23083 results for "ega"

in 248.71 milliseconds.

• scWGS PDX

  Single cell WGS (low pass) for PT1-derived PDX samples

  Dataset EGAD00001006137

• Targeted capture ctDNA Library CRCQV42Run029-5

  Targeted capture ctDNA Library CRCQV42Run029-5 from patient PBC0002533, TNBC FFPE sample

  Dataset EGAD00001010518

• Dataset for B-ALL scRNA-seq

  10x Genomics 5' library scRNA-seq data for 85 B-ALL patients with different subtypes

  Dataset EGAD00001011327

• RNAseq sample

  RNAseq sample used in study titled "Immune-awakening revealed by peripheral T cell dynamics after one cycle of immunotherapy".

  Dataset EGAD00001005747

• CP-NET Cram files

  WGS Cram files from the Childhood Cerebral Palsy Integrated Neuroscience Discovery Network "CP-NET" - Clinical Database Platforms - Phase 3 project.

  Dataset EGAD00001010014

• EV WGS

  WGS

  Dataset EGAD00001008973

• Reference epigenome Fat-adipocyte04 mRNA-Seq data generated from KEP study

  Fat-adipocyte04 mRNA-Seq paired end data

  Dataset EGAD00001007158

• WGS data from a GBM patient PT-MS8478

  WGS data from a GBM patient PT-MS8478

  Dataset EGAD00001008524

• Dataset of whole-exome sequencing of acute erythroid leukemia

  This dataset includes 48 bam files, including those of 24 tumors and 24 paired normal samples.

  Dataset EGAD00001005074

• scRNA primaries

  Single cell RNA-seq for primary samples

  Dataset EGAD00001006135

• Reference epigenome Pancreas-Islet08 mRNA-Seq data generated from KEP study

  Pancreas-Islet08 mRNA-Seq paired end data

  Dataset EGAD00001007168

• Reference epigenome Islet-derived-iPSC01 WGBS data generated from KEP study

  Islet-derived-iPSC01 WGBS paired end data

  Dataset EGAD00001007144

• Reference epigenome Islet-derived-iPSC02 WGBS data generated from KEP study

  Islet-derived-iPSC02 WGBS paired end data

  Dataset EGAD00001007145

• Reference epigenome Fat-adipocyte03 mRNA-Seq data generated from KEP study

  Fat-adipocyte03 mRNA-Seq paired end data

  Dataset EGAD00001007157

• Reference epigenome Fat-adipocyte05 mRNA-Seq data generated from KEP study

  Fat-adipocyte05 mRNA-Seq paired end data

  Dataset EGAD00001007159

• Reference epigenome Islet-derived-MSC04 WGBS data generated from KEP study

  Islet-derived-MSC04 WGBS paired end data

  Dataset EGAD00001007143

• WGBS data for Glioblastoma (EGAS00001003953, H016)

  Whole Genome Bisulfite data for human glioblastoma patients, EGAS00001003953. 68 human samples

  Dataset EGAD00001006546

• Cord blood sequencing data

  SmMIP libraries using cord blood DNA were generated in replicates and were sequenced on the NovaSeq SP platform (Illumina)

  Dataset EGAD00001007789

• Targeted capture ctDNA Library CRCQV42Run025-8

  Targeted capture ctDNA Library CRCQV42Run025-8 from patient PBC0003385, TNBC FFPE sample

  Dataset EGAD00001010486

• Targeted capture ctDNA Library CRCQV42Run026-17

  Targeted capture ctDNA Library CRCQV42Run026-17 from patient PBC0003643, TNBC FFPE sample

  Dataset EGAD00001010490

• A98269B

  Whole genome sequencing for single cells for library A98269B 1609 cells; filetype=bam

  Dataset EGAD00001006947

• Reference epigenome Islet-derived_MSC06 mRNA-Seq data generated from KEP study

  Islet-derived_MSC06 mRNA-Seq paired end data

  Dataset EGAD00001007878

• A96217B

  Whole genome sequencing for single cells for library A96217B 1616 cells; filetype=bam

