23074 results for "ega"

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• Dataset for TIX

  All files for TIX individuals

  Dataset EGAD50000000426

• RNAseq for 4 pdx and 1 cell-line

  RNAseq for #1049, #111, #1217, #206, COV362

  Dataset EGAD50000000032

• DAC IBMsnRNAseq

  This DAC manages the data access to our snRNA-seq and spatial transcriptomic data set on healthy and inflamed human skeletal muscle.

  Dac EGAC50000000220

• Universal targeted haplotyping by droplet digital PCR sequencing

  Universal targeted haplotyping by droplet digital PCR sequencing (Target Capture sequencing)

  Dataset EGAD50000000459

• MAF dataset of Colorectal Cancer Synthetic genomes

  This dataset contains genomic variants data in MAF format from four patients synthetically generated

  Dataset EGAD50000000315

• bfast CohortD ctDNA manifest

  A list of ctDNA samples included in the dataset.

  Dataset EGAD50000000146

• DLBCL cfDNA seq

  Sequencing dataset of 290 DLBCL and HGBL cfDNA samples of paired end 150bp sequencing runs.

  Dataset EGAD50000000602

• Coloured individuals South Africa

  Genotype array data from 152 South African Coloured individuals. Typed on Illumina H3Africa array.

  Dataset EGAD50000000513

• Melanoma post mortem analysis

  This is the affymetrix gene expression data of the metastatic tumours related to this study.

  Dataset EGAD00010001717

• Colorectal cancer functional annotation - ATAC

  ATAC-seq data from multiple colorectal cancer cell lines

  Study EGAS50000000205

• SMPaeds tumour tissue lcWGS

  Low coverage whole genome sequencing (0.5-4X) for both relapse and archival diagnostic tumour tissue.

  Dataset EGAD50000000784

• Tumor Profiler DAC

  The Tumor Profiler DAC is responsible for the access to data generated in the Tumor Profiler Study.

  Dac EGAC50000000199

• PBMC

  Whole-Exome-Sequencing of 5 pooled patients for SNP-based demultiplexing

  Study EGAS50000000654

• Dataset that contains analyses of submission 6

  This is the description of analyses dataset of submission 6

  Dataset EGAD50000001107

• BREAKFAST trial DAC

  Data Access Committee for BREAKFAST trial datasets, IFOM-ETS The AIRC Institute of Molecular Oncology and INT Istituto nazionale Tumori Milano, Italy.

  Dac EGAC50000000401

• Czech Roma and non-Roma array data

  42 Roma and 52 non-Roma Czech volunteers genotyped with the Axiom TM genome-wide human origins array

  Dac EGAC50000000478

• RCIDIBAPS001

  DAC created by the Research Computing platform of IDIBAPS for the submission of 2 WES (Whole exome sequencing) samples provided by Sergi Castellví-Bel

  Dac EGAC50000000466

• cfDNA whole-genome TAPS data for cancer detection DAC

  80x whole-genome sequencing data from circulating tumour DNA pre-treated with TAPS from 91 patients

  Dac EGAC50000000440

• Integrated Genomic and Transcriptomic Analysis Reveals Unique Characteristics of Hepatic Metastases and Pro-metastatic Role of Complement C1q in Pancreatic Ductal Adenocarcinoma

  Study EGAS00001004821

• Single cell sequencing reveals expanded cytotoxic CD4+ T cells and two clusters of peripheral helper T cells in synovial fluid of ACPA+ RA patients

  Study EGAS00001005241

• ITER-FIISC Data Access Committee (FPF)

  DAC for Whole-exome variant calling of individuals from the study of familial pulmonary fibrosis in the Canary Islands.

  Dac EGAC50000000473

• Baulac Lab - Paris Brain Institute

  Raw 10X single-nucleus RNA-seq data from human postoperative brain samples of patients with epilepsy and cortical malformations.

