23249 results for "ega"

in 37.97 milliseconds.

• PDX WES for #87, #95, #32, #217, #86

  Exome sequencing of tumour PDX and matched patient blood

  Dataset EGAD50000000215

• TSO500 on DNA

  Targeted sequencing using the TruSight Oncology 500 DNA probes panel, on samples 162 and 521

  Dataset EGAD50000000270

• TSO500 on RNA

  TruSight Oncology 500 RNA probes panel on case 521

  Dataset EGAD50000000271

• Knoll et al. 2023, Identification of drug candidates targeting monocyte reprogramming in people living with HIV

  Dac EGAC50000000044

• Universal targeted haplotyping by droplet digital PCR sequencing

  Universal targeted haplotyping by droplet digital PCR sequencing (amplicon sequencing)

  Dataset EGAD50000000458

• Whole Exome Sequencing of Bipolar cases and matched controls performed at the Broad Institute on a cohort from Landen, Stockholm, Sweden.

  Study EGAS00001005838

• RNA-seq in insulinomas

  RNA-seq datasets in human insulinoma samples

  Dataset EGAD50000000462

• WGS in insulinomas

  Whole-Genome Sequencing datasets of insulinoma samples and paired blood controls

  Dataset EGAD50000000464

• A5_SDHB_PCPG_Methylation

  Illumina Infinium MethylationEPIC Array profiling of 93 pheochromocytoma and paraganglioma tumours with and a germline SDHB mutation

  Dataset EGAD00010002667

• Whole Exome Sequencing of Bipolar cases and matched controls performed at the Broad Institute on a cohort from the Netherlands (posthuma)

  Study EGAS00001005857

• Whole Exome Sequencing of Bipolar cases and matched controls performed at the Broad Institute on a cohort from Edinburgh, Scotland, UK.

  Study EGAS00001005843

• QuantSeq 3'-mRNAseq of pathogen-stimulated PBMCs

  5 donors, 4 stimuli, 2 time points

  Study EGAS50000000007

• Single-cell immunogenomics research group

  DAC of single-cell immunogenomics research group (PI Tapio Lönnberg) at Turku Bioscience Centre, University of Turku, Finland.

  Dac EGAC50000000171

• CLL Cancer Whole Genome Sequencing

  CLL Cancer Whole Genome Sequencing

  Dataset EGAD00001000013

• Whole Exome Sequencing of Bipolar cases and matched controls performed at the Broad Institute on a cohort from Cardiff, UK (O'Donovan)

  Study EGAS00001005852

• Transcriptome of insulinomas

  Characterization of the transcriptome of insulinomas by RNA-seq.

  Study EGAS50000000320

• SMPaeds cfDNA lcWGS

  Low coverage whole genome sequencing (0.5-4X) for cfDNA collected from blood plasma.

  Dataset EGAD50000000782

• Indonesian Genome Diversity Project 3

  Term and condition for Indonesian Diversity Project v3. 254 Low Coverage genome from Wallacean and West Papuan, Indonesia

  Dac EGAC50000000312

• Whole Exome Sequencing of Bipolar cases and matched controls performed at the Broad Institute on a cohort from the Netherlands (Ophoff)

  Study EGAS00001005853

• Whole Exome Sequencing of Bipolar cases and matched controls performed at the Broad Institute on a cohort from Stockholm, Sweden (Pedersen)

  Study EGAS00001005856

• Study of renal cancers and renal cancer metastases

  Study EGAS00001001176

• The BAF chromatin remodeling complex is a novel target of spliceosome dysregulation in SF3B1-mutated chronic lymphocytic leukemia

  Study EGAS00001006771

• Elucidating the heterogeneity of immunotherapy response and immune-related toxicities by longitudinal ctDNA and immune cell compartment tracking in lung cancer

  Study EGAS00001007291

• Integrative genomic analyses of European intrahepatic cholangiocarcinoma: new ROS1 fusion gene and PBX1 as prognostic marker

