22938 results for "ega"

in 68.97 milliseconds.

• chr2_allsamples_imputated

  Chromosome 2 imputed genotypes of samples genotyped on the Axiom Human Genotyping SARS-CoV-2 array (GRCh38)

  Dataset EGAD00010002523

• chr19_allsamples_imputated

  Chromosome 19 imputed genotypes of samples genotyped on the Axiom Human Genotyping SARS-CoV-2 array (GRCh38)

  Dataset EGAD00010002524

• chr1_allsamples_imputated

  Chromosome 1 imputed genotypes of samples genotyped on the Axiom Human Genotyping SARS-CoV-2 array (GRCh38)

  Dataset EGAD00010002525

• LOPEZ_2019.vcf.gz

  Genotype data for new samples in Lopez et al 2021

  Dataset EGAD00010002100

• MalariaGEN case-control study in the Gambia

  MalariaGEN case-control study in the Gambia.

  Study EGAS00000000026

• Inherited Corneal Dystrophies - Institute of Ophthalmology, University College London (IoO, UCL)

  DAC created for access to data published by Dr. Alice E Davidson

  Dac EGAC50000000213

• ITER-FIISC Data Access Committee

  DAC for whole-genome variant calling data of individuals from the study of allergic diseases in the Canary Islands.

  Dac EGAC50000000180

• RNAseq for 190 AML patients

  This dataset contains 190 fastq files sequenced with Illumina HiSeq500.

  Dataset EGAD50000000490

• AfricanNeo_F dataset

  Dataset: AfricanNeo_F; genotyping batch: OE-0808_150625; array: Illumina Omni2.5-Octo BeadChip.

  Dataset EGAD50000000007

• bulk RNA-seq data

  a total number of 99 bulk RNA-seq lymphoma samples

  Dataset EGAD50000000631

• resistance to FGFR inhibitor in FGR2 cancers from DNA sequencing

  WES from FGR2 resistant patient tumors

  Study EGAS50000000305

• Heart

  Whole-Exome-Sequencing of 5 pooled patients for SNP-based demultiplexing

  Study EGAS50000000655

• Colorectal cancer functional annotation - RNAseq

  RNA-seq data from multiple colorectal cancer cell lines

  Study EGAS50000000208

• Single nuclei sequencing (snRNA-seq) of patient tumours

  snRNA-seq was performed on patient samples

  Study EGAS50000000617

• High throughput profiling of undifferentiated pleomorphic sarcomas identifies two main subgroups with distinct immune contexture, clinical outcome and sensitivity to targeted therapies

  Study EGAS00001004612

• Mutation and Microsatellite Burden Predict Response to PD-1 Inhibition in Children with Germline DNA Replication Repair Deficiency: An Observational Registry Study

  Study EGAS00001005579

• Circulating tumor DNA, pathological and immunologic responses to neoadjuvant nivolumab or nivolumab plus relatlimab and chemoradiotherapy in resectable esophageal/gastroesophageal junction cancer

  Study EGAS00001007299

• Single-cell multi-omics defines the cell-type-specific impact of splicing aberrations in human hematopoietic clonal outgrowths

  Study EGAS00001007402

• LAM-HTGTS dataset

  LAM-HTGTS dataset after DIS3 ASO or Control ASO treatment on human cells under plasmablast differentiation.

  Dataset EGAD50000001242

• PREGO reference panel - 3234 individuals from Western France. Individuals' birthplaces are available in epsg.io/2154 (RGF93 v1 / Lambert-93 -- France) coordinates.

  Study EGAS00001007764

• sc-RNA-Seq soft tissue sarcoma tumoroid biobank

  Dataset EGAD00001009002

• Mechanism of Decitabine response in MDS/AML patients

  Data access agreement for access to scRNASeq data of serial AML/MDS patients undergoing decitabine treatment.

  Dac EGAC50000000550

• UTSW KCP DAC

  This DAC manages access to WES and RNA-Seq data from studies approved under the IRBs of KCP principal investigators.

  Dac EGAC50000000203

• WES in Angolan and Cape Verdean triple-negative breast cancer samples

  WES in 23 Angolan and 7 Cape Verdean triple-negative breast cancer samples

  Dac EGAC50000000486

• Clonotype Analysis Data

  This dataset includes: amplicon sequencing data for a total of 3 BCP-ALL patients - fastq files

  Dataset EGAD50000001518

• BCG prime DNA methylation data

  This dataset contains the DNA methylation data of 384 samples from individuals with one or more comorbidities

  Dataset EGAD00010002767

• Ovarian subtypes tumor methylation data

  This dataset contains ovarian endometriod and ovarian, stomach, pancreatic and colorectal mucinous tumor tissue samples