  Dataset EGAD00001006945

• sWGS of non-cancer controls

  Paired end shallow whole genome sequencing (sWGS) data of cell-free DNA from plasma from self-reporting healthy individuals (MonRec Cohort)

  Dataset EGAD00001005805

• Reference epigenome Islet-derived-MSC01 WGBS data generated from KEP study

  Islet-derived-MSC01 WGBS paired end data

  Dataset EGAD00001007140

• CTCF-ChIP-Seq of cohesin-mutated and wildtype adult AMLs

  ChIP-Seq targeting CTCF in cohesin-mutated (STAG2 or RAD21 mutations) and wildtype adult AMLs (CTRL-AMLs).

  Dataset EGAD00001011200

• Targeted capture ctDNA Library CRCQV42Run022-7

  Targeted capture ctDNA Library CRCQV42Run022-7 from patient PBC0002744, TNBC FFPE sample

  Dataset EGAD00001010458

• He et al. WGS data

  This dataset are the bam files of WGS data from the paper by He et al.

  Dataset EGAD00001007133

• Reference epigenome SMC05 h3k9me3 ChIP-Seq data generated from KEP study

  SMC05 h3k9me3 ChIP-Seq paired end data

  Dataset EGAD00001007336

• Whole-genome sequencing of Tibetans from China

  Twenty-seven Tibetan samples from China were whole-genome sequenced to investigate high-altitude adaptation, population genetics and demographic history.

  Dataset EGAD00001004797

• UCL Lung PCA - Whole exome multiregion sequencing data from human preinvasive airway biopsies

  UCL Lung PCA - Whole exome multiregion sequencing data from human preinvasive airway biopsies

  Dataset EGAD00001015539

• Reference epigenome Islet-derived-MSC02 WGBS data generated from KEP study

  Islet-derived-MSC02 WGBS paired end data

  Dataset EGAD00001007141

• Single-cell RNA-seq cases

  Single-cell RNA-seq cases (Tumor and adjacent tissue)

  Dataset EGAD00001008835

• Fecal 16S HV metadata

  Metadata for fecal 16S-V4 rRNA gene sequence data from NCT02749630 healthy volunteers.

  Dataset EGAD00001008821

• WGS data from a GBM patient PT-SB3465

  WGS data from a GBM patient PT-SB3465

  Dataset EGAD00001008528

• Uncovering tumor intrinsic and extrinsic factors that regulate hepatocellular carcinoma growth using patient derived xenograft assays

  Exome Sequencing and RNA Sequencing Data for PDX Samples

  Dataset EGAD00001005734

• Reference epigenome Pancreas-Islet07 mRNA-Seq data generated from KEP study

  Pancreas-Islet07 mRNA-Seq paired end data

  Dataset EGAD00001007167

• Targeted capture ctDNA Library CRCQV42Run026-14

  Targeted capture ctDNA Library CRCQV42Run026-14 from patient PBC0003587, TNBC FFPE sample

  Dataset EGAD00001010487

• Targeted capture ctDNA Library CRCQV42Run029-11

  Targeted capture ctDNA Library CRCQV42Run029-11 from patient PBC0001353, TNBC FFPE sample

  Dataset EGAD00001010511

• Finnish - THL Health2000 Dataset

  The dataset encompasses 208 Runs from the WGSPD Project 3 - Genomic Strategies to Identify High-impact Psychiatric Risk Variants Project

  Dataset EGAD00001008684

• Targeted capture ctDNA Library CRCQV42Run026-15

  Targeted capture ctDNA Library CRCQV42Run026-15 from patient PBC0002872, TNBC FFPE sample

