-
March 2017 data update (bam/fastq) (containing H3K27ac for CEMT_87, RNA-Seq for CEMT_141, CEMT_142, CEMT_145, CEMT_146, H3K27me3, H3K9me3, H3K4me3, H3K4me1, ChIP-Seq Input for CEMT_88, CEMT_90 and CEMT_91) for reference epigenomes generated at Centre for Epigenome Mapping Technologies, Genome Sciences Center, B.C. Cancer Agency as part of the International Human Epigenome Consortium.
Dataset
EGAD00001003272
-
In this study single cell RNA-Seq data was used to train a deconvolution algorithm. The algorithm was validated on paired bulk RNA-Seq profiles.
Dataset
EGAD00001009688
-
van Hijfte GBM dataset 2022/A (single-nucleus RNA-seq)
Study
EGAS00001006920
-
A Genomic Approach to Improved Diagnosis and Treatment of Neuroendocrine Tumors
Study
phs001772
-
Comparison of capture-based method for transcriptome profiling of formalin-fixed paraffin embedded tumor samples
Study
EGAS00001005255
-
CASCADE tumour transcriptome data
Dataset
EGAD00001009492
-
RNA-seq analysis of human primary keratinocytes and skin
Study
EGAS00001002981
-
SF10127 snRNA-Seq Primary GBM
Dataset
EGAD00001005403
-
SF12264 snRNA-Seq Primary GBM
Dataset
EGAD00001005410
-
Leiomyosarcoma Cancer Transcriptome Sequencing
Dataset
EGAD00001003192
-
Expressed Pseudogenes in the Transcriptional Landscape of Human Cancers
Study
phs000525
-
bulk RNA-seq of the 5 HCC patients which also have the single cell T cell RNA-seq data
Dataset
EGAD00001004148
-
Hereditary Gastric Cancer Syndromes: An Integrated Genomic and Clinicopathologic Study of the Predisposition to Gastric Cancer
Study
phs003422
-
Response and Resistance to ER-Directed Therapy in Metastatic Breast Cancer
Study
phs001285
-
Bulk RNA data from Wilms Tumors
Study
EGAS00001006531
-
SF4400 snRNA-Seq Primary GBM
Dataset
EGAD00001005399
-
SF9259R snRNA-Seq Primary GBM
Dataset
EGAD00001005401
-
SF6996 snRNA-Seq Primary GBM
Dataset
EGAD00001005402
-
SF10022 snRNA-Seq Primary High-grade Glioma
Dataset
EGAD00001005409
-
SF12090 snRNA-Seq IDHR132H Wild-type Primary GBM Male
Dataset
EGAD00001005412
-
SF4297 snRNA-Seq Primary GBM
Dataset
EGAD00001005415
-
Glioblastoma stem cell lines RNA-seq data
Dataset
EGAD00001006195
-
WCDT deep RNA-seq
Dataset
EGAD00001008799
-
Clinical genome sequencing uncovers potentially targetable truncations and fusions of MAP3K8 in spitzoid and other melanomas
Study
EGAS00001003430
-
RNA-seq, ChIP-seq, ATAC-seq files for PCGP SJERG
Dataset
EGAD00001002681
-
SF11979 scRNA-Seq Primary GBM IDHR132H Wild-type Female
Dataset
EGAD00001005390
-
SF11977 scRNA-Seq Primary GBM IDHR132H Wildtype Female
Dataset
EGAD00001005391
-
SF11964 scRNA-Seq Low Grade Glioma IDHR132H mutant Male
Dataset
EGAD00001005396
-
Genomic and Transcriptomic Profiling of Patients with Malignant Pleural and Peritoneal Mesothelioma: The NCI Cohort
Study
phs002207
-
RNA-Seq-Dataset
Dataset
EGAD00001000043
-
RNA-Seq analysis
Dataset
EGAD00001000057
-
BELOB: Ribo-minus RNA-seq data corresponding to 96x GBM samples from the BELOB trial.
