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• RNAseq of U251 and two ID1 gene knockouts

  RNAseq of U251 and two ID1 gene knockouts

  Dataset EGAD00001005089

• Exome sequencing of isolate populations and Generation Scotland

  Exome sequencing of isolate populations and Generation Scotland

  Dataset EGAD00001002715

• Data Access Policy of the HCEMM - Semmelweis University, Molecular Oncohematology Research Group

  Dac EGAC00001003240

• The University of Hong Kong Gastric Cancer Exome Sequencing Project Data Access Committee

  Dac EGAC00001000032

• Cancer genomics project, the University of Tokyo Data Access Committee

  Dac EGAC00001000087

• Data access committee of the Prostate Cancer Research Center, University of Tampere, Finland.

  Dac EGAC00001000423

• The Chinese University of Hong Kong Hereditary Spastic Paraplegia Data Access Committee

  Dac EGAC00001000493

• The evolutionary history of human colitis-associated colorectal cancer

  Dac EGAC00001000917

• The molecular landscape of glioma in patients with Neurofibromatosis 1

  Dac EGAC00001001004

• The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG)

  Dac EGAC00001002557

• The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG)

  Dac EGAC00001002696

• The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG)

  Dac EGAC00001002697

• The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG)

  Dac EGAC00001002723

• The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG)

  Dac EGAC00001002732

• The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG)

  Dac EGAC00001002815

• The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG)

  Dac EGAC00001002879

• The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG)

  Dac EGAC00001003017

• The Multiomics Blueprint of Extreme Human Lifespan

  Dac EGAC50000000515

• Analysis of the genomic landscape of chemoresistant multiple myeloma

  Study EGAS00001003709

• Somatic_mutation_in_edited_cholangiocyte_organoids__Targeted_NanoSeq_

  Characterisation of mutation rates and patterns in edited human cholangiocyte organoids (Targeted NanoSeq)

  Study EGAS00001007266

• Osteosarcoma sequencing data

  This study shares DNA and RNA sequencing data from embryonal rhadbomyosarcoma patients

  Study EGAS00001005600

• Somatic_mutation_in_edited_cholangiocyte_organoids_NanoSeq

  Characterisation of mutation rates and patterns in edited human cholangiocyte organoids (NanoSeq)

  Study EGAS00001006405

• PBAT sequencing of cytotrophoblast and mural trophectoderm

  PBAT sequencing of primary first trimester cytotrophoblast and mural trophectoderm.

  Dataset EGAD50000000937

• Ovarian subtypes tumor methylation data

  This dataset contains ovarian endometriod and ovarian, stomach, pancreatic and colorectal mucinous tumor tissue samples

  Dataset EGAD00010002773

• Blood dataset - Case-control

  blood-based gene expression from breast cancer cases and age-matched controls

  Dataset EGAD00010001062

• 11 plasma cases and 4 urine cases (mouse)

  11 plasma cases and 4 urine cases (mouse)

  Dataset EGAD00001009829

• GCAT| Sex and Age

  Sex, age at recruitment (2014-2018), and birthdate of GCAT Cohort individuals.

  Dataset EGAD00001007729

• RNA-seq Phase Ib of olaparib and capivasertib

  RNA-seq Phase Ib of olaparib and capivasertib

  Dataset EGAD00001006840

• Heterogeneous Genomic Evolution and Immune Microenvironments in Metastatic Lung Cancer

  WES data of paired primary and metastatic tumors

  Dataset EGAD00001006213

• MDACC Lymphoma & Myeloma WGS of Tumor and Non-tumor Cells in Multiple Myeloma

  FastQ files from paired tumor and non-tumor WGS data from patients diagnosed with newly diagnosed (n = 6), refractory/relapsed multiple myeloma (n = 3) or plasma cell leukemia (n = 1). These samples presented >95% tumor PCs in bone marrow aspirates. Plasma cells and T cells (non-tumor cells) were isolated from bone marrow aspirates using a magnetic approach.

  Dac EGAC50000000282

• Spatial transcroptomic analyses against non-metastatic and metastatic lymph node from breast cancer patients

  We performed spatial transcroptomic analyses against non-metastatic and metastatic lymph node from breast cancer patients to investigate how metastasized breast cancer cells affect gene expression in lymph nodes

  Study JGAS000616

• RNA sequencing of OM-ALI cultures derived from control and AD individuals exposed to SARS-CoV-2

  RNA sequencing of air-liquid interface (ALI) cultures of olfactory mucosa (OM) cells derived from control (n=3) and AD (n=3) individuals exposed to SARS-CoV-2.