  Dataset EGAD00001010488

• Reference epigenome Pancreas-Islet06 mRNA-Seq data generated from KEP study

  Pancreas-Islet06 mRNA-Seq paired end data

  Dataset EGAD00001007166

• Reference epigenome SMC01 h3k4me3 ChIP-Seq data generated from KEP study

  SMC01 h3k4me3 ChIP-Seq paired end data

  Dataset EGAD00001007311

• WGS files for paper titled "Preclinical Pediatric Molecular Analysis for Therapy Choice (MATCH)"

  WGS files for paper titled "Preclinical Pediatric Molecular Analysis for Therapy Choice (MATCH)"

  Dataset EGAD00001015697

• RBWES

  Retinoblastoma is a rare childhood cancer of the retina. We studied retinoblastoma by Whole-Exome-Sequencing.

  Dataset EGAD00001007591

• PRDM13 exome sequencing set

  Exome sequencing study on 4 individuals from a pedigree with CHH and cerebellar hypoplasia.

  Dataset EGAD00001008420

• Treatment arm information and sample sheet

  Table of treatment arm information for the 418 RNAseq evaluable population.

  Dataset EGAD00001009502

• CPC-GENE H3K27ac ChIP-seq

  CPC-GENE H3K27ac ChIP-seq data comprises 48 tumour samples and 6 benign samples sequenced with single end Illumina HiSeq 2000.

  Dataset EGAD00001010296

• Reference epigenome OB56_N_PreA_smRNA-Seq data generated from KEP study

  A OB56_N_PreA_smRNA-Seq single end data for Preadipocytes(fat)

  Dataset EGAD00001003495

• UK10K_RARE_CHD REL-2013-04-20

  UK10K_RARE_CHD REL-2013-04-20

  Dataset EGAD00001000413

• UK10K_RARE_THYROID REL-2013-04-20

  UK10K_RARE_THYROID REL-2013-04-20

  Dataset EGAD00001000420

• Whole genome sequence of condrosarcoma

  Fastq files of 10 samples of condrosarcoma

  Dataset EGAD00001000873

• Swedish schizophrenia control individuals

  Genomic DNA from Swedish control individuals was pooled. Then the genomic sequence of brain expressed miRNA genes was determined in the pools.

  Dataset EGAD00001001850

• Reference epigenome IPS02_N_NPC_WGBS data generated from KEP study

  A IPS02_N_NPC_WGBS paired end data for Neural progenitor cells(Nestin)

  Dataset EGAD00001003474

• Reference epigenome IPS03_N_ENeuron_WGBS data generated from KEP study

  A IPS03_N_ENeuron_WGBS paired end data for Early neuron cells(Tuj1)

  Dataset EGAD00001003475

• Reference epigenome OB57_D_PreA_mRNA-Seq data generated from KEP study

  A OB57_D_PreA_mRNA-Seq paired end data for Preadipocyte(fat)

  Dataset EGAD00001003487

• Reference epigenome CKD25_C_Podo_smRNA-Seq data generated from KEP study

  A CKD25_C_Podo_smRNA-Seq single end data for Podocytes(CD90(-) Podocalyxin(+), kidney)

  Dataset EGAD00001003499

• HipSci - Bardet-Biedl Syndrome - RNA Sequencing - October 2016

  HipSci - Bardet-Biedl Syndrome - RNA Sequencing - October 2016

  Dataset EGAD00001003181

• Reference epigenome CKD25_C_Podo_mRNA-Seq data generated from KEP study

  A CKD25_C_Podo_mRNA-Seq paired end data for Podocytes(CD90(-) Podocalyxin(+), kidney)

  Dataset EGAD00001003483

• HipSci - Bardet-Biedl Syndrome - Exome Sequencing - July 2017

  HipSci - Bardet-Biedl Syndrome - Exome Sequencing - July 2017

  Dataset EGAD00001003515

• RNA sequencing data to study "A biobank of patient-derived pediatric braintumor models"

  RNA sequencing data for the PDOX model EPD-613FH

  Dataset EGAD00001003573

• Liquid Biopsy by NGS show differences in CRC stage

  Exome sequencing from cfDNA blood samples. 30 sets of 2x76 Illumina reads in Fastq format.