  Dac EGAC50000000546

• DAC for "Cross-species Comparison Reveals Therapeutic Vulnerabilities Halting Glioblastoma Progression" with Prof. Dr. Ana Martin-Villalba(a.martin-villalba@dkfz-heidelberg.de), Santiago Cerrizuela(s.cerrizuela@dkfz-heidelberg.de)

  Dac EGAC00001003564

• Southern African Prostate Cancer Study (SAPCS) 70 whole bloods

  new 70 germline WGS data of prostate cancer patients

  Dataset EGAD50000001626

• Ontario Institute for Cancer Research; Biliary Tract Cancer

  Next Generation Sequencing data from Biliary Tract cancers

  Study EGAS50000000972

• CRISPR_perturbations_IRF4_PRDM1_Bcells

  CRISPR perturbations of IRF4, PRDM1, and AAVS1 (within PPP1R12C gene) in activated B cells

  Dataset EGAD50000002113

• Metabolic requirements of the metastasis-initiating tumour cell population using oral squamous cell carcinoma (OSCC) as a model system

  Study EGAS00001004765

• SpainUDP Data Access Committee

  Data access committee handling data access requests for RNAseq data related to the Spanish Undiagnosed Rare Diseases Program SpainUDP cohort.

  Dac EGAC50000000932

• CEHM

  Study of the genetic and epigenetic clonal evolution of blood cancers.

  Study EGAS00001002366

• SNP array datas of 'Matched' cancer/PNE

  SNP array data of 31 Matched cancer/PNE samples

  Study EGAS00001003331

• High-resolution analysis for urinary DNA jagged ends

  High-resolution analysis for urinary DNA jagged ends

  Study EGAS00001005603

• Analysis mechanism of CD19- relapse in CARPALL study

  Whole exome sequencing of CD19- relapses in CARPALL study

  Dataset EGAD00001005195

• Immune deconvolution output

  Results of comprehensive immune deconvolution analysis through the TIMER2 web portal with algorithms specified in the publication.

  Dataset EGAD00001008789

• Transcriptomic profiling of lymphedema

  RNA-seq of skin from human subjects with and without lymphedema

  Dataset EGAD00001006246

• Cancer Alliance RNA-Seq PolyA

  PolyA selection transcriptome profiling by high-throughput for individualized cancer interpretation

  Dataset EGAD00001006234

• Molecular effects of TYK2 inhibition

  Transcriptomic profiling of skin biopsies from psoriasis patients following treatment with deucravacitinib

  Dataset EGAD00001008417

• Exome Sequencing of Gastric Cancer Samples

  We perform whole exome sequencing on 50 pairs of gastric cancer and matched normal samples.

  Dataset EGAD00001006957

• WGS data of buffy coat from CRC patients

  WGS data of buffy coat from CRC patients

  Dataset EGAD00001008352

• RBtargetedSeq

  Retinoblastoma is a rare childhood cancer of the retina. We studied retinoblastoma by Targeted Sequencing.

  Dataset EGAD00001008004

• Stage-1 meta-analysis with GC correction

  Stage-1 meta-analysis with GC correction

  Dataset EGAD00001004800

• Genentech gallbladder cancer study - exome

  Genentech gallbladder cancer study - exome

  Dataset EGAD00001004853

• Genotype of C3 SNPs in LOTx donors and recipients

  Genotype of C3 SNPs in 140 LOTx donors and recipients pairs.

  Dataset EGAD00001006889

• NABEC Exome-Seq

  Exome sequencing of North American Brain Expression Consortium (NABEC) subject.

  Dataset EGAD00001002886

• IPF Core Biopsy Study Gene Expression Data

  Matrix of gene x sample RNAseq read count data.

  Dataset EGAD00001007566

• ATAC-seq in colon normal mucosa

  ATAC-seq

  Dataset EGAD00001007690

• Whole genome sequencing

  Whole genome sequencing of 5 IM samples

  Dataset EGAD00001010157

• RNAseq samples

  20 RNAseq samples of Human CD4+ cells

  Dataset EGAD00001010182

• Exome sequencing of patients with structural brain malformations

  Exome sequencing of 12 DNA samples obtained from patients with structural brain malformations.

