4955 results for "*oma"

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• EGAD00010000688

  glioma normal samples using 250K

  Dataset EGAD00010000688

• dataset1

  BLUEPRINT DNA Methylation 450K data of mantle cell lymphoma

  Dataset EGAD00010001012

• Illumina_450K

  Primary renal cell carcinoma (RCC), RCC metastases and cell lines by Illumina 450K

  Dataset EGAD00010001001

• EGAD00010000756

  French glioma control germline genotypes using Illumina HumanExome-12v1_A array

  Dataset EGAD00010000756

• EGAD00010000754

  UK glioma case germline genotypes using Illumina HumanExome-12v1_A array

  Dataset EGAD00010000754

• EGAD00010000752

  German glioma case germline genotypes using Illumina HumanExome-12v1_A array

  Dataset EGAD00010000752

• EGAD00010000750

  German glioma control germline genotypes using Illumina HumanExome-12v1_A array

  Dataset EGAD00010000750

• EGAD00010000758

  French glioma case germline genotypes using Illumina HumanExome-12v1_A array

  Dataset EGAD00010000758

• EGAD00010000562

  Medulloblastoma DNA methylation

  Dataset EGAD00010000562

• EGAD00010000552

  Neuroblastoma samples

  Dataset EGAD00010000552

• EGAD00010000574

  Pleuropulmonary blastoma samples using 250K

  Dataset EGAD00010000574

• EGAD00010000584

  WTCCC2 Glaucoma samples using Illumina 670k array

  Dataset EGAD00010000584

• EGAD00010000608

  SNP6 data for seminoma samples

  Dataset EGAD00010000608

• EGAD00010000051

  Cell line derived from microdissected primary pancreatic ductal adenocarcinoma tissues

  Dataset EGAD00010000051

• EGAD00010000377

  DNA methylation analysis of 6 primary lymphoma samples

  Dataset EGAD00010000377

• EGAD00010000395

  Myeloma case sample genotype using Affymetrix SNP6.0

  Dataset EGAD00010000395

• EGAD00010000429

  DNA methylation analysis of 4 primary lymphoma samples

  Dataset EGAD00010000429

• EGAD00010000452

  Chondrosarcoma case sample genotype using Affymetrix SNP6.0

  Dataset EGAD00010000452

• EGAD00010000468

  Uveal melanoma matched Tumour and blood samples

  Dataset EGAD00010000468

• EGAD00010000488

  Chondroblastoma case sample genotype using Affymetrix SNP6.0

  Dataset EGAD00010000488

• Single-cell multiomics reveals the interplay of clonal evolution and cellular plasticity in hepatoblastoma

  Dataset EGAD00001010049

• Biallelic HMBS Inactivation Defines a Homogenous Clinico-Molecular Subtype of Hepatocellular Carcinoma

  Dataset EGAD00001009745

• Pre-neoplastic liver colonization by 11p15.5 altered mosaic cells in young children with hepatoblastoma

  Dataset EGAD00001009669

• Medulloblastoma Illumina RNA-Seq

  Illumina RNA-sequencing of Medulloblastoma primary and relapse tumor.

  Dataset EGAD00001009425

• Medulloblastoma Illumina WGS

  Illumina whole genome sequencing of Medulloblastoma Blood, Primary tumor, and Relapse tumor

  Dataset EGAD00001009424

• Medulloblastoma PDX Primary tumor

  Dataset EGAD00001009484

• Medulloblastoma Cirlce-Seq

  Circle-Seq experiment.

  Dataset EGAD00001009483

• Oesophageal adenocarcinoma scRNAseq from LUD2015-005 study (NCT02735239, EudraCT 2015-005298-19)

  This dataset contains single-cell RNA-seq generated from the LUD2015-005 study (NCT02735239, EudraCT 2015-005298-19) and additional donors with Barrett's oesophagus using the 5' Single Cell Gene Expression assay from 10x Genomics. Samples were generated from oesophageal tumours, Barrett's oesophagus, and normal oesophagus and gastric tissues, with the aim of generating a reference atlas for cell types found in normal and disease-associated tissue states in the upper GI tract. This reference atlas was used as the basis for a deconvolution workflow to estimate the cell composition of bulk transcriptomes from these tissues, and to assess cell type-specific expression patterns of potential predictive biomarkers for immunochemotherapy regimens in this setting.

  Dataset EGAD00001009401

• sc-RNA-Seq soft tissue sarcoma tumoroid biobank

  Dataset EGAD00001009002

• RNA-Seq of primary pediatric kidney tumor controls for the soft tissue sarcoma tumoroid biobank

  Dataset EGAD00001008709

• RNA-Seq soft tissue sarcoma tumoroid biobank

  Dataset EGAD00001008467

• WGS soft tissue sarcoma tumoroid biobank

  Dataset EGAD00001008466

• The T cell receptor repertoire of tumor infiltrating T cells is predictive and prognostic for cancer survival

  Transcriptomic sequencing on pre-immunotherapy melanoma patients.

