22938 results for "ega"

in 40.18 milliseconds.

• PCHiC

  PCHiC

  Dataset EGAD00001002268

• DNA BAM

  DNA BAM files

  Dataset EGAD00001005503

• Human dnase1l3 deficiency-Mouse AAV samples

  Human dnase1l3 deficiency-Mouse AAV samples

  Dataset EGAD00001006215

• SF4454

  Astrocytoma (WHO gr. 2)

  Dataset EGAD00001006318

• HER2-negative primary breast cancers WES

  Temporal HER2-negative breast cancers WES

  Dataset EGAD00001006980

• dataset for BGI bladder cancer project

  dataset for BGI bladder cancer project

  Dataset EGAD00001000758

• Test dataset: Sequence and variant data from public 1000 Genomes Project

  This is a test dataset derived from public data of the 1000 Genomes Project. Its purpose is not to allow for any inference about cohort data or results, but to aid bioinformaticians in the technical development and testing of tools, as well as data consumers in learning how to access information. This dataset consists of 2508 samples from the 1000 Genomes Project (https://www.nature.com/articles/nature15393). Samples' (e.g. NA18534) data can be accessed through the IGSR portal (e.g. https://www.internationalgenome.org/data-portal/sample/NA18534) or their corresponding folder at the 1000 Genomes' FTP site (e.g. http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/data_collections/1000_genomes_project/data/CHB/NA18534/exome_alignment/). There are several different types of data this dataset encompasses: Variant Calling Format (VCF, or its binary counterparts BCF) files, both joint (e.g. ALL_chr22_20130502_2504Individuals.vcf.gz) and split (HG01775.chrY.vcf.gz); exome sequencing CRAM files (e.g. NA18534.GRCh38DH.exome.cram); whole genome sequencing CRAM/BAM files (e.g. NA19239.cram). Additionally, there are multiple files that were sliced to create shorter files, which allows for a quick download, formated as "{FILE-INFO}__{NUMBER-OF-READS}r__{CHR}.{START-COORDINATE}-{END-COORDINATE}.{FILETYPE}" (e.g. "HG01500.GRCh38DH__90r__3.10000-10500__4.10000-10500.cram"). These files can be downloaded directly through the EGA-download-client PyEGA3 (https://github.com/EGA-archive/ega-download-client).

  Dataset EGAD00001003338

• The evolutionary dynamics of human colorectal cancer using single-gland spatial multi-omic profiling of DNA, RNA and chromatin.

  Study EGAS00001006088

• The evolutionary dynamics of human colorectal cancer using single-gland spatial multi-omic profiling of DNA, RNA and chromatin.

  Study EGAS00001006122

• The evolutionary dynamics of human colorectal cancer using single-gland spatial multi-omic profiling of DNA, RNA and chromatin.

  Study EGAS00001005827

• High Throughput Data_Hematological Malignancies

  Dac EGAC00001000428

• Children's Cancer Therapy Institute DAC

  Dac EGAC00001001828

• DATA ACCESS WITH REGARDS TO EXOME-WIDE ASSOCIATION ANALYSIS OF CORONARY ARTERY DISEASE IN THE KINGDOM OF SAUDI ARABIA POPULATION

  Dac EGAC00001000420

• DAC for high resolution genomic data generated by the Gisselsson Group at the Department of Clinical Genetics, Lund University.

  Dac EGAC00001000534

• Transcriptional and DNA binding profiling of CEBPE in REH acute lymphoblastic leukaemia cells using shRNA RNA-Seq and ChIP-Seq

  Dac EGAC00001000891

• The data access committee for Multimodal Genomic Features Predict Outcome of Immune Checkpoint Blockade in Non-small Cell Lung Cancer

  Dac EGAC00001001331

• Data access committee for white blood cell and cell-free DNA analyses for detection of residual disease in gastric cancer

  Dac EGAC00001001435

• Data Access Commitee for study Fine-Scale Genomic Analyses Of Admixed Individuals Reveal Unrecognized Genetic Ancestry Components In Argentina

  Dac EGAC00001001634

• Access to aligned sequencing data for study "Loss of SNAI2 in prostate cancer correlates with clinical response to androgen deprivation therapy".