  Dataset EGAD00001000345

• Illumina_WGS_CONT

  Whole-genome sequencing on Illumina HiSeq2000/2500 of normal colon control tissue

  Dataset EGAD00001002083

• HipSci - Congenital Hyperinsulinia - RNA Sequencing - July 2017

  HipSci - Congenital Hyperinsulinia - RNA Sequencing - July 2017

  Dataset EGAD00001003534

• Longitudinal analysis of treatment induced genomic alterations

  Variant call set (vcf) for three (primary and two recurrent) tumors

  Dataset EGAD00001003164

• Pancreatic Cancer OICR

  ICGC DCC Release 24, PACA-CA Whole Genome sequence merged alignments

  Dataset EGAD00001003270

• The UCSF Glioblastoma Genome Project #1

  Dataset contains MeDIP-Seq, MRE-Seq and H3K4me3 ChIP-Seq data on 5 GBM patients.

  Dataset EGAD00001000777

• OT2_Solid_WXS_BL

  Whole-exome sequencing on AB 5500xl Genetic Analyzer of Blood EDTA (OT2_cohort)

  Dataset EGAD00001003385

• nccRCC Whole Exome sequencing data

  nccRCC Whole Exome sequencing data (consented samples only)

  Dataset EGAD00001001023

• Ethiopia_Genome_Project_high_coverage_vcf

  Integrated callset of high coverage Ethiopian genomes from the Pagani et al. 2015 AJHG paper (doi: http://dx.doi.org/10.1016/j.ajhg.2015.04.019)

  Dataset EGAD00001003294

• OT2_Illumina_WXS_CONT

  Whole-exome sequencing on Illumina HiSeq2000/2500 of normal colon control tissue (OT2_cohort)

  Dataset EGAD00001003378

• DSRCT RNAseq

  Desmoplastic small round cell tumor (DSRCT) RNAseq data. 14 tumor samples.

  Dataset EGAD00001003980

• mtWGDS data MS discordant twins

  Paired-end BAM files of mitochondrial whole genome deep sequencing (mtWGDS) analysis

  Dataset EGAD00001002188

• Centroblast Cohort

  miRNA-seq Cohort of 15 Benign Centroblasts

  Dataset EGAD00001001075

• Whole Genome Sequencing of acral melanoma

  Whole Genome Sequencing of 5 acral melanomas and matched normal samples

  Dataset EGAD00001000944

• High-grade meningioma sequencing data

  Whole genome, whole exome, and custom panel sequencing of high-grade meningioma cohort

  Dataset EGAD00001003220

• AI_NF1glioma_WES_control

  The dataset includes 43 matched normal samples from 43 NF1-glioma patients profiled by Whole Exome Sequencing.

  Dataset EGAD00001004374

• Renal TRACERx 100

  Custom panel sequencing data from 1714 clear cell renal cell carcinoma samples

  Dataset EGAD00001004067

• 65 prostate cancer cases transcriptome sequencing

  65 prostate cancer cases transcriptome sequencing

  Dataset EGAD00001000975

• DATA FILES FOR SJINF RNASeq

  DATA FILES FOR SJINF RNASeq

  Dataset EGAD00001001098

• Deep sequencing of melanoma for driver mutations

  Deep sequencing of melanoma for driver mutations

  Dataset EGAD00001001445

• HipSci - Embryonic Stem Cells - RNA Sequencing - April 2016

  HipSci - Embryonic Stem Cells - RNA Sequencing - April 2016

  Dataset EGAD00001002000

• Australian genomes

  Mapped data (bam files) for high-throughput whole genome sequence data for 83 modern Aboriginal Australians

  Dataset EGAD00001002001

• TSACP TruSeq Amplicon Panel dataset

  TSACP TruSeq Amplicon Panel dataset for the TraIT cell line use case

  Dataset EGAD00001002109

• HipSci - Congenital Hyperinsulinia - Exome Sequencing - July 2017

  HipSci - Congenital Hyperinsulinia - Exome Sequencing - July 2017

  Dataset EGAD00001003520

• Whole genomes from Sahel

  The dataset includes 43 high coverge (30x) whole genome samples mostly from the Sahelian belt.