  Dataset EGAD00001004307

• ChIP-Seq files for PCGP ATRX study

  ChIP-Seq files for PCGP ATRX study paper titled "MYCN Amplification and ATRX Mutations are Incompatible in Neuroblastoma"

  Dataset EGAD00001004429

• Pancreatic organoid - case samples

  This dataset contains 31 pancreatic organoid samples used in the 'organoid data of pancreatic cancers ' study

  Dataset EGAD00001004528

• HIPO blastemal Wilms (nephroblastoma) RNA sequencing samples

  HIPO blastemal Wilms (nephroblastoma) characterisation of tumor driving gene expression events

  Dataset EGAD00001000993

• Targeted deep sequencing of somatic mutations

  We used targeted deep sequencing to accurately establish the allele frequencies of the mutations identified by exome sequencing

  Dataset EGAD00001000763

• SFHS pedigrees

  Deep (>25x mean coverage) whole genome sequencing on 5-10 families drawn from the Scottish Family Health Study with four or more children.

  Dataset EGAD00001001214

• McGill EMC Release 4 in tissue "Brodmann (1909) area 44"

  McGill EMC Release 4 in tissue "Brodmann (1909) area 44"

  Dataset EGAD00001001285

• HipSci - Healthy Normals - Exome Sequencing - April 2015

  HipSci - Healthy Normals - Exome Sequencing - April 2015

  Dataset EGAD00001001437

• Reference epigenome CKD24_C_Podo_mRNA-Seq data generated from KEP study

  A CKD24_C_Podo_mRNA-Seq paired end data for Podocytes(CD90(-) Podocalyxin(+), kidney)

  Dataset EGAD00001003482

• Genentech gastric tumor sequencing

  Exome-seq, RNA-Seq, SNP array profiling of gastric tumor samples.

  Dataset EGAD00001000815

• Illumina HiSeq 2000

  Three files of patients 20, 23 and 25 with WGS done on Illumina HiSeq 2000. For research purpose and authorised user only.

  Dataset EGAD00001003438

• PACA-CA RNASeq fastq files

  Fastq files for PACA-CA RNA Seq analysis, for DCC release 27

  Dataset EGAD00001003972

• STREP GENE Study Genome-wide Genotyping by Illumina Array

  Genotyping of 43 cases of invasive GAS infection by Illumina HumanCore-24 array and Illumina Global Screening Array.

  Dataset EGAD00001004558

• raw fastq file from 10x genomics sequencing

  RNA samples of bone marrow and cord blood were sequenced by 10x genomics platform.

  Dataset EGAD00001004200

• Reference epigenome OB57_D_PreA_smRNA-Seq data generated from KEP study

  A OB57_D_PreA_smRNA-Seq single end data for Preadipocyte(fat)

  Dataset EGAD00001003496

• HipSci - Bardet-Biedl Syndrome - RNA Sequencing - July 2017

  HipSci - Bardet-Biedl Syndrome - RNA Sequencing - July 2017

  Dataset EGAD00001003531

• McGill EMC Release 4 in tissue "Brodmann (1909) area 11"

  McGill EMC Release 4 in tissue "Brodmann (1909) area 11"

  Dataset EGAD00001001284

• RNA-Seq Pair End

  RNA analysis of two patients 11 and 15 with WGS done on Illumina HiSeq2000. For research purpose and authorised user only.