  Dac EGAC00001001809

• Novel de novo pathogenic variant in the GNAI1 as a cause of severe disorders of intellectual development with autistic features

  Dac EGAC00001002145

• Novel de novo pathogenic variant in the GNAI1 as a cause of severe disorders of intellectual development with autistic features

  Dac EGAC00001002151

• Data Access Commitee - Monocyte and macrophage lipid accumulation results in downregulated type-I interferon responses - FH monocytes RNA sequencing data

  Dac EGAC00001002495

• EGAD00000000030

  T1DGC project 1958 British Birth Cohort samples

  Dataset EGAD00000000030

• EGAD00000000058

  Aggregate results from 22 Carbamazepine-induced hypersensitivity syndrome patients and 2691 UK National Blood Service (NBS) control samples

  Dataset EGAD00000000058

• EGAD00000000059

  Aggregate results from 43 Carbamazepine-induced hypersensitivity syndrome patients and 1296 1958 British Birth Cohort control samples

  Dataset EGAD00000000059

• Summary data from case control analysis

  Summary data from GWAS analysis on 856 cases and 2836 control

  Dataset EGAD00000000115

• EGAD00010000692

  Genome-wide DNA methylation epigenotyping of African rainforest hunter-gatherers and neighbouring agriculturalists by Illumina HumanMethylation450

  Dataset EGAD00010000692

• EGAD00010000781

  HipSci - Bardet-Biedl Syndrome - Methylation Array - April 2015

  Dataset EGAD00010000781

• EGAD00010000783

  HipSci - Bardet-Biedl Syndrome - Expression Array - November 2014

  Dataset EGAD00010000783

• EGAD00010000148

  tumour samples using Affymetrix Genome-Wide SNP6.0 arrays

  Dataset EGAD00010000148

• EGAD00010000262

  WTCCC2 project Schizophrenia (SP) samples

  Dataset EGAD00010000262

• EGAD00010000276

  SCLC tumor genotypes

  Dataset EGAD00010000276

• EGAD00010000446

  Monocyte Gene Expression

  Dataset EGAD00010000446

• EGAD00010000448

  Macrophage Gene Expression

  Dataset EGAD00010000448

• TMD_AMLK Exome Study

  TMD_AMLK Exome Study

  Dataset EGAD00001000070

• CRLF2 sequencing project

  CRLF2 sequencing project

  Dataset EGAD00001000076

• Primary Myelofibrosis Myeloproliferative Disease exome sequencing

  Primary Myelofibrosis Myeloproliferative Disease exome sequencing

  Dataset EGAD00001000106

• Sequencing Acute Myeloid Leukaemia

  Sequencing Acute Myeloid Leukaemia

  Dataset EGAD00001000124

• Renal Follow Up Series

  Renal Follow Up Series

  Dataset EGAD00001000142

• DATA FILES FOR SJEPD

  DATA FILES FOR SJEPD

  Dataset EGAD00001000162

• Dilgom Exome

  Dilgom Exome

  Dataset EGAD00001000200

• OICR PANCREATIC CANCER DATASET 2

  OICR PANCREATIC CANCER DATASET 2

  Dataset EGAD00001000276

• WGS DATA FILES FOR SJCBF

  DATA FILES FOR SJCBF

  Dataset EGAD00001000268

• DATA_SET_TRANSCIPTOME_Comparing_sequencing_four_proto-typical_Burkitt_lymphomas_BL_IG-MYC_translocation

  DATA_SET_TRANSCIPTOME_Comparing_sequencing_four_proto-typical_Burkitt_lymphomas_BL_IG-MYC_translocation

  Dataset EGAD00001000274

• UK10K_OBESITY_GS_REL_2012_07_05

  UK10K_OBESITY_GS_REL_2012_07_05

  Dataset EGAD00001000300

• DATA FILES FOR SJEPD

  DATA FILES FOR SJEPD

  Dataset EGAD00001000853

• BCC exomes and transcriptomes

  Dataset EGAD00001001857

• The study of response to EGFR Blockade in Colorectal Cancer

  Dataset EGAD00001001628

• The study of response to EGFR Blockade in Colorectal Cancer

  Dataset EGAD00001001674

• Whole exome sequencing data from two patients with isolated myelosarcoma followed by acute myeloid leukemia

  Dataset EGAD00001003831

• SAHGP Dataset

  HumanOmni25M-8v1-1

  Dataset EGAD00010001418

• B99

  Cardio-Metabochip genotypes for B99 cohort

  Dataset EGAD00010001427

• IHIT

  Cardio-Metabochip genotypes for IHIT cohort

  Dataset EGAD00010001428

• omnix_tibet

  Himalayan population genetic study raw data (Tibet)

  Dataset EGAD00010001473

• omnix_himalaya

  Himalayan population genetic study raw data (Himalaya)

  Dataset EGAD00010001470

• UKB_Genotyped 2018

  The UK BioBank directly genotyped dataset 2018

  Dataset EGAD00010001497

• OGVP_HC24_Controls

  Healthy adult volunteers and newborns recruited in various countries across Oceania.