  Study EGAS50000000408

• Integrated drug screening and molecular profiling in pediatric AML

  This study aims at identifiying functional-genomic predictors of patient risk in pediatric AML by performing image-based drug response profiling and comprehensive molecular profiling on primary pediatric AML samples

  Study EGAS50000001083

• Exome-sequencing from monocytes (CD14pos), T-lymphocytes (CD3pos) and iGRAN (CD14neg) cells from CMML patients

  Exome-sequencing from monocytes (CD14pos), T-lymphocytes (CD3pos) and iGRAN (CD14neg) cells from CMML patients [Publication title] CXCL8 secreted by immature granulocytes inhibits wildtype hematopoiesis in chronic myelomonocytic leukemia

  Study EGAS50000000557

• Molecular Classification of Hormone Sensitive and Castration Resistant prostate cancer, using non-negative matrix factorization molecular subtyping

  We aim to identify molecular subtypes of prostate cancer using consensus non-negative matrix factorization and correlate these with existing biomarkers to inform future immunotherapeutic strategies.

  Study EGAS00001006204

• WGS of Newly Diagnosed and Refractory/Relapsed Multiple Myeloma

  This dataset includes paired tumor and non-tumor WGS data from patients diagnosed with newly diagnosed (n = 6), refractory/relapsed multiple myeloma (n = 3) or plasma cell leukemia (n = 1). These samples presented >95% tumor PCs in bone marrow aspirates. Plasma cells and T cells (non-tumor cells) were isolated from bone marrow aspirates using a magnetic approach.

  Dataset EGAD50000001177

• Low-coverage whole-genome sequencing of cancer and healthy plasma circulating DNA

  Plasma samples from patients with melanoma (stage II/III/IV) and breast cancer (stage IV) as well as healthy individuals were subjected to low-coverage whole-genome sequencing (less than 10x average depth). This dataset contains raw fastq files from 39 breast cancer, 127 melanoma and 42 healthy control plasma samples.

  Dataset EGAD00001011817

• Genome-wide array data Algeria

  This dataset contains genome-wide array data from Amazigh (Chaoui and Mozabite) and non-Amazigh Algerian individuals. Chaoui were sampled in Oum El Bouaghi (n=47), Batna (n=46), and Khenchela (n=37). Mozabite were sampled in Ghardaïa (n=14). Non-Imazighen were sampled in Algiers (n=34).

  Dataset EGAD00001010900

• Whole exome and MiSeq HTT sequencing of Huntington's disease patient samples

  Sequencing of Huntington's disease patient samples. Whole exome sequencing (n = 463) and MiSeq HTT amplicon sequencing (n = 584) BAM/BAI files. Two analyses (one linear and one logistic) with relevant files.

  Dataset EGAD00001009077

• Blood and skin fibroblasts PSA study

  This dataset contains RNA-sequencing of blood samples from Healthy Controls (n=7), PSA patients (n=27) and RA patients (n=9). It also contains RNA-sequencing data of skin fibroblasts from healthy controls (n=3) and PSA patients (n=3).

  Dataset EGAD00001009069

• Extramammary Paget Disease

  37 surgical samples were interrogated by WXS, and 50 formalin-fixed, paraffin-embedded samples were interrogated by target-seq. Agilent SureSelect XT kit and SureSelect Human Exon V6 were used to generate exome libraries. Agilent SureSelect XT low input kit and custom capture panel designed on SureDesign were used to generate target-seq libraries. All libraries were sequenced on Illumina HiSeq 2500 platform.

  Dataset EGAD00001006449

• Wilm's tumor sequencing data

  This study shares DNA and RNA sequencing data from Wilm's tumor patients

  Study EGAS00001005690

• The_genetic_evolution_of_precursor_lesions_in_pancreatic_cancer

  Mapping genetic evolution of pancreatic cancer precursor lesions such as IPMNs and PanINs.

