNA sequencing of human ILC3 from lymphoid organs and blood

  Rna sequencing of purified human group 3 innate lymphoid cells from non-reactive lymph nodes and spleen, inflamed tonsils and peripheral blood.

  Dataset EGAD00001003704

• Spatial Maps of Prostate Cancer Transcriptomes

  A total of 14 samples that has been analyzed with the Spatial Transcriptomics method. H&E stain can be sent if requested.

  Dataset EGAD00001004121

• WGS and RNA-Seq data from a GBM patient PT-RL5404

  WGS and RNA-Seq data from a GBM patient PT-RL5404

  Dataset EGAD00001004257

• WGS files for double minute brain tumor paper.

  Whole Genome Sequencing files accompanying the paper titled "Structure and evolution of double minutes in diagnosis and relapse brain tumors". Please read the paper for more details.

  Dataset EGAD00001004337

• Genetic factors underlying premature coronary heart disease in patients with normal coronary arteries

  The study will analyse by exome sequencing 42 Greek patients with premature MI and no vessel disease to identify genetic factors underlying this condition.

  Dataset EGAD00001000402

• Whole genome sequencing of untreated and castration resistant prostate cancers

  Low coverage whole genome sequencing of 27 untreated prostate cancers, 9 castration resistant prostate cancers, and 4 benign prostatic hyperplasias.

  Dataset EGAD00001000612

• Copy number profiling using PlasmaSeq

  In order to establish copy number profiles from the various samples we prepared libraries and subjected them to whole-genome sequencing at a shallow sequencing depth (0.1x)

  Dataset EGAD00001000761