  Dataset EGAD00010000953

• RHD_FJ_OMNI_Cases

  Rheumatic heart disease cases recruited in Fiji with higher density genotyping

  Dataset EGAD00010000955

• methylomics

  Methylomics analysis results formatted as a beta matrix

  Dataset EGAD00010001660

• OA Functional Genomics

  Functional genomics approaches to understand osteoarthritis

  Dataset EGAD00010001746

• ustuyzhna

  Genotypes of Russian people from Ustuyzhna (Vologda Oblast, Russia)

  Dataset EGAD00010001775

• Weige_450k_Control

  Control human dermal fibroblasts from patient forearm

  Dataset EGAD00010001879

• Weige_450k_Case

  Case human dermal fibroblasts from patient forearm

  Dataset EGAD00010001880

• Belgium-Immuno

  Belgium Multiple Sclerosis cases and normal controls

  Dataset EGAD00010002045

• BSG Methylation Dataset

  Epigenome of brainstem gliomas

  Dataset EGAD00010001859

• France-Immuno

  France Multiple Sclerosis cases and normal controls

  Dataset EGAD00010002046

• ATAC

  ATAC-seq non-overlapping fixed width peaks with score normalization. Software: MACS2 v2.1.2

  Dataset EGAD00010001928

• AUSNZ-Immuno

  Australia and New Zealand Multiple Sclerosis case

  Dataset EGAD00010002047

• Germany-Immuno

  Germany Multiple Sclerosis cases and normal controls

  Dataset EGAD00010002044

• BreastCancer_Control_Micorarays

  Genotyping array data for normal mammary gland control samples

  Dataset EGAD00010002250

• Methylation profiles in blood (controls)

  Raw methylation data from blood samples in controls.

  Dataset EGAD00010002471

• Genotype_OncoArray

  Genotyping using Illumina OncoArray BeadChip

  Dataset EGAD00010002166

• miso_ecuador_gwas

  Genome-wide genotypes of women with misoprostol-induced high fever

  Dataset EGAD00010002188

• miso_argentina_gwas

  Genome-wide genotypes of women with misoprostol-induced high fever

  Dataset EGAD00010002189

• CGMH data access committee for the CGMH-OCCC-WES data

  CGMH data access committee for the CGMH-OCCC-WES data

  Dac EGAC50000000028

• Bulk RNAseq of cultured fibroblasts

  Bulk RNAseq of cultured fibroblasts

  Dataset EGAD50000000192

• GLASS-NL DNA-Methylation

  DNA-methylation data of samples included in the GLASS-NL cohort

  Dataset EGAD00010002647

• Genetic landscape of Extranodal NK/T-cell lymphoma

  Targeted-capture sequencing data from 168 ENKTCL patients

  Dataset EGAD50000000448

• HCEMM - Semmelweis University Molecular Oncohematology Research Group DAC

  Data Access Committee of the HCEMM - Semmelweis University Molecular Oncohematology Research Group

  Dac EGAC50000000091

• scRNAseq

  ARID1B+/+ (control) and ARID1B+/- human telencephalic organoids at D120

  Study EGAS50000000344

• scMultiomics

  ARID1B+/+ (control) and ARID1B+/- human telencephalic organoids at D120

  Study EGAS50000000343

• Time series analysis of neoadjuvant chemotherapy and bevacizumab treated breast carcinomas reveals a systemic shift in genomic aberrations

  Study EGAS00001003287

• HPRU in Respiratory Infections DAC

  DAC to oversee data owned from the HPRU in Respiratory Infections at Imperial College London

  Dac EGAC50000000307

• Whole Exome Sequencing of Schizophrenia cases and controls performed at the Broad Institute on a cohort from Bristol, UK

  Study EGAS00001006274

• T-ALL transcriptome sequence study

  Dataset EGAD00001000849

• IMPRESS: Improved Methylation Profiling using Restriction Enzymes and smMIP Sequencing, Combined with New Biomarker Panel, Creating Multi-Cancer Detection Assay

  Study EGAS00001007559

• Sarcoma long-read nanopore whole-genome sequencing Data Access Committee

  Sarcoma long-read nanopore whole-genome sequencing Data Access Committee.

  Dac EGAC50000000415

• MDACC GBM Data Access Committee

  Retrospective global-omics analyses of an anti-PD-L1 treated cohort of newly diagnosed glioblastoma.