  Study EGAS00001001573

• Alveolar Rhabdomyosarcoma sequencing data

  This study shares DNA and RNA sequencing data from alveolar rhadbomyosarcoma patients

  Study EGAS00001005387

• Embryonal Rhabdomyosarcoma sequencing data

  This study shares DNA and RNA sequencing data from embryonal rhadbomyosarcoma patients

  Study EGAS00001005502

• Epithelioid sarcoma sequencing data

  This study shares DNA and RNA sequencing data from Epithelioid sarcoma patients

  Study EGAS00001005983

• Whole genome and whole exome sequencing of ATCWGS42

  This dataset contains whole genome and whole exome sequencing data of ATCWGS42

  Dataset EGAD50000002147

• Proteom study primary CRC and LM

  Proteom characterization in primary colorectal cancer and corresponding liver metastasis

  Dataset EGAD00010002237

• nNGM analysis of treatment-naive MIBC and NMIBC

  nNGM analysis of treatment-naive MIBC (N=49) and NMIBC (N=16).

  Dataset EGAD00001010899

• Clonal evolution study of Intrahepatic cholangiocarcinoma: 69 PDPCs and 6 tissues.

  Clonal evolution study of Intrahepatic cholangiocarcinoma: 69 PDPCs and 6 tissues.

  Dataset EGAD00001003574

• Genome sequencing of childhood acute leukemia in Iraq

  Mutations in acute leukemia vary among countries. To obtain a catalog of mutations of acute leukemia in Iraq, we performed a next-generation sequencing study of childhood acute lymphoblastic and myeloid leukemia. We performed whole-genome sequencing or a combination of whole-exome sequencing to identify somatic and germline mutations + targeted sequencing to identify gene fusions.

  Study EGAS00001005470

• B-ALL bone marrow and CNS xenograft RNA sequencing

  This dataset includes TruSeq paired-end, total RNA sequencing data from primary B-precursor acute lymphoblastic leukaemia (B-ALL) xenografts. It comprises 43 pairs of matched bone marrow (BM) and central nervous system (CNS) human leukaemia cells from individual immunodeficient mice. Xenografts were generated from 6 patients with B-ALL and include samples taken at diagnosis and relapse from 3 of 6 patients.

  Dataset EGAD00001008183

• The University of Hong Kong Gastric Cancer Genomics Study Data Access Committee

  Dac EGAC00001000136

• The University of Hong Kong Gastric Cancer Organoids Genomics Study Data Access Committee

  Dac EGAC00001000981

• The Scientific ethical comittee capital region of Denmark (De videnskabs etiske komiteer region hovedstaden)

  Dac EGAC00001001063

• Expanding the neurodevelopmental phenotypes of individuals with de novo KMT2A variants Data Access Committee

  Dac EGAC00001001147

• Data Access Commitee Polymorphisms in the Mitochondrial Genome associated with Bullous Pemphigoid in Germans

  Dac EGAC00001001341

• DAC: The genomic landscape of primary cutaneous anaplastic large cell lymphoma (pcALCL)

  Dac EGAC00001001607

• The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG)

  Dac EGAC00001002733

• The University of Hong Kong Gastric Cancer Organoids RHO Signaling Study Data Access Committee

  Dac EGAC00001002705

• LEMA

  This DAC will govern access to WES data associated with the LEMA publication

  Dac EGAC50000000560

• Targeted next-generation sequencing of 13 chordoid gliomas of the third ventricle

  Study EGAS00001002733

• Evaluation of the immune effects of tumor-treating electric fields (TTFields) in GBM patients

  Study EGAS00001005392

• The colon KRAS/BRAF variants detection set

  Dataset EGAD00001000835

• The_mutational_landscape_of_recurrent_Glioblastome_multiforme

  Targeted gene screen of approx 120 patients with primary GBM and recurrent samples.

  Study EGAS00001001764

• WGS_of_Somatic_Mosaicism_of_BRCA1_Methylation_in_Malignant_and_Nonmalignant_Breast_Tissue

  WGS of Somatic Mosaicism of BRCA1 Methylation in Malignant and Nonmalignant Breast Tissue

  Study EGAS00001008235

• EMseq_of_Somatic_Mosaicism_of_BRCA1_Methylation_in_Malignant_and_Nonmalignant_Breast_Tissue

  EMseq of Somatic Mosaicism of BRCA1 Methylation in Malignant and Nonmalignant Breast Tissue

  Study EGAS00001008236

• scRNAseq data of HGSOC patients before and after treatment

  scRNAseq data of HGSOC patients before and after treatment

  Dataset EGAD50000000191

• STAG1 and STAG2-ChIP-seq in RAD21-mutant adult acute myeloid leukemia

  STAG1 and STAG2-ChIP-seq in RAD21-mutant adult acute myeloid leukemia

  Dataset EGAD00001015361

• H3Africa NEEDI SNPs and INDELs

  SNPs and INDELs of novel hereditary neurological disease genes in Mali using Beckman 8800, ABI 3730/3730xl.