  Study EGAS00001007525

• DAC for Hematological toxicity following CAR-T cells injection

  Data access committee to have access to Hematological toxicity following CAR-T cells injection

  Dac EGAC50000000490

• Cardiac fibroblast DAC

  DAC for reviewing requests to access data on cardiac fibroblasts as described by Aguado-Alvaro et al (Nature Communications, 2025)

  Dac EGAC50000000479

• BCR-HGBCL-DH-BCL2 project DAC

  Data Access Committee for high-grade B cell lymphomas MYC-BCL2 datasets

  Dac EGAC50000000500

• Liquid Biopsy High Grade Serous Ovarian Cancer WGS

  Liquid Biopsy High Grade Serous Ovarian Cancer WGS.

  Dataset EGAD50000001520

• Therapy and RNA group Ghent DAC

  This is a Data Access Committee for datasets of the Therapy and RNA group Ghent (TaRGeT, Belgium).

  Dac EGAC50000000491

• Trained immunity DNA methylation data

  This dataset contains the DNA methylation data of 904 samples from Dutch healthy individuals.

  Dataset EGAD00010002738

• Preoperative ipilimumab plus nivolumab in locoregionally advanced urothelial cancer (NABUCCO Cohorts 1 and 2)

  Study EGAS00001004521

• CeDNN Data Access Committee UMCG

  Celiac Disease Northern Netherlands cohort, set up by the Genetics department of the University Medical Center Groningen (UMCG).

  Dac EGAC50000000584

• HDBR exome sequencing data (August 2024)

  Exome sequencing data from fourteen phenotypically abnormal human fetal samples.

  Dataset EGAD50000000722

• HDBR exome sequencing data (December 2024)

  Exome sequencing data from sixteen phenotypically abnormal human fetal samples.

  Dataset EGAD50000001809

• Whole Exome Sequencing of Bipolar cases and matched controls performed at the Broad Institute on a cohort from Cardiff, UK (Owen)

  Study EGAS00001005855

• Small Intestine Adenocarcinoma Subtyping Data Access Committee

  DAC created for the Molecular classification of small intestinal adenocarcinomas Study in Amsterdam UMC.

  Dac EGAC50000000663

• Comprehensive Characterization of Early Relapse and End-Stage Relapsed Refractory Multiple Myeloma (HIPO K08K/H067/H021+nonHIPO)

  Study EGAS00001007469

• HNSCC Patients Treated with Immune Checkpoint Blockade

  HNSCC Patients Treated with Immune Checkpoint Blockade

  Study EGAS50000001175

• Kinomics data

  To ellucidate protein activity in mRCC, Kinomics data was generated as part of the EuroTarget study

  Dataset EGAD50000002293

• Study of PD-1 negative CD8 effector T-cells in advanced HCC with single-cell sequencing

  Study EGAS00001007547

• Genome-wide DNA Methylation Analysis Reveals a Unique Methylation Pattern for Pleural Mesothelioma Compared to Healthy Pleura and Other Lung Diseases

  Study EGAS00001007783

• Chordoma_Extension_Study

  Extension analysis to pursue candidate genes of interest in chordoma

  Study EGAS00001000892

• Chordoma_Extension__known_cancer_genes_

  Extension analysis to pursue candidate genes of interest in chordoma

  Study EGAS00001000895

• Giant congenital nevi exome sequencing

  Characterization of the genomic landscape of giant congenital nevi.

  Study EGAS00001004541

• Very short reads file for testing purposes

  Very short FASTQ reads file for testing purposes

  Study EGAS00001001701

• Kidney_tumour_DNA_exome

  This is an exome DNA sequencing study of human renal tumours

  Study EGAS00001003616

• ADAPTeR Study: RNAseq data from ccRCC patients

  RNAseq from tumour, mets, and PEACE study

  Study EGAS00001005637

• WGS

  Whole-genome sequencing of pancreatic cancer organoids and matched germline controls.