  Dataset EGAD00010002773

• Exome sequencing for identifying point mutations driving M haemophilum susceptibility

  To understand non tuberculous Mycobacterial susceptibility

  Study EGAS50000001076

• cfDNA shallow Whole-Genome sequencing - healthy donors

  sWGS of the blood samples from 14 (fourteen) healthy donors

  Dataset EGAD50000001860

• SiMSen‑Seq

  High resolution amplicon-bases sequencing o screen for PIK3CA hot spot mutations

  Dataset EGAD50000001668

• DNAme of pancreatic neuroendocrine tumors mutated in MEN1/DAXX/ ATRX

  primary pancreatic neuroendocrine tumors mutated in Menin, DAXX or ATRX

  Dataset EGAD00010002784

• CFTR Gene Variant Detection in Moroccan Individuals via Nanopore Long-Read Sequencing

  This is data from LRS of CFTR gene on CF Moroccan patients

  Dac EGAC50000000815

• endogene.bio

  The Endogene Bio Data Access Committee oversees and manages access to controlled genomic and clinical datasets deposited by the Endogene Bio research team.

  Dac EGAC50000000786

• FFPE_Normal_Panel_V3_Cancer_Panel

  FFPE normal panel generation for use with V3 cancer panel 0618521

  Study EGAS00001000836

• Otosclerosis_gene_discovery_

  DNA from patients with otosclerosis will be subjected to exome sequencing

  Study EGAS00001000156

• SHH medulloblastoma samples

  Sequencing data of human SHH medulloblastoma samples

  Study EGAS00001000607

• Breast_Heterogeneity_Validation

  Validation of subs and indels called in breast whole genome studies

  Study EGAS00001001972

• Whole Exome Sequencing of Permanent Neonatal Diabetes Patients

  Whole Exome Sequencing of Permanent Neonatal Diabetes Patients

  Study EGAS00001000047

• Cloning_of_the_breakpoint_of_a_novel_translocation_associated_with_T_acute_lymphoblastic_leukaemia

  Single case of T-ALL carrying t(4;6), a novel translocation.

  Study EGAS00001000520

• ICR MOPOPGEN UK exome control series

  BAM files of individuals from the 1958BC aligned to hg17

  Dataset EGAD00001004396

• HipSci - Embryonic Stem Cells - Exome Sequencing - April 2016

  HipSci - Embryonic Stem Cells - Exome Sequencing - April 2016

  Dataset EGAD00001001999

• Reference epigenome OB56_N_PreA_WGBS data generated from KEP study

  A OB56_N_PreA_WGBS paired end data for Preadipocytes(fat)

  Dataset EGAD00001003479

• IRF5 HL RNASeq dataset

  bam files associated with the study EGAS00001001205

  Dataset EGAD00001001417

• Pipeline study - RNAseq dataset

  Fernandez-Cuesta et al., RNAseq data Pipline

  Dataset EGAD00001000746

• DREAM SMC-HET - WGS mapped reads

  ICGC-TCGA DREAM Somatic Mutation Calling - Tumour Heterogeneity Challenge - WGS mapped reads

  Dataset EGAD00001003971

• Landscape of AL mutations

  Exome Sequencing to Define the Landscape of Plasma Cells in Systemic Light chain Amyloidosis

  Dataset EGAD00001001861

• Illumina_WXS_CONT

  Whole-exome sequencing on Illumina HiSeq2000/2500 of normal colon control tissue

  Dataset EGAD00001002094

• WGS of Asian lung cancers

  VCF files of somatic variants from tumor-normal pairs of Asian lung cancer patients

  Dataset EGAD00001001240

• OT2_Illumina_WGS_BL

  Whole-genome sequencing on Illumina HiSeq2000/2500 of Blood EDTA (OT2_cohort)

  Dataset EGAD00001003370

• Oxford Nanopore sequencing for APL

  Raw fast5 file of Oxford Nanopore sequencing for an APL patient sample

  Dataset EGAD00001008151

• MDS 5q- exome reads

  Cancer exome reads consisting of FASTQ paired end reads from bone marrow samples

  Dataset EGAD00001001058

• Microsatellite unstable colorectal cancers

  Mapped data for 10 Colon MSI cancer samples

  Dataset EGAD00001004500

• MDS Sequential Treatment Validation

  Validations of variants identified by exome sequencing in sequential samples derived after treatment cycle with AZA.

  Dataset EGAD00001000949

• IMpower133 subtype assignments

  This dataset contains subtype assignments for 271 tumor samples profiled by RNA-seq.

  Dataset EGAD00001006926

• Solid_WXS_BL

  Whole-exome sequencing on AB 5500xl Genetic Analyzer of Blood EDTA

  Dataset EGAD00001002104

• Disorders of growth and insulin action

  Illumina paired-end sequencing of whole- exome pulldown DNA from Severe Insulin Resistant patients.