  Dac EGAC50000000477

• Inferring tumor genomes from peripheral blood i.e. CTCs and plasma-DNA using deep sequencing and targeted enrichment

  Study EGAS00001000337

• TallFlow: Lineage tracing of immunophenotypic sub populations in T-cell Acute lymphoblastic leukemia by (sc-)WGS

  Study EGAS00001007446

• Whole-genome sequencing of a census-based elderly cohort of Brazilians

  Study EGAS00001005052

• DNA polymerase and mismatch repair deficient cancers exert distinct genome-wide microsatellite signatures 2

  Study EGAS00001004816

• Small molecule screen reveals synergy of cell cycle checkpoint kinase inhibitors with DNA-damaging chemotherapies in medulloblastoma (RNAseq dataset)

  Study EGAS00001004748

• Characterization of T cell tumor infiltration in brain metastases through the analysis of the cerebrospinal fluid

  Study EGAS00001004751

• CDK4 phosphorylation status and rational use for combining CDK4/6 and BRAF/MEK inhibition in advanced thyroid carcinomas

  Study EGAS00001007577

• Single cell characterization of arrested B-lymphoid differentiation and leukemic cell states in ETV6-RUNX1-positive pediatric leukemia

  Study EGAS00001004374

• RNA sequencing of subchondral bone from patients that underwent a joint replacement surgery due to osteoarthritis.

  Study EGAS00001004476

• Colorectal cancer cells possess an equipotent capacity to enter a developmental pausing-like state to survive chemotherapy

  Study EGAS00001004773

• Clonal dynamics of normal hepatocyte expansions in homeostatic human livers and their association with the biliary epithelium

  Study EGAS00001005539

• Single-cell RNA sequencing of a PBMC sample collected from a male with 45,X/48,XYYY karyotype

  Study EGAS00001005697

• Mutations in ALK signaling pathways conferring resistance to ALK inhibitor treatment lead to collateral vulnerabilities in neuroblastoma cells

  Study EGAS00001005791

• Longitudinal monitoring of disease burden and response using ctDNA from dried blood spots in xenograft models

  Study EGAS00001006134

• Molecular determinants of outcomes in relapsed mantle cell lymphoma treated with ibrutinib or temsirolimus in the MCL3001 (RAY) trial

  Study EGAS00001006342

• Complex patterns of genomic heterogeneity identified in 42 tumor samples and ctDNA of a pulmonary atypical carcinoid patient

  Study EGAS00001006530

• Targeted exome DNA sequencing analysis of POETIC Good/Poor Responders to aromatase inhibitors based on change in Ki67

  Study EGAS00001007303

• Patient-derived organoids identify tailored therapeutic options and determinants of plasticity in sarcomatoid urothelial bladder cancer

  Study EGAS00001007430

• Therapeutic vulnerabilities in CCA from different etiologies identified using integrative multi-omics enhancer activity profiling

  Study EGAS00001007309

• The data access committee for Genome-wide analyses of cell-free DNA for therapeutic monitoring of patients with pancreatic cancer

  Dac EGAC50000000588

• Okayama University Hospital, CGM center, DAC

  Okayama University Hospital, Japan Centre for Comprehensive Genomic Medicine (CGM) Data Access Committee

  Dac EGAC50000000250

• RNA-seq of lung neuroendocrine tumors

  RNA-seq of lung neuroendocrine tumors

  Study EGAS50000000058

• DAC for pediatric AML genomic sequences

  DAC for dataset containing matched tumor-healthy genomic sequences from patients with pediatric AML

  Dac EGAC50000000666

• DAC for DLBCL dataset

  Data Access Committee for cfDNA sequencing dataset from 290 samples from patients with DLBCL and HGBL.

  Dac EGAC50000000257

• Human skeletal muscle CD90+ fibro-adipogenic progenitors are associated with muscle degeneration in type 2 diabetic patients

  Study EGAS00001005599

• Plasma ctDNA is a tumor tissue surrogate and enables clinical-genomic stratification of metastatic bladder cancer

  Study EGAS00001004615

• 500FG DNA methylation data

  This dataset contains the DNA methylation data of 260 samples from Dutch healthy individuals.

  Dataset EGAD00010002769

• Transcriptome Sequencing Data of High Grade Serous Ovarian Cancer

  Study EGAS00001004714

• DAC for the access to IMMUcan data

  This DAC will assess the requests for the access to IMMUcan data

  Dac EGAC50000000829

• Kerl Pediatric Oncology Münster

  Kerl lab at the Department of Pediatric Hematology and Oncology, University Hospital Münster, Münster, Germany

  Dac EGAC50000000765

• TFTAK Data Access Committee

  The TFTAK Data Access Committee (TFTAK DAC) oversees access to data generated by TFTAK research projects.

  Dac EGAC50000000885

• Next generation sequencing of plasma cell neoplasms

  Includes raw data for genome sequencing studies performed at the University of Miami

  Dac EGAC50000000593

• ICR MOPOPGEN UK exome control series

  ICR MOPOPGEN UK exome control series

  Study EGAS00001001667