  Dataset EGAD00001006295

• IfGH-10772

  Clinical and genetic information of an individual with RVOT-VT and a KCNK2 (TREK1) gene mutation obtained after whole exome sequencing.

  Dataset EGAD00001003328

• RNA-Seq and WXS from 6 glioblastoma patients

  RNA-Seq and WXS from 6 glioblastoma patients

  Dataset EGAD00001003293

• Whole exome sequencing of bulk primary tumor (and one lymph node metastasis) and matched blood of six non-metastatic breast cancer patients

  Dataset EGAD00001002746

• Dr. Fatima Mechta-Grigoriou, PhD, DR1 Head of Stress and Cancer Laboratory Deputy Director Genetic and Biology of Cancer Dpt Institut Curie - Inserm U830

  Dac EGAC00001000581

• Exome_NanoSeq__Thyroid_

  Exome NanoSeq in thyroid from a number of donors, both healthy and with pathology.

  Study EGAS00001007175

• Targeted_NanoSeq___Thyroid

  Targeted NanoSeq in thyroid from a number of donors, both healthy and with pathology.

  Study EGAS00001007647

• Clonal IGHV rearrangements in IGH+ and IGHUND HGBCL-DH-BCL2(-BCL6)

  PCR-based VDJ profiling in IGH+ and IGHUND HGBCL-DH-BCL2(-BCL6) lymphomas

  Dataset EGAD50000001523

• RNA-Seq of human stimulated and cultured CD4+ Treg cells

  This dataset includes whole transcriptome data of human stimulated and cultured CD4+ Treg cells (39 samples).

  Dataset EGAD00001005964

• WGS of 8 trios - affected child and both normal parents

  WGS of 8 trios - affected child and both normal parents

  Dataset EGAD00001001467

• Committee of human data related to the manuscript by Germano et al. Ms2016-04-06029

  Dac EGAC00001000750

• Somatic pathogenic variants in the normal mammary gland of sporadic breast cancer patients.

  Dac EGAC00001002391

• The genomic landscape of early-stage ovarian high grade serous carcinoma Data Access Commitee

  Dac EGAC00001002547

• The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG)

  Dac EGAC00001002708

• The Chinese University of Hong Kong (CUHK) Circulating Nucleic Acids Research Group (CNARG)

  Dac EGAC00001003026

• DAC Neurology UKW

  DAC of the Department of Neurology, University Hospital Würzburg (UKW), Würzburg, Germany

  Dac EGAC50000000425

• Single-cell dissection of the immune response after a myocardial infarction

  Study EGAS00001007021

• The whole genome landscape of Burkitt lymphoma subtypes

  Study EGAS00001003778

• Minor intron splicing efficiency increases with the development of lethal prostate cancer

  Study EGAS00001005546

• Comprehensive Whole-Genome Sequence Annotation to Resolve the Genetic Architecture of Cerebral Palsy

  Study EGAS00001006724

• Whole genome sequencing dataset of 200 trio families from the CHILD cohort study.

  Study EGAS00001006725

• The genome-wide mutational consequences of DNA hypomethylation

  Study EGAS00001006845

• The paired FF/FFPE colon set, Exome-Seq

  Dataset EGAD00001000834

• EGAD00000000109

  Gabriel samples from the UK SEVERE cohort

  Dataset EGAD00000000109

• EGAD00000000108

  Gabriel samples from the UK AUGOSA cohort

  Dataset EGAD00000000108

• EGAD00000000107

  Gabriel samples from the multicenter occupational cohort

  Dataset EGAD00000000107

• EGAD00000000106

  Gabriel samples from the multicenter occupational cohort

  Dataset EGAD00000000106

• EGAD00000000105

  Gabriel samples from the multicenter occupational cohort

  Dataset EGAD00000000105

• EGAD00000000104

  Gabriel samples from the Russian UFA cohort

  Dataset EGAD00000000104

• EGAD00000000103

  Gabriel samples from the Russian UFA cohort

  Dataset EGAD00000000103

• EGAD00000000102

  Gabriel samples from the Russian TOMSK cohort

  Dataset EGAD00000000102