  Study EGAS00001007211

• DLBCLR

  Evaluating gene expression in DLBCL using a quantitative nuclease protection assay

  Study EGAS00001007479

• SNP array ARID1B patients

  SNP array ARID1B patients. Data from PBMCs and iPSCs.

  Study EGAS00001007381

• Spatial Transcriptomic BC ILC

  Fastq files from 4 Visium spatial transcriptomic ILC sections

  Dataset EGAD50000002494

• Human iPSC-derived brain cell RNA sequencing data DAC at UEF (DAC-hiPSC)

  RNA sequencing data from human iPSC-derived cell model systems

  Dac EGAC50000000949

• RNAseq data

  RNAseq data for 10 patients: 10 tumors and 10 cell lines

  Dataset EGAD00001002691

• Indel/point mutation of chondrosarcoma

  Indel/point mutation of chondrosarcoma

  Dataset EGAD00001000874

• TST170 Pilot RNA BAM

  TST170 Pilot RNA BAM files

  Dataset EGAD00001006044

• Brain mets discovery cohort variant calls

  These are the variant calls for the 50 brain tumour samples in the discovery cohort.

  Dataset EGAD00001005982

• G_WTS_001 data

  RNA-seq data from Korean CRC samples

  Dataset EGAD00001006985

• ICGC PACA-CA Release 20

  ICGC PACA-CA Release 20

  Dataset EGAD00001001595

• Neurodegenerative_TGS

  An investigation of clonal haematopoiesis in patients with neurodegenerative disease.

  Dataset EGAD00001006392

• BCL2 Break NegativeFollicular Lymphoma

  Whole Exome Sequencing reads consisting of BAM paired end reads from Follicular Lymphoma samples.

  Dataset EGAD00001003509

• German early-onset prostate cancer whole-genome sequencing samples of the Pan-Prostate Cancer Genome (PPCG) project

  Dataset EGAD00001005997

• AngioPredict CNV and Exome data

  AngioPredict CNV and Exome data

  Dataset EGAD00001004031

• Hessequa-descendants mitogenomes

  Complete sequence of the mitochondrial DNA of 87 Hessequa-descendant individuals

  Dataset EGAD00001007676

• PRECISION WES

  WES dataset obtained using Illumina HiSeq 2500, Swift Bioscience library kit, paired reads.

  Dataset EGAD00001009639

• Exome sequencing VCF files for glioma progression

  Exome sequencing VCF files describing mutations during glioma progression.

  Dataset EGAD00001001887

• Belgian epilepsy patients

  The genomic sequence of brain expressed miRNA genes was sequenced in Belgian epilepsy patients.

  Dataset EGAD00001001851

• Whole-genome sequencing

  Whole-genome sequencing (WGS) data.

  Dataset EGAD00001008778

• WXS of 3 samples

  WXS of 3 samples

  Dataset EGAD00001004994

• Illumina_WGS_BL

  Whole-genome sequencing on Illumina HiSeq2000/2500 of Blood EDTA

  Dataset EGAD00001002082

• 36 mouse plasma cell-free DNA cases

  36 mouse plasma cell-free DNA cases

  Dataset EGAD00001008810

• Retinal Dystrophy Dataset

  Dataset form patines with retinal dystrophies.

  Dataset EGAD00001007755

• HiChIP fastq files

  HiChIP experiments with two sequencing libraries each. Illumina HiSeq 4000/2500.

  Dataset EGAD00001006278

• Neuroblastoma Whole Exome Sequencing

  Mapped BAM files of 162 tumor/normal WES experiments.

  Dataset EGAD00001004450

• OT2_Illumina_WXS_BL

  Whole-exome sequencing on Illumina HiSeq2000/2500 of Blood EDTA (OT2_cohort)

  Dataset EGAD00001003377

• WGS and WXS files for Dyer ATRX study

  WGS and WXS files for Dyer ATRX study

  Dataset EGAD00001003389

• RNA-Seq data for Juvenile Pilocytic Astrocytomas

  RNA-Seq data for 9 JPA samples.