  Dataset EGAD00001011812

• Reverse Capture Hi-C

  Reverse Capture Hi-C

  Dataset EGAD00001002657

• Human small intestinal macrophages whole transcriptome

  RNA sequencing data of human small intestinal macrophage subtypes

  Dataset EGAD00001002744

• Melanoma post mortem analysis

  These are 21 metastatic melanoma exomes matched with 7 germlines from 7 multisite metastatic melanoma cases.

  Dataset EGAD00001005421

• ECCO-GEN EHVol

  Inherited cardiac conditions (ICC) panel sequencing data of Egyptian healthy volunteers.

  Dataset EGAD00001006160

• GATCI whole genome sequencing fastqs

  Raw whole genome sequencing data (fastq) for the GATCI project

  Dataset EGAD00001005926

• SPECTA Lung cancer VCF files

  SPECTA Lung cancer VCF files

  Dataset EGAD00001006260

• Purple copy number segments for EGAS00001004572

  Bulk copy number segments from Purple analysis in EGAS00001004572

  Dataset EGAD00001006908

• RNA-seq of human astroblastomas

  RNA-seq for fusion gene discovery of human astroblastomas

  Dataset EGAD00001009664

• Transcriptome analysis of soft tissue sarcoma

  We characterized mRNA expression profile of soft tissue sarcomas.

  Study EGAS50000001672

• Immunopeptidomics of colorectal cancer organoids reveals a sparse HLA class I neoantigen landscape and no increase in neoantigens with interferon or MEK-inhibitor treatment

  Study EGAS00001003886

• Data Access Committee for the Nichols Group at LHSC

  Dac EGAC00001002164

• EGAD00000000011

  WTCCC1 project Autoimmune Thyroid Disease (ATD) samples

  Dataset EGAD00000000011

• EGAD00000000025

  WTCCC2 project Ulcerative Colitis (UC) samples

  Dataset EGAD00000000025

• EGAD00010000596

  PCGP Ph-likeALL GEA

  Dataset EGAD00010000596

• EGAD00010000598

  PCGP Ph-likeALL SNP6

  Dataset EGAD00010000598

• EGAD00010000610

  Samples from the Greek island of Crete, MANOLIS cohort

  Dataset EGAD00010000610

• EGAD00010000264

  WTCCC2 project samples from Ischaemic Stroke Cohort

  Dataset EGAD00010000264

• Pancreatic adenocarcinoma QCMG 20110901

  Pancreatic adenocarcinoma QCMG 20110901

  Dataset EGAD00001000049

• Genetic variation in Kuusamo

  Genetic variation in Kuusamo

  Dataset EGAD00001000055

• DATA FILES FOR NBL

  Neuroblastoma whole genome sequencing

  Dataset EGAD00001000135

• Matched Pair Cancer Cell line Whole Genomes

  Matched Pair Cancer Cell line Whole Genomes

  Dataset EGAD00001000145

• UK10K_NEURO_FSZNK REL-2012-01-13

  UK10K_NEURO_FSZNK REL-2012-01-13

  Dataset EGAD00001000183

• BRAF and MEK resistant cell line clones

  BRAF and MEK resistant cell line clones

  Dataset EGAD00001000205

• UK10K_NEURO_MUIR REL-2012-07-05

  EGAD00001000236_UK10K_NEURO_MUIR_REL_2012_07_05

  Dataset EGAD00001000236

• OLD DATA FILES FOR SJMB - Superseded by EGAD00001001864

  OLD DATA FILES FOR SJMB - Superseded by EGAD00001001864

  Dataset EGAD00001000269

• ICGC prostate cancer miRNA sequencing

  ICGC prostate cancer miRNA sequencing

  Dataset EGAD00001000304

• ICGC prostate cancer RNA sequencing

  ICGC prostate cancer RNA sequencing

  Dataset EGAD00001000305

• UK10K_NEURO_ASD_TAMPERE REL-2012-11-27

  UK10K_NEURO_ASD_TAMPERE REL-2012-11-27

  Dataset EGAD00001000314