  Dataset EGAD00001003429

• Reference epigenome CKD24_C_Podo_smRNA-Seq data generated from KEP study

  A CKD24_C_Podo_smRNA-Seq single end data for Podocytes(CD90(-) Podocalyxin(+), kidney)

  Dataset EGAD00001003498

• HipSci - Bardet-Biedl Syndrome - Exome Sequencing - October 2016

  HipSci - Bardet-Biedl Syndrome - Exome Sequencing - October 2016

  Dataset EGAD00001003161

• Cancer-associated genome-wide hypomethylation and copy number aberrations

  Noninvasive detection of cancer-associated genome-wide hypomethylation and copy number aberrations by plasma DNA bisulfite sequencing

  Dataset EGAD00001001093

• Osteosarcoma RNAseq

  We propose to definitively characterise the somatic genetics of Osteosarcoma cancer through generation of comprehensive catalogues of somatic mutations by high coverage genome and transcriptome sequencing.

  Dataset EGAD00001000826

• V2 Colorectal panel test

  Targeted gene screen of cell line tumour samples for testing the new V2 Colorectal gene panel.

  Dataset EGAD00001003253

• Amplicon sequencing data from organoids of colorectal cancer patients.

  The dataset includes 13 bam files. Each bam file is a different colorectal cancer patient organoid.

  Dataset EGAD00001004313

• ATAC-seq for placental and buffycoat cells.

  We performed ATAC-seq experiments using 2 placental samples and 2 buffycoat samples.

  Dataset EGAD00001004291

• ChIP-Seq files for RMS.

  ChIP-Seq files accompanying the paper titled "Identification of Therapeutic Targets in Rhabdomyosarcoma Through Integrated Genomic, Epigenomic, and Proteomic Analyses".

  Dataset EGAD00001004312

• Pilocytic Astrocytoma ICGC PedBrain whole genome sequencing

  Pilocytic Astrocytoma ICGC PedBrain whole genome sequencing

  Dataset EGAD00001000616

• SeqControl

  SeqControl

  Dataset EGAD00001001115

• Belgian epilepsy control individuals

  Genomic DNA from Belgian control individuals was pooled. Then the genomic sequence of brain expressed miRNA genes was determined in the pools.

  Dataset EGAD00001001852

• HipSci - Healthy Normals - Exome Sequencing - January 2016

  HipSci - Healthy Normals - Exome Sequencing - January 2016

  Dataset EGAD00001001932

• NSCCG CRC WES

  1006 Familial early onset gemrline CRC patients sequenced by the Molecular and Population Genetics group of the Institute of Cancer Research

  Dataset EGAD00001002204

• BAP1 sequence of uveal melanoma and mesothelioma samples

  Detection of BAP1 mutations in DNA from uveal melanoma and mesothelioma samples.

  Dataset EGAD00001002229

• SFHS pedigrees_X10

  Deep (>25x mean coverage) whole genome sequencing on 5-10 families drawn from the Scottish Family Health Study with four or more children.

  Dataset EGAD00001003211

• Targeted capture ctDNA Library CRCQV42Run024-11

  Targeted capture ctDNA Library CRCQV42Run024-11 from patient PBC0001306, TNBC FFPE sample

  Dataset EGAD00001010465

• Targeted capture ctDNA Library CRCQV42Run025-6

  Targeted capture ctDNA Library CRCQV42Run025-6 from patient PBC0003014, TNBC FFPE sample

  Dataset EGAD00001010484

• TenK10K project

  This DAC handles access to data from the TenK10K project, which is comprised of matched whole-genome sequencing (WGS) and single-cell RNA-sequencing (scRNA-seq) datasets.

  Dac EGAC50000000931

• Cryptic translocations in double hit signature DLBCL genomes

  18 DLBCL genomes

  Dataset EGAD00001006087

• WES of pcALCL

  Whole-exome sequencing of matched frozen tumor biopsies/granulocytes from patients with primary cutaneous anaplastic large cell lymphoma. 7 paired tumor/germline samples. BGISEQ-500.

  Dataset EGAD00001006177

• Res1_PC9_exp2_MC_01.04.22

  8 cell pellet samples for genomic DNA extraction. CRISPR PCR1 and PCR2 indexing - Please use standard Kosuke primers.

  Dataset EGAD00001012233