  Dataset EGAD00001009043

• Swedish schizophrenia patients

  The genomic sequence of brain expressed miRNA genes was sequenced in Swedish schizophrenia patients

  Dataset EGAD00001001849

• miRNA seq data of 13 cases

  miRNA seq data of 13 cases (MMML)

  Dataset EGAD00001001632

• Whole genome sequencing data of ccRCCs

  Whole genome sequencing data of ccRCCs were utilized for somatic variations calling.

  Dataset EGAD00001004588

• Biomarker Data Subset

  This dataset contains data for CBC counts and absolute protein abundance measurements from ELISA experiments.

  Dataset EGAD00001011163

• PCa RNASeq data

  RNASeq data from paired malignant/benign prostate tissues

  Dataset EGAD00001005931

• European Hereditary Tumour Group

  This DAC controls access to entries submitted to the European Hereditary Tumour Group datasets according to the EHTG policies.

  Dac EGAC50000000969

• LCNEC study - RNAseq data set

  RNAseq Data set

  Dataset EGAD00001003801

• Bacteria Lateral sclerosis

  The study aims to find bacteria in neural tissue from patients with amyotrophic lateral sclerosis

  Dataset EGAD00001004458

• Primary angiosarcoma Whole Genome Sequencing

  Whole genome sequencing of primary angiosarcoma

  Dataset EGAD00001001266

• Exome sequencing of nine PCC/PGL tumors

  Exome sequencing of nine PCC/PGL tumors, SF and FFPE samples

  Dataset EGAD00001001854

• AML relapse targeted resequencing

  Raw data (fastq files) from targeted resequencing of AML patients at relapse

  Dataset EGAD00001002118

• AML diagnosis targeted resequencing

  Raw data (fastq files) from targeted resequencing of AML patients at diagnosis

  Dataset EGAD00001002117

• Dundee Metformin response GWAS Phenotype 2016

  Variation in the Glucose Transporter gene SLC2A2 is associated with glycaemic response to metformin

  Dataset EGAD00001002277

• Sharc-ovarian

  Low coverage nanopore sequencing of ovarian cancer tumors

  Dataset EGAD00001005472

• 20200417_PNET_methylation_paper

  Illumina platform RNA-seq data from 47 Pancreatic neuroendocrine tumour samples

  Dataset EGAD00001006063

• Accelerated single cell seeding in relapsed multiple myeloma

  25 Whole genome sequencing data cases

  Dataset EGAD00001006119

• Phylogenetic reconstruction of breast cancer

  This dataset contains the fastq files used for this study

  Dataset EGAD00001006121

• T200 sequencing Phase Ib of olaparib and capivasertib

  T200 sequencing (Phase Ib of olaparib and capivasertib)

  Dataset EGAD00001006841

• UTUC RNAseq data

  RNA sequencing of upper urinary tract urothelial carcinoma

  Dataset EGAD00001007667

• Targeted Sequencing Xenturion

  Targeted sequencing of a biobank of PDOs PDXs and LMHs

  Dataset EGAD00001009653

• RNAseq

  RNAseq of pancreatic cancer organoids.

  Dataset EGAD00001010834

• Gene signature for predicting homologous recombination deficiency in triple-negative breast cancer

  We developed a gene expression-based classifier for homologous recombination deficiency (HRD) in breast cancer patients using WES and RNA-seq data obtained from 94 TNBC samples from a Malaysian hospital-based cohort (MyBrCa). This classifier was able to predict for high levels of a mutational signature associated with HRD in an additional MyBrCa TNBC validation cohort (this EGA study) as well as in TNBCs from TCGA. We also validated the classifier on a NanoString platform with both fresh frozen and FFPE tissue.

  Study EGAS00001006518

• Glioma Genomics Committee

  Dac EGAC00001000153

• MSI-Exome-DAC Team Microsatellites Instability and Cancer, INSERM Hospital Saint-Antoine, Paris 12, France Carte d'identité des tumeurs, French league against cancer, Paris France

  Dac EGAC00001000665