  Dataset EGAD00001000381

• Target sequencing of myxofibrosarcoma

  Target sequencing (fastq files) of 99 pairs (198 samples) of myxofibrosarcoma

  Dataset EGAD00001004101

• AI_NF1glioma_WES

  The dataset includes 59 tumor samples from 56 NF1-glioma patients profiled by Whole Exome Sequencing.

  Dataset EGAD00001004375

• Tracing the origins of relapse in AML to stem cells

  Aligned whole genome sequence from AML relapse project

  Dataset EGAD00001003234

• snv calls for subclonal reconstruction

  single nucleotide variant calls from somatic sniper, vcf format. input for subclonal reconstruction

  Dataset EGAD00001003753

• RNA sequencing of myxofibrosarcoma

  RNA sequencing (fastq files) of 29 samples of myxofibrosarcoma

  Dataset EGAD00001004102

• Exome sequencing Parkinson's disease patients

  In this project we will sequence the exomes of 250 patients with Parkinson's disease

  Dataset EGAD00001000405

• Targeted gene screen of drug resistant organoids

  Sequencing of drug resistant organoids

  Dataset EGAD00001003252

• Multisample2 Amplicon

  Amplicon data of tumor samples generated for validation of WES findings and further sub clonal mapping

  Dataset EGAD00001004020

• Familial CEBPA-mutated AML whole exome sequencing dataset

  Whole exome sequencing data for AML and matched normal samples

  Dataset EGAD00001000996

• Whole exome sequencing of myxofibrosarcoma

  Whole exome sequencing (fastq files) of 41 pairs (82 samples) of myxofibrosarcoma

  Dataset EGAD00001004095

• UROMOL 2020 - RNA-seq data for validation

  Total RNAseq data from 47 patients with NMIBC.

  Study EGAS00001005050

• LLNEXT Pilot MGS sequencing

  This dataset contains sequencing data from fecal microbiome from LLNEXT project

  Dataset EGAD00001011293

• Nasal brushes analysis

  scRNA-seq samples from healthy and asthma donors part 1.

  Study EGAS00001006657

• ORIENT study

  scRNAseq dataset containing 5 healthy donors and 4 asthmatic donors.

  Dataset EGAD00001009687

• Metadata file

  "Master" file of patient clinical characteristics and outcomes, samples, and the results of certain analyses, including immunohistochemistry.

  Dataset EGAD00001008792

• WXS files for MATCH paper

  WXS files for paper titled "Preclinical Pediatric Molecular Analysis for Therapy Choice (MATCH)"

  Dataset EGAD00001015484

• RRBS melanoma biopsies

  RRBS data for melanoma biopsies at baseline and after treatment

  Dataset EGAD00001009060

• RNASeq files for Stewart-MATCH

  RNASeq files for paper titled "Preclinical Pediatric Molecular Analysis for Therapy Choice (MATCH)"

  Dataset EGAD00001015475

• RPPA analysis + clinical data

  RPPA analysis from FAIRLANE Trial of Neoadjuvant Ipatasertib Plus Paclitaxel for Triple-Negative Breast Cancer.

  Dataset EGAD00001008507

• DATA FILES FOR SJLGG

  DATA FILES FOR SJLGG

  Dataset EGAD00001000695

• Seminoma exome sequencing

  Exome sequencing data for 8 pairs of seminomas and matched normal

  Dataset EGAD00001001002

• LGG Epilepsy Cohort WGS

  LGG Epilepsy Cohort WGS

  Dataset EGAD00001001664

• LGG Epilepsy Cohort WXS

  LGG Epilepsy Cohort WXS

  Dataset EGAD00001001665

• Osteosarcoma exome sequencing dataset

  Whole exome sequencing data of primary, secondary and tertiary tumor from a patient.

  Dataset EGAD00001002145

• Characterization of HCV-specific CD4 T cells during DAA-Therapy

  To be added...

  Dataset EGAD00001005432

• Melanoma multi site metastases

  These are caveman, pindel, battenberg and brass calls for index patients' metastatic melanoma genomes within this study.

  Dataset EGAD00001005483

• KRAS Mutations in Multiple Myeloma

  Fastq files for 80 Multiple Myeloma Patients and 12 cell-lines

  Dataset EGAD00001005743

• Proteome data

  Proteome data of neuroblastoma patients

  Dataset EGAD00001006737

• Global Anaplastic Thyroid Cancer Initiative

  Raw whole genome sequence data(fastq) for the GATCI project

  Dataset EGAD00001003236

• Plasma DNA motif analysis

  Plasma DNA motif analysis

  Study EGAS00001003409

• Data Access Committee for the DNA sequencing data included in the study "A generalizable machine learning framework for classifying DNA repair defects using ctDNA exomes”

  Dac EGAC00001003111

• African Partnership for Chronic Disease Research (APCDR) DAC

  Dac EGAC00001000237

• Data Access Committee of DKFZ-Epigenomics

  Dac EGAC00001000279

• DAC for the Study EGAS00001006374: Pathogenic variants damage cell composition and single cell transcription in cardiomyopathies. snRNAseq of 79 (61 CM patients + 18 controls).

