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Metadata Public API
Documentation
discovery/metadata/public-metadata-api
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R code
Dataset
EGAD00001007652
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ML modeling data & code
Dataset
EGAD00001009764
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HELIUS DAC
The HELIUS data are owned by the Amsterdam University Medical Centers, location AMC in Amsterdam, The Netherlands. To allow sharing of microbiome data collected in HELIUS with (inter)national researchers, 16s rRNA sequence analysis has been stored at the European genome-phenome archive (EGA; accession code EGAD00001004106). This requires that access needs to be granted, also because the HELIUS data are stored with relevant phenotypical variables. Access is granted to all researchers affiliated with an internationally recognized research institution who request to use the HELIUS data within the EGA context, after having signed the data transfer agreement. Any researcher can request the data by submitting a proposal to the HELIUS Executive Board as outlined at http://www.heliusstudy.nl/en/researchers/collaboration, by email: heliuscoordinator at amsterdamumc dot nl. The HELIUS Executive Board will check proposals if they do not conflict with ethical approvals and informed consent forms of the HELIUS study.
Dac
EGAC00001000895
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R code
Dataset
EGAD00001007654
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HELIUS cohort
Study
EGAS00001002969
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Variables of diversity, clonality, V and J usage and main COVID-19-reactive GLIPH2 frequencies.
Study
EGAS50000000587
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Skin Adenocarcinoma Genome Sequencing
Dataset
EGAD00001001100
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HELIUS cohort gut microbiome batch2
Dataset
EGAD00001009732
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HELIUS cohort gut microbiome
Dataset
EGAD00001004106
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Next-generation sequencing raw data from metastatic prostate cancer biopsies - observational study Vall d'Hebron Institute of Oncology (Ethics committee code PR-AG-5248)
Dac
EGAC50000000448
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A unidirectional histone code in bidirectional promoters across cell types
Study
EGAS00001001656
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Million Veteran Program (MVP) Summary Results from Non-Sensitive Omics Studies
Study
phs002453
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Human four week embryo head as reference for generating an enhancer compendium for neuronal and neural crest development using neural tube organoids.
Study
EGAS50000001031
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An atlas of the developing human fetal spine
Dataset
EGAD00001009801
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Butyricicoccus study accession
Dac
EGAC00001001046
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Data Access Committee for EGA study accession EGAS00001006831
Dac
EGAC00001002988
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VIB Flemish Gut Flora Project Accession Committee
Dac
EGAC00001000430
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DAC to control data accession to the Myeloproliferative Neoplasm transcriptome study
Dac
EGAC00001001134
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Methylation profiles in patients with blastic plasmacytoid dendritic cell neoplasm
Study
EGAS00001007201
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Bibliography Statistics
Documentation
about/statistics/bibliography
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Cohort A spatial transcriptomics sequencing
Study
EGAS50000000954
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Cohort B spatial transcriptomics sequencing
Study
EGAS50000000956
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Development and Validation of a Prognostic and Predictive 32-Gene Signature for Gastric Cancer
Dataset
EGAD00001008091
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Download Metadata
Documentation
access/download/metadata
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NHLBI TOPMed - NHGRI CCDG: Early-onset Atrial Fibrillation in the CATHeterization GENetics (CATHGEN) Cohort
Study
phs001600
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Genome-wide SNP and CNV analysis identifies common and low-frequency variants associated with severe early-onset obesity
Study
EGAS00001000878
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Bulk RNA-sequencing datasets from Caco-2 cells under normal or inflamed conditions treated with 4HTBZ or vehicle.
Dataset
EGAD50000001759
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Genotype data for The admixture histories of Cabo Verde - genotype data
Dataset
EGAD00001008979
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Maintenance of Genome Sequence Integrity in Long- and Short-lived Rodent Species
Study
phs002610
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National Cancer Institute (NCI) Prostate Cancer Genome-Wide Association Study for Uncommon Susceptibility Loci (PEGASUS)
Study
phs000882
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Functional Multiomics of Cellular Therapy and Immune Checkpoint Blockade Therapy for Solid Tumors
Study
phs002762
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Isala Cross sectional Flow Meta Data
Dataset
EGAD00001009890
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EORTC-26101 sequencing data
Dataset
EGAD00001011160
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RNA sequencing from patient-derived intestinal organoids
Dataset
EGAD50000000492
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Submitting array based metadata
Documentation
submission/metadata/submission/array
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National Eye Institute (NEI) Age-Related Eye Disease Study 2 (AREDS2)
Study
phs002015
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Immune Profiling in Patients with High-Risk Smoldering Myeloma
Study
phs002476
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Modulation of Lung Immune Responses to Viral Infection-Microbiome Interactions with Respiratory Organoids
Study
phs003627
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bulk Exome-seq of the 5 HCC patients which also have the single cell T cell RNA-seq data
Dataset
EGAD00001004149
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scATAC-seq of first and second trimester human gonads - HUGODECA dataset
Dataset
EGAD00001009387
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bulk RNA-seq of the 5 HCC patients which also have the single cell T cell RNA-seq data
Dataset
EGAD00001004148
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snRNA-seq/snATAC-seq multiome of first and second trimester human gonads - HUGODECA dataset
Dataset
EGAD00001009388
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Genetic and epigenetic characterization of adenoid cystic carcinoma
Dataset
EGAD00001001662
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Orofacial Pain: Prospective Evaluation and Risk Assessment (OPPERA)
Study
phs000761
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Prognostic whole-genome and transcriptome signatures in colorectal cancers
Dataset
EGAD50000000169
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National Heart, Lung, and Blood Institute (NHLBI) Bench to Bassinet Program: The Pediatric Cardiac Genetics Consortium (PCGC) Study
Study
phs001194
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Inherited chromosomally-integrated human herpesvirus 6A/B (HHV-6A/B) genome sequences in the Japanese population
Study
JGAS000240
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eIMPACT Trial: Modernized Collaborative Care to Reduce the Excess CVD Risk of Older Depressed Patients
Study
phs003283
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Single-cell transcriptomic data from tumor samples
Study
EGAS50000001038