  Dataset EGAD00001007710

• Multi-site tumor sampling highlights molecular intra-tumor heterogeneity in malignant pleural mesothelioma

  Dataset EGAD00001007762

• Single cell RNA-Seq of Clear Cell Sarcoma of the Kidney

  Dataset EGAD00001007498

• Immunotesting cohort with RNA-seq data of melanoma samples

  This dataset contains RNA-seq raw data in fastq format from 9 melanoma samples. The samples are formalin-fixed paraffin-embedded (FFPE) treated. For target enrichment SureSelect XT Human All Exon V6 was used. The libraries were sequenced in paired-end mode (2 x 50 nt) on a NovaSeq6000 S2 flow cell.

  Dataset EGAD00001006783

• Whole-genome sequencing of a thyroid carcinoma harboring a ETV6-NTRK3 fusion and a NTRK3 G623R mutation (HIPO-021)

  Dataset EGAD00001006243

• ChIP-Seq files for RMS.

  ChIP-Seq files accompanying the paper titled "Identification of Therapeutic Targets in Rhabdomyosarcoma Through Integrated Genomic, Epigenomic, and Proteomic Analyses".

  Dataset EGAD00001006398

• PromethION (and Illumina) WGS and MinION transcriptome for a patient with diffuse large B-cell lymphoma.

  Dataset EGAD00001006204

• Whole-genome and transcriptome sequencing of a patient with extrapancreatic acinar cell carcinoma

  Dataset EGAD00001006023

• Whole-genome and transcriptome sequencing data of an undifferentiated gastric spindle cell sarcoma

  Dataset EGAD00001006014

• scRNA-seq of glioblastoma cells alone or after co-culture with cerebral organoid cells

  Dataset EGAD00001005315

• Paired-end RNA-seq analysis of the 3D evolution of glioma cell populations. Part 1.

  Dataset includes 160 double-stranded RNAseq libraries collected from 16 patients with adult diffuse glioma. The majority of these samples were spatially-mapped during sample collection, enabling the genomic information derived from them to be mapped in 3D space.

  Dataset EGAD00001005222

• Paired-end Whole Exome-seq analysis of the 3D evolution of glioma cell populations. Part 1.

  Dataset contains Exome sequencing data (aligned and base quality score recalibrated BAM files) for 236 tumor samples + matched normal from blood, collected from 21 patients with adult diffuse glioma. The majority of these samples were spatially-mapped during sample collection, enabling the genomic information derived from them to be mapped in 3D space.

  Dataset EGAD00001005221

• Transcriptome of Ewing sarcoma tumors - RNA-seq (ICGC)

  Transcriptome of Ewing sarcoma tumors (ICGC project). Fastq files of 57 RNA-seq are available (2x101bp).

  Dataset EGAD00001004493

• Identification of molecular subgroups in multiple myeloma by whole exome sequencing.

  Dataset EGAD00001004408

• Whole Genome Sequencing of HCC

  The present series corresponds to 24 whole genome sequencing (12 Tumoral/Non-tumoral pairs). Hepatocellular carcinoma (HCC) accounts for more than 90% of liver cancers, and is a major health problem. It is the 3rd cause of cancer-related mortality. Advances in genomic analyses have formed a comprehensive understanding of different underlying pathobiological layers resulting in hepatocarcinogenesis. Thus, the development of next-generation sequencing technologies has made it possible to generate more comprehensive catalogues of somatic alteration events (single nucleotide substitutions, structural variations, and epigenetic changes) in liver cancer genome than ever before.

  Dataset EGAD00001003994

• Whole exome sequencing data from two patients with isolated myelosarcoma followed by acute myeloid leukemia

  Dataset EGAD00001003831

• RNA-SEQ data from 13 CAF (Cancer Associated Fibroblast) samples sorted from fresh high-grade ovarian carcinoma

  Dataset EGAD00001003460

• Raw sequencing data - Intra-tumor heterogeneity and clonal evolution patterns towards platinum-resistant high-grade serous ovarian cancer

  This dataset includes 69 sampels of whole-exome sequencing data of high-grade serous ovarian carcinoma (HGSOC). We included patients with advanced (International Federation of Gynecology and bstetrics [FIGO] stage IIIeIV) HGSOC for which biopsies were obtained during debulking surgery, the first at initial diagnosis and the second at disease relapse. Where possible, matched normal DNA from each participating patient was obtained from a whole-blood sample. Written informed consent was obtained from all patients and approved by the local ethics committee.

  Dataset EGAD00001001381