  Dac EGAC00001002804

• EGAD00000000010

  WTCCC1 project Ankylosing Spondylitis (AS) samples

  Dataset EGAD00000000010

• EGAD00000000013

  WTCCC1 project Breast cancer (BC) samples

  Dataset EGAD00000000013

• EGAD00000000049

  RNA-SEQ data from oestrogen-receptor-alpha-positive metastatic lobular breast cancer sample

  Dataset EGAD00000000049

• EGAD00010000636

  WTCCC2 Visceral Leishmaniasis samples from Brazil using Illumina 670k

  Dataset EGAD00010000636

• EGAD00010000638

  WTCCC2 Visceral Leishmaniasis samples from Indial using Illumina 670k

  Dataset EGAD00010000638

• EGAD00010000640

  WTCCC2 Visceral Leishmaniasis samples from Sudanl using Illumina 670k

  Dataset EGAD00010000640

• EGAD00010000674

  ELSA genome-wide genotypes, excluding estimated related individuals. There are 3 files: .fam, .bim, .bed

  Dataset EGAD00010000674

• EGAD00010000676

  ELSA genome-wide genotypes, including estimated related individuals. There are 3 files: .fam, .bim, .bed

  Dataset EGAD00010000676

• EGAD00010000294

  1958BC control samples only (Hap300)

  Dataset EGAD00010000294

• EGAD00010000236

  WTCCC2 samples from Coronary Artery Disease Cohort

  Dataset EGAD00010000236

• EGAD00010000286

  All cases and controls (Hap550)

  Dataset EGAD00010000286

• EGAD00010000290

  NBS control samples only (Hap550)

  Dataset EGAD00010000290

• EGAD00010000298

  All cases and controls (Hap300)

  Dataset EGAD00010000298

• EGAD00010000450

  Genome Wide Genotype Data

  Dataset EGAD00010000450

• EGAD00010000486

  ccRCC case samples using expression array

  Dataset EGAD00010000486

• EGAD00010000496

  Genome-wide SNP genotyping of African rainforest hunter-gatherers and neighbouring agriculturalists

  Dataset EGAD00010000496

• "SNV detection from formalin fixed paraffin embedded (FFPE) samples"

  "SNV detection from formalin fixed paraffin embedded (FFPE) samples"

  Dataset EGAD00001000033

• "Usage of small amounts of DNA for Illumina sequencing"

  "Usage of small amounts of DNA for Illumina sequencing"

  Dataset EGAD00001000034

• Cell Line Sub Clone Rearrangement Screen

  Cell Line Sub Clone Rearrangement Screen

  Dataset EGAD00001000064

• Non Tumour Renal Cell Line Sequencing

  Non Tumour Renal Cell Line Sequencing

  Dataset EGAD00001000091

• Identifying Novel Fusion Genes in Myeloma

  Identifying Novel Fusion Genes in Myeloma

  Dataset EGAD00001000112

• AML targeted resequencing study

  AML targeted resequencing study

  Dataset EGAD00001000253

• Plasma DNA tissue mapping by genome-wide methylation sequencing for noninvasive prenatal, cancer, and transplantation assessments

  Dataset EGAD00001001602

• 450K_DKFZ_CLL_NB

  CLL and normal B cell samples using 450K

  Dataset EGAD00010000871

• ICGC_450k

  Medulloblastoma methylation profiling

  Dataset EGAD00010001323

• Second generation noninvasive fetal genome analysis reveals de novo mutations, single-base parental inheritance, and preferred DNA ends

  Dataset EGAD00001003778

• HPAH Genotyping data

  Genotyping data for 32 individuals from a family affected by HPAH

  Dataset EGAD00010001633

• WTCCC2 Pre-eclampsia

  Genotype data from the Affymetrix 6.0 platform for 4,375 Colombian pre-eclampsia cases and controls

  Dataset EGAD00010001647

• Complete sequencing dataset of study EGAS00001002795

  Dataset EGAD00001004572

• APCDR AGV Fula

  APCDR AGV Project: Array data from 74 Fula

  Dataset EGAD00010001054

• RNA-seq data from 7 CAF-S1 primary cell lines isolated from breast Cancer

  Dataset EGAD00001006144