Study
EGAS00001004570
-
Bulk and single cell RNA-seq analysis of keratinocytes and human skin
Dataset
EGAD00001005998
-
The UC San Diego Chronic Lymphocytic Leukemia (CLL) Study
Study
phs000767
-
Regulatory Changes in Glioblastoma Brain Tumors and Xenografts Wave 1
Study
phs001646
-
CRUK Accelerator: oesophageal adenocarcinoma whole exome and RNA-seq raw sequencing data
Dataset
EGAD00001008489
-
Resistance studies in Lung Cancer
Study
phs000855
-
Comprehensive peripheral blood immunoprofiling reveals five immunotypes with immunotherapy response characteristics in cancer patients
Study
EGAS50000000286
-
Gene signature for predicting homologous recombination deficiency in triple-negative breast cancer
Study
EGAS00001006518
-
Metastases of a cancer of unknown primary (CUP)
Dataset
EGAD00001005963
-
RNA-seq
Dataset
EGAD00001011376
-
Inference_of_B_cell_clonality_and_function_from_single_cell_RNA_seq_data
Study
EGAS00001002963
-
Breast Cancer - immune clusters - RNA-seq
Dataset
EGAD00001004985
-
Whole exome sequencing of advanced gastric cancer
Dataset
EGAD00001005740
-
glioblastoma and glioblastoma stem cells (GSCs), RNA-seq and WGS
Study
EGAS00001004395
-
The application of RNA sequencing for the diagnosis and genomic classification of pediatric acute lymphoblastic leukemia
Study
EGAS00001004212
-
SF11136 scRNA-Seq Primary astrocytoma IDH mutant
Dataset
EGAD00001005394
-
small RNA-Seq and RNA-Seq of cortical tubers from sufferers of tuberous sclerosis complex
Dac
EGAC00001000672
-
Clinical Cancer Genomic Profiling by Three-Platform Sequencing of Whole Genome, Whole Exome and Transcriptome
Study
EGAS00001002217
-
Small-RNA sequencing of pheochromocytoma and paraganglioma arising from germline SDHB mutations
Dataset
EGAD50000000501
-
Whole Genome Sequencing of HCC
Study
EGAS00001002888
-
H3K27ac ChIP-seq and RNA-seq of lung neuroendocrine tumors
Dataset
EGAD50000000083
-
Comprehensive genomic characterization of early stage bladder cancer - Total RNA-seq data
Study
EGAS50000000512
-
Single cell RNA sequencing of colorectal cancer patients (KUL3/KUL5)
Study
EGAS00001006049
-
RNA-seq
Dataset
EGAD00001001862
-
Bulk RNA-seq
Dataset
EGAD50000000135
-
RNA-seq data from iCAF (sorted) and myCAF cluster 0 (spread) CAF-S1 fibroblasts maintained in culture
Study
EGAS00001004031
-
Microsatellite instability at U2AF-binding polypyrimidic tract sites perturbs alternative splicing during colorectal cancer initiation
Study
EGAS00001004863
-
Evaluation of triple negative breast cancer with heterogeneous immune infiltration
Dataset
EGAD00001010280
-
RNA-Seq dataset for Genomic rearrangements in Pediatric Cancer
Dataset
EGAD00001008152
-
Esophageal Adenocarcinoma Organoid Genomics
Study
EGAS00001005224
-
RNA-seq bam
Study
EGAS00001005161
-
Study of Leukemia Stem Cells in B-ALL
Study
phs002492
-
RNA-seq from human embryonic tissues (pancreas_2, tongue_2)
Dataset
EGAD00001005115
-
RNA-seq
Dataset
EGAD00001008995
-
Nrf2 transcript alterations
Study
EGAS00001001740
-
DNA and RNA Profiling Using Simultaneous Sequencing (Simul-seq)
Study
phs001214
-
Integrative Analysis for Multi-Omics Data in Non-Small-Cell Lung Cancer
Study
phs003113
-
Genomic profiling of subcutaneous patient derived xenograft models of solid childhood cancer
Dataset
EGAD00001009863
-
CCA RNA-seq data (60 CCA, 6 normal, 16 cell-line)
Dataset
EGAD00001011998
-
RNA-seq of Ewing sarcoma tumors (ICGC)
Study
EGAS00001003333
-
Bulk and single-cell AML RNA-seq post ex vivo culture
Study
EGAS00001006265
-
Verification of BCR reconstruction from single-cell RNA-seq using BraCeR
Dataset
EGAD00001004199
-
Identification of point mutations, expression perturbations, and gene fusions in T-cell acute lymphoblastic leukemia by RNA-seq
Study
EGAS00001000536
-
RNAseq from 6 organotypic co-cultures (OC cells bulk/OCSC with or without TME)
Dataset
EGAD50000000523
-
RNA-seq data for NRF2 study
Dataset
EGAD00001002243
-
Transcriptome of insulinomas
Study
EGAS50000000320
-
Molecular Profiling Reveals Unique Immune and Metabolic Features of Melanoma Brain Metastases. Cancer Discovery doi: 10.1158/2159-8290. PMID: 30787016 PMCID: PMC6497554
Dataset
EGAD00001005046
-
Additional RNA-seq, ChIP-seq, and ATAC-seq files for PCGP SJERG
Dataset
EGAD00001002654
-
RNAseq of 12q-amplified osteosarcomas
Study
EGAS50000000494
-
WES, sWGS and RNA-seq of Asian breast cancer
Dataset
EGAD00001006399
-
Epigenomic data of Human muscle stem cell
Study
EGAS00001006159
-
RNA-Seq and WXS from 6 glioblastoma patients
Dataset
EGAD00001003293
-
RNA-Seq data for Juvenile Pilocytic Astrocytomas
Dataset
EGAD00001009043
-
RNA-seq in insulinomas
Dataset
EGAD50000000462
-
Paired RNA-Seq of fCAB treated and bisulfite treated VDH01, partly depleted for NSUN3
Dataset
EGAD00001008742
-
Single-Cell RNA-Sequencing of Human Prostatectomy Tissue
Study
phs003480
-
Control samples, breast cancer clinical samples and matched patient-derived tumour xenografts (PDTXs) to develop and test a computational approach to discriminate human and mouse sequences in PDTXs
Study
EGAS00001002445
-
RNA-seq Revision
Dataset
EGAD00001008951
-
Paired-end RNA-seq analysis of GBM, additional patient.
Dataset
EGAD00001011990
-
bulk RNA-seq data
Dataset
EGAD50000000631
-
Short-read (RNA-seq)
Dataset
EGAD00001006596
-
Sputum RNA-Seq from Asthmatic Patients for Microbes and Genes
Study
phs002224
-
RNA-seq dataset
Dataset
EGAD00001007685
-
LGG Epilepsy Cohort RNA-Seq
Dataset
EGAD00001001666
-
CD4 T-Cell RNA-Seq
Dataset
EGAD00001002687
-
RNA-seq
Dataset
EGAD00001008959
-
RNA-seq of human astroblastomas
Dataset
EGAD00001009664
-
Lung Adenocarcinoma Promotion by Air Pollutants
Study
EGAS00001006951
-
The Role of ZEB2 during Human Neural Crest Cell Formation
Study
phs002701